New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2556158 | 49 (1.070) | 3 (0.070) | 3/252 | NT | 5.9% | coding (243/660 nt) | eutL | putative structural protein, ethanolamine utilization microcompartment |
? | NC_000913 | = 2556163 | 49 (1.120) | coding (238/660 nt) | eutL | putative structural protein, ethanolamine utilization microcompartment |
TCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2556048‑2556158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTGG < NC_000913/2556163‑2556025 TCATTAGCCCACGGGAAAGCGGCCCCATGTTCAAGATGCGCAATCATCGCATCCAGACCTGCACGCACTGCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGG < 2:313212/143‑1 CCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGC < 1:604791/121‑1 CCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGC > 2:604791/1‑121 cagCGACTGCCGGTGGTGTGCTGATTGTGCTTTGTGGGCCAAGCCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTG < 2:345010/140‑1 agCGACTGCCGGGGAAGTGCTGAGTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTGG < 1:597053/141‑1 ACCGACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTGTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCGTGG > 1:373263/1‑143 TCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2556048‑2556158 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaccgACTGCCGGTGAAGTGCTGATTATGCTTGGTGGGCCAAACCCGGCGGAAGTGCGTGCAGGTCTGGATGCGATGATTGCGCATATTGAAAATGGCGCAGCTTTCCAGTGGGCTAATGACGCGCAAGATACGGCATTCCTGG < NC_000913/2556163‑2556025 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |