New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 103078	46 (1.150)	4 (0.100)	4/254	NT	8.8%	coding (846/921 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B
	?	NC_000913	= 103096	39 (1.020)					coding (864/921 nt)	ddlB	D‑alanine‑‑D‑alanine ligase B

TTGCAGGCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTCGCCGCAATAATGGA  >  NC_000913/102941‑103220                                                                                                                                          |                                                                                                                                               ttGCAGGCCTTACTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTCTCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGcc                                                                                                                                           <  1:714333/143‑1 (MQ=255) ttGCAGGCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGcc                                                                                                                                           <  1:320526/143‑1 (MQ=255)  tGCAGGCATTAGTGCGGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCg                                                                                                                                          <  2:536369/143‑1 (MQ=255)      gggaTTAGTGCTGAAGGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATgg                                                                                                                                      <  2:138767/140‑1 (MQ=255)      gacATTAGTGCTGTAAGTATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATgg                                                                                                                                      <  1:761940/141‑1 (MQ=255)       gCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATggc                                                                                                                                     >  1:60024/1‑143 (MQ=255)       gCATGAGTGCTCCAAGCATGGACCACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGGTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATggc                                                                                                                                     <  1:660044/143‑1 (MQ=255)         aTTAGTGTGGAAAGGATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATggcgg                                                                                                                                   <  2:36435/143‑1 (MQ=255)         aTTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGATGGACAGCGATGGACAGTTGTATCTGCTGGAAGCCAATACATCACCGGGTATGACCGGCCACCGCCTGGTGCCGATggcgg                                                                                                                                   >  2:368383/1‑143 (MQ=255)               gCTGAAAGCATGGACGACGTTAGGTTGCAAATGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTc                                                                                                                             >  2:577351‑M2/1‑142 (MQ=255)                cgtaaagcaTGCACGACGTTAGGTTGCAAAGGATAGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTca                                                                                                                            >  1:465792‑M2/4‑141 (MQ=255)                  gtaagcATGGACGACGTTAGGTTGCAAAGGATGTGGACGTATTGACGTTATGCTGGACAGCGATGGACATTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGacgtgccgctatcggcaccagg                                                                                                                          <  1:36466‑M1/141‑23 (MQ=255)                  gcaagcATGGACGACGTCAGGTTGCAAAGGATGGGGACGTATAGAAGTTATGGTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTcagg                                                                                                                          >  2:14417‑M2/3‑139 (MQ=255)                   aaaGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGCCACGTcagcc                                                                                                                         <  2:391386‑M2/143‑6 (MQ=255)                    aaGCATGGGCGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTcaggca                                                                                                                        <  1:724637/143‑1 (MQ=255)                      gCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGCTGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTcaggcagg                                                                                                                      >  2:277710/1‑143 (MQ=255)                        atcgacggcGGTAGGTTGCGAAGGATGGGGACGTATTGACGTTAGGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTa                                                                                                                    <  1:529804/140‑1 (MQ=255)                        aTGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTGTGGGCCGCCACAGCCTGGTGCCGCTGGCGGCACGTCAGGCAGGTa                                                                                                                    >  2:162869/1‑143 (MQ=255)                            acgacgTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCATAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAg                                                                                                                >  2:186348/1‑143 (MQ=255)                            acgacgTTAGGTTGCAAAGGATGGGGACGGATTGACGTTATGCTGGCCAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAg                                                                                                                <  1:408483/143‑1 (MQ=255)                                cggtaggGTGCAACGGATGGGGAGGGATGGACGTTATGCGGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGgtgccgccatcggcaccaggctgtggctggtcatac                                                                                                            <  1:390758‑M1/140‑37 (MQ=255)                                 gTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGCATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTtct                                                                                                           >  1:536649/1‑143 (MQ=255)                                   tAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGCGCTTCTCg                                                                                                         >  2:91820/1‑143 (MQ=255)                                       ttGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATAACCAGCCAAAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGCGCTTCTCGCAGt                                                                                                     >  1:68813/1‑143 (MQ=255)                                         gCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTg                                                                                                   <  2:520706/143‑1 (MQ=255)                                          cAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGCTGGCGGCACGTCAGGCAGGTATGAGCTGCTCGCAGTTgg                                                                                                  >  2:605524/1‑143 (MQ=255)                                           aaaGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTTGGGCCGATGGCGGCACGTCAGGCAGGTGGGAGCTTCTCGCAGTTgct                                                                                                 >  1:88176/1‑141 (MQ=255)                                                aTGGTGACGTATTGACGTTATGCTAGACAGCGATTGACAGTTTTATCTGCTAGGGGCCAATACCTCACCGGTTATGACCAGCCACAGCCTGGTGCCGATGTCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTAc                                                                                            <  2:513961/143‑1 (MQ=255)                                                       ggTATTGACGTTATGCTGGACAGCGACGGACAGTTTTATCTGCTGGAAGCCAAGACCTCACCGGGTATGACCAGCCACAGGCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCt                                                                                     <  2:519448/142‑1 (MQ=255)                                                       cGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCt                                                                                     <  1:385406/143‑1 (MQ=255)                                                         tATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTCTGAGCTTCTCGCAGTTGGTAGTACGAATTCCgg                                                                                   >  2:629060/1‑143 (MQ=255)                                                           ttaaCGTTATGCTGAACAGCGATGGACAGATTTATCTGCTTGAACCCAAGACGTCACCGGTAATGACCAGCCAGAGCCTGGTGCGACTGGCGGCACGTCGCGCAGGTATGAGCTTCTCGCAGTTGGGAGTACGTATTCTGGaa                                                                                 >  2:752192/4‑143 (MQ=255)                                                           ttGACGTTATGCTGGACAGCGATGGGCAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACCGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGGACGAATGCGGGaa                                                                                 >  2:539555/1‑143 (MQ=255)                                                            tGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAAc                                                                                >  2:78560/1‑143 (MQ=255)                                                                ggtATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATTAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGc                                                                            <  1:51663/141‑1 (MQ=255)                                                                 gtATGCTGGACAGCGGTGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCg                                                                           <  2:215841/142‑1 (MQ=255)                                                                              cGATGGGCAGTCTTATCTGCGGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCg                                                              <  2:141455/143‑1 (MQ=255)                                                                              cGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGacgtgccgccatcggcaccaggctgtggctggtcattcccggtgaggtattg                                                                                            <  1:561278‑M1/113‑53 (MQ=255)                                                                              cGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGacgtgccgccatcggcaccaggctgtggctggtcatacccggtgaggtattg                                                                                            >  2:561278‑M1/1‑61 (MQ=255)                                                                               gATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGc                                                             >  1:669874/1‑143 (MQ=255)                                                                                     cAGTTGTGTCTGCGGGAAGCCAGTACCTCACCGGGGAGGACCAGCCACAGCCTGGTGCCGATGGCGGCATGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGgctg                                                       <  2:268468/143‑1 (MQ=255)                                                                                      aGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGACACATTCGCGAGGCATGAGCTCACTGCGGCTTTTGTTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGgctgc                                                      >  2:766544/1‑143 (MQ=255)                                                                                            aTCTGCTGGGAGCCCATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGaa                                                <  1:104567/143‑1 (MQ=255)                                                                                            aTCCGCTGGAAGCCAACACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATTGCGGCACGTCAGGCAGGTATGAGCTTCGCGCAGCTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGaa                                                <  1:308132/143‑1 (MQ=255)                                                                                               tgccgGACGCCAATTCCTCATCGGGGATGCCCGGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAacac                                             <  2:620801/143‑1 (MQ=255)                                                                                                gctgGAAGCCAATACCTCACCGGGTATGACCATCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAAAATGTCGCAGGCTGCGCTGAACAcg                                            >  2:412596/1‑143 (MQ=255)                                                                                                    gAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCATCTCGCAGTTGGTAGTACGAATCCTGGAACTGGCGGACTAATATGTCGCAGGGAGCACTGAACACGCGaa                                        >  2:292733/1‑143 (MQ=255)                                                                                                         cAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTcaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcg                                                                 >  2:561278‑M2/1‑52 (MQ=255)                                                                                                         cAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGc                                   >  1:488290/1‑143 (MQ=255)                                                                                                         cAATACCTCACCGGGAATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTcaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcg                                                                 <  1:561278‑M2/113‑62 (MQ=255)                                                                                                               cTCGCCGGGTATGATCAGCCAGAGCCTGGTGCCGATGGCGGGACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCgaagaa                             <  2:420329/143‑1 (MQ=255)                                                                                                               cTCACCGGGTATGACCAGCCACGGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCgaagaa                             >  1:477307/1‑143 (MQ=255)                                                                                                                 cACGGGGTATGACCCGCCACTGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTGCGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAagaaga                           <  2:534943/143‑1 (MQ=255)                                                                                                                 cACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTGTCGCAGTGGGTAGTACGAATTCTGGAACTGGCGGACTGACACGTCGCAGGCTGCTCTGAACACGCGAAACGGCGAagaaga                           >  1:111090/1‑143 (MQ=255)                                                                                                                 cACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAagaaga                           <  1:719830/143‑1 (MQ=255)                                                                                                                       gTATGACCAGCCACAGCCTGGTGCCGATGGCGGCAC‑aggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcgctgtcccgcataacgtccatccctccccatccgttgcaccctaccg                     <  1:390758‑M2/143‑107 (MQ=255)                                                                                                                             ccAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTcg               <  1:78560/143‑1 (MQ=255)                                                                                                                                gccgcggCCTGGTGCCGGGGGCGGCACGTAGGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGGCGCAGGCTGCTCTGAACACGCGAGACAGCGAAGAAGAGGTTTCTTCTcgccg            <  2:1800/137‑1 (MQ=255)                                                                                                                                gCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGGATGAGCTTCGCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTcgccg            <  1:91820/143‑1 (MQ=255)                                                                                                                                   acaGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTCGCCGCaa         >  2:365951/1‑143 (MQ=255)                                                                                                                                      ggctgacgtggcgccatcggcaccaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcgctgtccagcataacgtcaatacgtccccatcctttgcaacctaacgtcgtccatgcttt      <  2:391386‑M1/141‑139 (MQ=255)                                                                                                                                       ccTGacgtgccgccatcggcaccaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcgctgtccaccataacttctatacgtccccatcctttgcaacctgacgtcgtccatgcttgc     >  2:14417‑M1/1‑4 (MQ=255)                                                                                                                                       ccTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTGCGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTGTTCTCGCCGCaataat     >  1:236301/1‑143 (MQ=255)                                                                                                                                       ccTGGTGCCGATAGCGGCACGTcaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaaatgtccatcgctgtccagcataacgtcaatacgtccacatcctttgcaacctaacgtcgtccatgcttac     <  1:36466‑M2/143‑122 (MQ=255)                                                                                                                                         tGacgtgccgccatcggcaccaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcgctgtccagcataacgtcaatacgtccctatcctttgcaacctaacgtcgtgcatgctttacg   >  1:465792‑M1/1‑2 (MQ=255)                                                                                                                                          gacgtgccgccatcggcaccaggctgtggctggtcatacccggtgaggtattggcttccagcagataaaactgtccatcgctgtccagcataacgtcaatacgtccccatcatttgcaacctaacgtcgtccatgctttcagc  >  2:577351‑M1/1‑1 (MQ=255)                                                                                                                                          |                                                                                                                                               TTGCAGGCATTAGTGCTGAAAGCATGGACGACGTTAGGTTGCAAAGGATGGGGACGTATTGACGTTATGCTGGACAGCGATGGACAGTTTTATCTGCTGGAAGCCAATACCTCACCGGGTATGACCAGCCACAGCCTGGTGCCGATGGCGGCACGTCAGGCAGGTATGAGCTTCTCGCAGTTGGTAGTACGAATTCTGGAACTGGCGGACTAATATGTCGCAGGCTGCTCTGAACACGCGAAACAGCGAAGAAGAGGTTTCTTCTCGCCGCAATAATGGA  >  NC_000913/102941‑103220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.