New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3726897	36 (0.790)	3 (0.070)	3/242	NT	8.1%	intergenic (+15/+27)	wecH/yiaA	O‑acetyltransferase WecH/conserved inner membrane protein YiaA
	?	NC_000913	= 3726905	35 (0.830)					intergenic (+23/+19)	wecH/yiaA	O‑acetyltransferase WecH/conserved inner membrane protein YiaA

TTGAGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT  >  NC_000913/3726764‑3727042                                                                                                                                              |                                                                                                                                          ttGAGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAATAAAAGCCCGGTCACATTGGACt                                                                                                                                          <  2:732574‑M2/143‑2 (MQ=255)      cTTAAACATTGGCCAATACTGGATATTAGTTGGATCTTTGGCGCGCCGTTGGCAGCGAGTTTGTTACTTTCCATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACtgaccg                                                                                                                                     >  2:418556‑M2/1‑137 (MQ=255)      cTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCGATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACtgaccg                                                                                                                                     >  2:71583‑M2/1‑137 (MQ=255)       ttAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACtgaccgg                                                                                                                                    <  1:661306‑M2/143‑8 (MQ=255)            aaTTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTa                                                                                                                               >  1:150367/1‑143 (MQ=255)               tGGCCAACACTGGATATTATTTGGATCGTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAGCGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGt                                                                                                                            <  1:54805/143‑1 (MQ=255)                        cTGGAGATTATTTGGCTTTGTTGCGCGTCGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAATATCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTc                                                                                                                   <  2:97736/143‑1 (MQ=255)                          ggATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGc                                                                                                                 >  1:496420/1‑143 (MQ=255)                                 attTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTAttc                                                                                                          >  1:716007/1‑143 (MQ=255)                                     ggATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTcc                                                                                                      >  1:499306/1‑143 (MQ=255)                                        tCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTgg                                                                                                   >  1:210857/1‑143 (MQ=255)                                        tCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTgg                                                                                                   >  1:734012/1‑143 (MQ=255)                                                 cgACGTTGGCAGCGAGTTTATTACTGTCTATGCTGGTACAACGAAGCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGAACTGACCGGGCTTACGTGAGTTATTCGCTCCATTCTTCGTGAGTGACgtgt                                                                                          >  2:238742/1‑143 (MQ=255)                                                  gACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCtgtg                                                                                         >  1:694552/1‑143 (MQ=255)                                                          cAGCGAGTTTGTTACTTGCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCtttt                                                                                 <  2:866262/143‑1 (MQ=255)                                                           aGCGGGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTCAGTAAAAGCCCGGTCTCATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTtg                                                                                <  2:448938/143‑1 (MQ=255)                                                           aGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATGCGCTGTACTCTTCCTGGGTAACCTGTGTTTCTTTtg                                                                                >  2:630760/1‑143 (MQ=255)                                                             cGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTtggt                                                                              <  2:661306/143‑1 (MQ=255)                                                               aGTGTGTTAGTTTCTGTGCTGGGACAACGACTCGACAGAAACAGATTAGTGGGTTAAGTAAACGCCCTGTCCCATAGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTtggtgg                                                                            <  2:455288/143‑1 (MQ=255)                                                                 tttGTTACTGTCTATGCTGGTACCACGAATCGACAGAAACAGATGAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGt                                                                          <  2:97437/143‑1 (MQ=255)                                                                       aCTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTc                                                                    >  1:732849/1‑143 (MQ=255)                                                                         tttCTATGCTGGTACAACGAATCGACAGAACCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCg                                                                  <  2:712488/143‑1 (MQ=255)                                                                                  tGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGa                                                         >  2:656702/1‑143 (MQ=255)                                                                                  tGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATGCCGGCATCACGa                                                         >  2:167299/1‑143 (MQ=255)                                                                                         aCGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCGTTTGGTGGGTTTATTCGGGCATCCAGAATAtatt                                                  >  2:708436/1‑143 (MQ=255)                                                                                            aaTCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt                                               <  1:438865/143‑1 (MQ=255)                                                                                                 aCAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGAGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTACTGcccg                                          >  2:309373/1‑140 (MQ=255)                                                                                                      aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                     >  2:894934/1‑143 (MQ=255)                                                                                                       aCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACt                                    >  1:403977/1‑143 (MQ=255)                                                                                                       aCAGATTAGGGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACt                                    <  1:775015/143‑1 (MQ=255)                                                                                                         aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACtgaccgggcttttacttaactcactaatctgtttctgtcgattcgttgtaccagcatagaaagtaacaaactcgctgccaacgtcgcgcaacagatccaaataat                                  <  1:304317‑M2/143‑106 (MQ=255)                                                                                                           aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACtgaccgggcttttacttaactcactaatctgtttctgtcgattcgttgtaccagcatagaaagtaacaaactcactgccaacgtcgcgcaaaagatccaaataatat                                <  1:731885‑M2/143‑108 (MQ=255)                                                                                                             tAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGATACTGGActa                              >  1:682939/1‑141 (MQ=255)                                                                                                               gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                            <  1:94557/143‑1 (MQ=255)                                                                                                                tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc                           >  1:304486/1‑143 (MQ=255)                                                                                                                gtggTTAAGGAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTAGTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGCGGGTTTATTCCGGCATCATGAATATTTTTCTGCACCGCTACTGCACCAAAc                           <  2:477298/140‑1 (MQ=255)                                                                                                                        gTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaa                   >  2:233798/1‑143 (MQ=255)                                                                                                                        gTAAAAGCACGGTCGCATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaa                   <  1:386196/143‑1 (MQ=255)                                                                                                                         tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag                  <  2:732849/143‑1 (MQ=255)                                                                                                                            aaGCCCGGTCACATTGGACtgaccgggcttttacttaactcactaatctgtttctgtcgattcgttgtaccagcatagaaagtaacaaactcgctgcaaacgtcgcgcacaggatccaaataatatccagtattggccaattt               <  1:335438‑M2/143‑125 (MQ=255)                                                                                                                               cccGGTCACATTTGACTGCTCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTTGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa            <  2:694552/143‑1 (MQ=255)                                                                                                                               cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTGTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAACCACGCTTAAGAAGaaa            >  2:747145/1‑143 (MQ=255)                                                                                                                                  ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCATTTGGTGGGTTTATTCCGGCAACACGAATATTGTTCTGCAACGCTACTGCACCAAACAGGCTTAAGaagcaagcg         >  2:284709/1‑142 (MQ=255)                                                                                                                                        agtGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa   <  1:87239/141‑1 (MQ=255)                                                                                                                                         ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAt  >  2:70739/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                          TTGAGCTTAAAAATTGGCCAATACTGGATATTATTTGGATCTTTTGCGCGACGTTGGCAGCGAGTTTGTTACTTTCTATGCTGGTACAACGAATCGACAGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCAT  >  NC_000913/3726764‑3727042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.