New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2556158	49 (1.070)	3 (0.070)	3/252	NT	5.9%	coding (243/660 nt)	eutL	putative structural protein, ethanolamine utilization microcompartment
	?	NC_000913	= 2556163	49 (1.120)					coding (238/660 nt)	eutL	putative structural protein, ethanolamine utilization microcompartment

CCAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGACCGAGGCTACGAATA  >  NC_000913/2556025‑2556302                                                                                                                                           |                                                                                                                                            ccAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATACTCAGCACTTCCCCGGCAGTcgct                                                                                                                                         <  1:597053‑M2/143‑5 (MQ=255) ccACGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGACAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggt                                                                                                                                         >  1:373263‑M2/1‑139 (MQ=255)  cAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGCTTGGCCCACAAAGCACAATCAGCACACCACCGGCAGTcgctg                                                                                                                                        <  2:345010‑M2/143‑6 (MQ=255)       aTGCCGTACCTTGCGCGTCAGTAGCCCACTGGACAGCTGCGCCATTTTCAATATGCGCAATCAGCGCACCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACggg                                                                                                                                   <  2:696729/143‑1 (MQ=255)        tGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCGGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGc                                                                                                                                  <  2:131885/143‑1 (MQ=255)           cGTATCTCGCCCGTCATCAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCgt                                                                                                                               <  1:215450/143‑1 (MQ=255)            gTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTGCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCgtg                                                                                                                              <  2:90633/143‑1 (MQ=255)             tATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAACCATCGCATCCAGACCTGCACGCACGTCCGCCGGGTTTGGGCCACCAACCATAATCAGCACCTCACCGGCAGTCGGTGACGAGCCggac                                                                                                                             >  2:436619/1‑140 (MQ=255)                cTTGCGCGTCATTAGCCCACGGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCa                                                                                                                          <  1:677348/143‑1 (MQ=255)                       gTCATCAGCCCACTGGAAAGCTGCGCCATTTTCAATAGGCGCAATCATCGCATCCAGACCCGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCg                                                                                                                   <  1:491256/143‑1 (MQ=255)                        tcctgaGCCCACTTGGAGGCTGCTCCATTTTCAATATGCGCAATCATCGCCTCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGc                                                                                                                  <  2:784624/138‑1 (MQ=255)                        tCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGAGGGGCCGTGTGCAGAGCCCgg                                                                                                                  >  1:187658/1‑142 (MQ=255)                          aTTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCat                                                                                                                >  1:541385/1‑143 (MQ=255)                               cccACTGGAAAGCTGCGCCACTTTCAATATGCGCAATCCTCGCATCCAGCCCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagc                                                                                                           <  1:716543/143‑1 (MQ=255)                                 cACTGGAACTCTTCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGTGTTTGGCCCACCAGGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagcga                                                                                                         <  2:736830/143‑1 (MQ=255)                                  aCTGGAAAGCTGCGCCATTTTCAATAAGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCACCCGCATCTagcgcg                                                                                                        >  2:871529/1‑141 (MQ=255)                                    tGGAAAGCTGCGCCATTTTCAATCTGCGCGATCTTTTCTCCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagcgagcg                                                                                                      <  2:640872/143‑1 (MQ=255)                                         tgCTGCGCTACTTGCAATATGCGCAATCATCGCACCCAGACTTGCACGAACTTCCGCCGGGTTTGGCCCACCAAGCATAATCCGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCAt                                                                                                 <  2:627969/142‑1 (MQ=255)                                         aGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCAt                                                                                                 <  1:560733/143‑1 (MQ=255)                                            tGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACATGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGACGGTCGGTGACGGGCCGCGTGCGGCGCGCGCATAGAGCCAGCCGCCATcca                                                                                              >  1:841225/1‑143 (MQ=255)                                            tGCGCCATCTGCAATATGCGCAATCATCGCATCCAGGCCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATaca                                                                                              <  2:706068/143‑1 (MQ=255)                                                                  atcatcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCtt                                                                        >  2:150483/1‑143 (MQ=255)                                                                  atcatcGCATCCAGACATGCACGCAATTCGGTCGGTAATGACTCTCCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATAAAACGAGCGGCCATGCACCACGTCCAACATCGCCTGcct                                                                        >  2:196249/1‑141 (MQ=255)                                                                   tgatcGCATCCAGACCTGCACGCAGTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTg                                                                       <  2:400759/141‑1 (MQ=255)                                                                      tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCGGTCGGTGACGGGCCGTGTGCAGCGCCCGCATGTAGCGAGAGGCCCGACACCACTGCAACCACCGCCCGCCTggag                                                                    >  2:456375/1‑141 (MQ=255)                                                                      tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTGGGTc                                                                    >  2:560466/1‑143 (MQ=255)                                                                      tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTCCGGCGCCCGCCTATAGCGCGGGGCCATACACCACTTCCACGAGCGCCTGGTTGGTc                                                                    >  1:329668/1‑143 (MQ=255)                                                                      tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTGGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTc                                                                    <  1:279788/143‑1 (MQ=255)                                                                         cATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGAAGGGCGGTTTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCt                                                                 <  1:127109/143‑1 (MQ=255)                                                                           tCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATCTAGCGAGCGGCCATCCCCTACTTCCACCATCGCCTGATTGGTCGCtta                                                               >  1:754676/1‑142 (MQ=255)                                                                              aGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTtcatc                                                            >  1:305870/1‑143 (MQ=255)                                                                                  cTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCcgcg                                                        >  1:504196/1‑143 (MQ=255)                                                                                  cTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCg                                                        <  1:5106/143‑1 (MQ=255)                                                                                   tGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCCGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCgg                                                       <  1:820171/143‑1 (MQ=255)                                                                                        gcacTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCGCCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATg                                                  >  1:863994/1‑143 (MQ=255)                                                                                        gcacTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCCATg                                                  >  1:211159/1‑143 (MQ=255)                                                                                          acTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGAGCCGTGTGCAGCGCCCGCATATAGAGAGCGGACATACACCACTGCCACCACCGCCTGCCTAGTCGCTTCCCCAGCGGccacgtg                                                >  2:452363/1‑137 (MQ=255)                                                                                            ttCAGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCACCAGCATATAGCGAGCGGCCATACACCACTCCCACCATAGCCTCCTTGCTCGCTCCATCAGCGGCAATCTAgg                                              >  2:390232/1‑143 (MQ=255)                                                                                               cgccgGTTTGTGCCCACCCAGCATAATCAGCACTTCACCGCCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGa                                           <  1:505630/143‑1 (MQ=255)                                                                                                       atGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGAGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCg                                   <  1:339728/142‑1 (MQ=255)                                                                                                         ggCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCACCGGa                                 >  2:526035/1‑143 (MQ=255)                                                                                                          gCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatgg                                                      <  1:604791‑M2/121‑88 (MQ=255)                                                                                                          gCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatgg                                                      >  2:604791‑M2/1‑34 (MQ=255)                                                                                                          gCCCACCAAGCATAATCAGAACGTCACCGGCAGTGGGTGAGGGGCCGTGTGCAGCGCCCGCATATAGCCAGCGGGCATACACCACCTCCACCATCGGCAGCTGGGGACCGAGATCCGCCGCGAGGTAGGTGACGTCATCGGAg                                >  2:828444/1‑143 (MQ=255)                                                                                                            ccaccaAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggcagtgcgtgcaggtctggatgcgatgattgcgcatcttgaacatggggccgctttcccgtgggctaatga                              <  2:313212‑M2/143‑112 (MQ=255)                                                                                                             caccaTGCATAATCAGCTCTTCACCGTCAGTCGGTGACGGGCCGTGTCCAGCGCCCGCATATAGCTAGCGTCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCg                             <  2:167903/143‑1 (MQ=255)                                                                                                              accaAGCATAATCAGCACTTCCCCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCgg                            <  2:700492/143‑1 (MQ=255)                                                                                                              accaAGCATAACCAGCACGCCACCGGCAGTCGGTGACGGGCCGTGCGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCgg                            <  1:292533/143‑1 (MQ=255)                                                                                                                caAGCATAATCAGCACTTCCCCGGCCGTCGGTGCCGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCa                          <  2:855596/143‑1 (MQ=255)                                                                                                                    cATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCGTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCACCGGCGTCGGCGGaaa                      >  2:627477/1‑143 (MQ=255)                                                                                                                     aTAATCAGTTTTTCACCGACAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTGCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAAt                     <  1:119298/143‑1 (MQ=255)                                                                                                                       aaTCAGCACTTCACCGGCGGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCa                   <  1:196249/143‑1 (MQ=255)                                                                                                                       aaTCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCa                   <  1:150483/143‑1 (MQ=255)                                                                                                                         tCAGCACTTCACCGGCAGTCGGTGAGGGGCCGTGTGCAGCACCCGCATATAGCGAGCGGCCATACACCACTTTCACCATCGCTTGCTTGGTCGCTTTATTAGTGTCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGa                 >  1:310750/1‑143 (MQ=255)                                                                                                                         tCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGa                 <  1:600166/143‑1 (MQ=255)                                                                                                                                   aCCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTGGGTCGCTGCATCAGCGGCAAGGTAGGTGACGTCATCGGAGGCGGCAGAAATGAGACAGAGGCTAc       >  2:706452/1‑143 (MQ=255)                                                                                                                                    ccGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATATCGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTAGTCGCTTAATCAGCGGCAATGTAGGTGACGTCATCGGAGTCAGCAGAAATCAGACCGCGGCTACg      >  1:55594/1‑143 (MQ=255)                                                                                                                                        cAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTGCATCGGCGGACATGACGGGGACGTCATCGGAGTCGGCAGAAATCAGACCGAGGCTACGAata  >  1:33908/1‑143 (MQ=255)                                                                                                                                           |                                                                                                                                            CCAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGACCGAGGCTACGAATA  >  NC_000913/2556025‑2556302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.