New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2556158 | 49 (1.070) | 3 (0.070) | 3/252 | NT | 5.9% | coding (243/660 nt) | eutL | putative structural protein, ethanolamine utilization microcompartment |
? | NC_000913 | = 2556163 | 49 (1.120) | coding (238/660 nt) | eutL | putative structural protein, ethanolamine utilization microcompartment |
CATGTGCCAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGACCGAGGCTACG > NC_000913/2556019‑2556298 | ccggagCCAGGAGTGCCGTATCTTTCGCGTCATTCGCCCACTGGAAAGCTTCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCa < 1:703169/138‑1 (MQ=255) ccAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATACTCAGCACTTCCCCGGCAGTcgct < 1:597053‑M2/143‑5 (MQ=255) ccACGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGACAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggt > 1:373263‑M2/1‑139 (MQ=255) cAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGCTTGGCCCACAAAGCACAATCAGCACACCACCGGCAGTcgctg < 2:345010‑M2/143‑6 (MQ=255) aTGCCGTACCTTGCGCGTCAGTAGCCCACTGGACAGCTGCGCCATTTTCAATATGCGCAATCAGCGCACCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACggg < 2:696729/143‑1 (MQ=255) tGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCGGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGc < 2:131885/143‑1 (MQ=255) cGTATCTCGCCCGTCATCAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCgt < 1:215450/143‑1 (MQ=255) gTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTGCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCgtg < 2:90633/143‑1 (MQ=255) tATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAACCATCGCATCCAGACCTGCACGCACGTCCGCCGGGTTTGGGCCACCAACCATAATCAGCACCTCACCGGCAGTCGGTGACGAGCCggac > 2:436619/1‑140 (MQ=255) cTTGCGCGTCATTAGCCCACGGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCa < 1:677348/143‑1 (MQ=255) gTCATCAGCCCACTGGAAAGCTGCGCCATTTTCAATAGGCGCAATCATCGCATCCAGACCCGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCg < 1:491256/143‑1 (MQ=255) tcctgaGCCCACTTGGAGGCTGCTCCATTTTCAATATGCGCAATCATCGCCTCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGc < 2:784624/138‑1 (MQ=255) tCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGAGGGGCCGTGTGCAGAGCCCgg > 1:187658/1‑142 (MQ=255) tCATTAGCCCACGGGAAAGCGGCCCCATGTTCAAGATGCGCAATCATCGCATCCAGACCTGCACGCACTGCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGactgccggtgaagtgctgattatgcttggtgg < 2:313212‑M1/143‑33 (MQ=255) aTTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCat > 1:541385/1‑143 (MQ=255) cccACTGGAAAGCTGCGCCACTTTCAATATGCGCAATCCTCGCATCCAGCCCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagc < 1:716543/143‑1 (MQ=255) cACTGGAACTCTTCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGTGTTTGGCCCACCAGGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagcga < 2:736830/143‑1 (MQ=255) aCTGGAAAGCTGCGCCATTTTCAATAAGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCACCCGCATCTagcgcg > 2:871529/1‑141 (MQ=255) tGGAAAGCTGCGCCATTTTCAATCTGCGCGATCTTTTCTCCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATagcgagcg < 2:640872/143‑1 (MQ=255) tgCTGCGCTACTTGCAATATGCGCAATCATCGCACCCAGACTTGCACGAACTTCCGCCGGGTTTGGCCCACCAAGCATAATCCGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCAt < 2:627969/142‑1 (MQ=255) aGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCAt < 1:560733/143‑1 (MQ=255) tGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACATGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGACGGTCGGTGACGGGCCGCGTGCGGCGCGCGCATAGAGCCAGCCGCCATcca > 1:841225/1‑143 (MQ=255) tGCGCCATCTGCAATATGCGCAATCATCGCATCCAGGCCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATaca < 2:706068/143‑1 (MQ=255) ccATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGactgccggtgaagtgctgattatgcttggtgggc < 1:604791‑M1/121‑35 (MQ=255) ccATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGactgccggtgaagtgctgattatgcttggtgggc > 2:604791‑M1/1‑87 (MQ=255) atcatcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCtt > 2:150483/1‑143 (MQ=255) atcatcGCATCCAGACATGCACGCAATTCGGTCGGTAATGACTCTCCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATAAAACGAGCGGCCATGCACCACGTCCAACATCGCCTGcct > 2:196249/1‑141 (MQ=255) tgatcGCATCCAGACCTGCACGCAGTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTg < 2:400759/141‑1 (MQ=255) tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCGGTCGGTGACGGGCCGTGTGCAGCGCCCGCATGTAGCGAGAGGCCCGACACCACTGCAACCACCGCCCGCCTggag > 2:456375/1‑141 (MQ=255) tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTGGGTc > 2:560466/1‑143 (MQ=255) tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTCCGGCGCCCGCCTATAGCGCGGGGCCATACACCACTTCCACGAGCGCCTGGTTGGTc > 1:329668/1‑143 (MQ=255) tcGCATCCAGACCTGCACGCACTTCCGCCGGGTTGGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTc < 1:279788/143‑1 (MQ=255) cATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGAAGGGCGGTTTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCt < 1:127109/143‑1 (MQ=255) tCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATCTAGCGAGCGGCCATCCCCTACTTCCACCATCGCCTGATTGGTCGCtta > 1:754676/1‑142 (MQ=255) aGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCCGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTtcatc > 1:305870/1‑143 (MQ=255) cTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCcgcg > 1:504196/1‑143 (MQ=255) cTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCg < 1:5106/143‑1 (MQ=255) tGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCCGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCgg < 1:820171/143‑1 (MQ=255) gcacTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCGCCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATg > 1:863994/1‑143 (MQ=255) gcacTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCCATg > 1:211159/1‑143 (MQ=255) acTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGAGCCGTGTGCAGCGCCCGCATATAGAGAGCGGACATACACCACTGCCACCACCGCCTGCCTAGTCGCTTCCCCAGCGGccacgtg > 2:452363/1‑137 (MQ=255) ttCAGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCACCAGCATATAGCGAGCGGCCATACACCACTCCCACCATAGCCTCCTTGCTCGCTCCATCAGCGGCAATCTAgg > 2:390232/1‑143 (MQ=255) cgccgGTTTGTGCCCACCCAGCATAATCAGCACTTCACCGCCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGa < 1:505630/143‑1 (MQ=255) atGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGAGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCg < 1:339728/142‑1 (MQ=255) ggCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCACCGGa > 2:526035/1‑143 (MQ=255) gCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatgg < 1:604791‑M2/121‑88 (MQ=255) gCCCACCAAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatgg > 2:604791‑M2/1‑34 (MQ=255) gCCCACCAAGCATAATCAGAACGTCACCGGCAGTGGGTGAGGGGCCGTGTGCAGCGCCCGCATATAGCCAGCGGGCATACACCACCTCCACCATCGGCAGCTGGGGACCGAGATCCGCCGCGAGGTAGGTGACGTCATCGGAg > 2:828444/1‑143 (MQ=255) ccaccaAGCATAATCAGCACTTCACCGGCAGTcggtgaagtgctgattatgcttggtgggccaaacccggcggcagtgcgtgcaggtctggatgcgatgattgcgcatcttgaacatggggccgctttcccgtgggctaatga < 2:313212‑M2/143‑112 (MQ=255) caccaTGCATAATCAGCTCTTCACCGTCAGTCGGTGACGGGCCGTGTCCAGCGCCCGCATATAGCTAGCGTCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCg < 2:167903/143‑1 (MQ=255) accaAGCATAATCAGCACTTCCCCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCgg < 2:700492/143‑1 (MQ=255) accaAGCATAACCAGCACGCCACCGGCAGTCGGTGACGGGCCGTGCGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCgg < 1:292533/143‑1 (MQ=255) caAGCATAATCAGCACTTCCCCGGCCGTCGGTGCCGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCa < 2:855596/143‑1 (MQ=255) cATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCGTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCACCGGCGTCGGCGGaaa > 2:627477/1‑143 (MQ=255) aTAATCAGTTTTTCACCGACAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTGCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAAt < 1:119298/143‑1 (MQ=255) aaTCAGCACTTCACCGGCGGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCa < 1:196249/143‑1 (MQ=255) aaTCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCa < 1:150483/143‑1 (MQ=255) tCAGCACTTCACCGGCAGTCGGTGAGGGGCCGTGTGCAGCACCCGCATATAGCGAGCGGCCATACACCACTTTCACCATCGCTTGCTTGGTCGCTTTATTAGTGTCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGa > 1:310750/1‑143 (MQ=255) tCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGa < 1:600166/143‑1 (MQ=255) cagcgactgccggtggtgtgctgattgtgctttgtgggccaagcccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatggcgcagctttccagtgggctaatgacgcgcaagatacggcattcctg < 2:345010‑M1/140‑139 (MQ=255) agcgactgccggggaagtgctgagtatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatggcgcagctttccagtgggctaatgacgcgcaagatacggcattcctgg < 1:597053‑M1/141‑140 (MQ=255) aCCGactgccggtgaagtgctgattatgcttggtgggccaaacccggcggaagtgcgtgcaggtctggatgcgatgattgcgcatattgaaaatggcgcagctgtccagtgggctaatgacgcgcaagatacggcattcgtgg > 1:373263‑M1/1‑4 (MQ=255) aCCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTGGGTCGCTGCATCAGCGGCAAGGTAGGTGACGTCATCGGAGGCGGCAGAAATGAGACAGAGGCTAc > 2:706452/1‑143 (MQ=255) ccGGCAGTCGGTGACGGGCCGTGTGCCGCGCCCGCATATCGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTAGTCGCTTAATCAGCGGCAATGTAGGTGACGTCATCGGAGTCAGCAGAAATCAGACCGCGGCTACg > 1:55594/1‑143 (MQ=255) | CATGTGCCAGGAATGCCGTATCTTGCGCGTCATTAGCCCACTGGAAAGCTGCGCCATTTTCAATATGCGCAATCATCGCATCCAGACCTGCACGCACTTCCGCCGGGTTTGGCCCACCAAGCATAATCAGCACTTCACCGGCAGTCGGTGACGGGCCGTGTGCAGCGCCCGCATATAGCGAGCGGCCATACACCACTTCCACCATCGCCTGCTTGGTCGCTTCATCAGCGGCAATGTAGGTGACGTCATCGGAGTCGGCAGAAATCAGACCGAGGCTACG > NC_000913/2556019‑2556298 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |