New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4231923	41 (0.800)	4 (0.080)	3/256	NT	9.3%	coding (1311/1350 nt)	lysC	aspartate kinase III
	?	NC_000913	= 4231939	38 (0.760)					coding (1295/1350 nt)	lysC	aspartate kinase III

TCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4231780‑4231923 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCGAAGATGCCGAGCAG  <  NC_000913/4231939‑4231920                                                                                                                                                                      TCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATCAGCATAGTGACAAGAAAATCACTACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTGAAACAAATAACATTGAAGTTTTTACACAACATG                       >  1:315629/1‑143                      CAGAGTACAGGCTGGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAACTTACTATGCAGTTTTTGCACCACCTGCCCGGCGAAGATGCCGAGCAG  <  1:263455/143‑1                      CAGAGTACAGGCTCGGTTATTGAGGAGCATAGTGACAAGCACCTGCCTCCCCCCCCAAACATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCCCGGCGAAGATGCCGAGCAG  <  1:692710/143‑1                                                                                                                      TTACTATGCAGTTTTTGCACCACCTGCCCGGCGAAGATGCCGAGC    <  1:546744/45‑1                                                                                                                      TTACTATGCAGTTTTTGCACCACCTGCCCGGCGAAGATGCCGAGC    >  2:546744/1‑45                                                                                                                                                                      TCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4231780‑4231923 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCCGGCGAAGATGCCGAGCAG  <  NC_000913/4231939‑4231920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.