New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1411899 =88 (1.450)62 (1.250) 47/230 0.0 49.6% coding (50/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA
?NC_000913 = 1434958 54 (1.090)pseudogene (51/51 nt) ttcC putative tRNA 2‑thiocytidine (s(2)C32) synthase

TACGGTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1412065‑1411899
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaaagaacaatacaacctgaacaaGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGCC  <  NC_000913/1434958‑1434818
                                                                                                                                                                                                                                                                                                                    
TACGGTATGTGGATTGATGACATGAACGACGAATAGATCGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAA                                                                                                                                                                       <  1:301535/143‑1
    GTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAA                                                                                                                                                                   <  1:397940/143‑1
    GTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAA                                                                                                                                                                   <  1:545500/143‑1
    GTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCACCAATTTGCCCCATTTAGTACAAGAGAACTGAAATAATGCAAGAACATCAACAAATTACAAAGAAA                                                                                                                                                                   >  2:463460/1‑143
     TATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAcgaag                                                                                                                                                                  >  2:57623/1‑138
        ggGGAGTGATGACATGAAGGACGAACAGATAGCCAGGTTGAATGCGCGGTTATCGTAGTTGCAAAGTGTGCCCACACTTGGCACCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAAC                                                                                                                                                               <  2:845613/141‑1
        GTGGATTGATGACGTGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGAAAAGTTTTACCCCAATTTGCACCAATTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAAC                                                                                                                                                               <  2:1031151/143‑1
            ATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCGGAGATCTGCATTCTTGCAAGATACTCAACAAATTACAAAGAAAGAACAATA                                                                                                                                                           >  1:48162/1‑143
             TTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGACAGAACAATAC                                                                                                                                                          >  1:732283/1‑143
                ATGACATGAACGACGAACAGATAGCCCTGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAAC                                                                                                                                                       >  1:879937/1‑143
                ATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCCAGAAAATCAACCAATCACAAAGCAAGAACAATACAAC                                                                                                                                                       >  2:300931/1‑143
                ATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAAC                                                                                                                                                       >  1:693472/1‑143
                ATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAAC                                                                                                                                                       <  2:328224/143‑1
                  GACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCT                                                                                                                                                     <  1:190860/143‑1
                    ccTGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCACATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACCATACAACCTGA                                                                                                                                                   <  2:625919/141‑1
                    CATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAGTAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGA                                                                                                                                                   <  1:716417/143‑1
                    CATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGA                                                                                                                                                   >  2:650988/1‑143
                            ACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGAACCAGAGAACTGAAATAATGCAAGAAAATTAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAA                                                                                                                                           <  2:977560/143‑1
                              GAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGG                                                                                                                                         >  1:522710/1‑143
                               AACAGATAGACATGTTGAATGCGTGGTTATCGTAGTTGAAAAGTTTGACCACAATTTGACCCATCTAGTAACAGAGAACTGAAATAATGCAAGAAAATCAACAAATGACAAAGAAAGAACAATACAACCTGAACAAGTAAGGG                                                                                                                                        <  2:80517/143‑1
                                    ATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATGACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAA                                                                                                                                   >  1:761007/1‑143
                                      gGCCAGGTTGAAGGCGTGGTTATGGTAGTTGCAAAGTGTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAAT                                                                                                                                 <  2:776110/142‑1
                                        tCATTTTGAATTCGCAGTTATTCTAGTTGCAAAGTTTGCCCCCAATTTGCCACATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCA                                                                                                                               <  2:367368/142‑1
                                        CCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCA                                                                                                                               >  1:681807/1‑143
                                        CCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGGACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACCATACAACCTGAACAAGTAAGGGCAAAAATCA                                                                                                                               <  1:423162/143‑1
                                         CATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATACTGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACATGAACAAGTAAGGGCAAAAAACAa                                                                                                                              >  2:939869/1‑142
                                             taGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGATAGAACAATACAACCTGAACAAGTAAGGGCACACATCACAACa                                                                                                                          >  2:492258/3‑142
                                             TTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATCATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCCAAAATCACAACT                                                                                                                          >  1:492314/1‑143
                                             TTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGAAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAACGGCAAAAATCACAACT                                                                                                                          >  1:163863/1‑143
                                                AATGCGCGGTTATCGTAGTTGCAAAGTGTGCCCCCAGTTTGCACCATTTAGTACCAGAGAACTGAGAGAAGGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCGCAACAAGTAAGGGCAAAAATCACACCTCTC                                                                                                                       <  2:451529/143‑1
                                                   GCGCGGTTAGCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAAGCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGA                                                                                                                    <  2:444701/143‑1
                                                    CGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGAC                                                                                                                   <  1:173263/143‑1
                                                     GCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAAAAAAGGGGTTAATTAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACT                                                                                                                  >  1:815625/1‑143
                                                        GTTATCGTAGTTGCAACGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAAGACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCAT                                                                                                               <  1:63833/143‑1
                                                              GTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACCAAGAAAGAACAATACAACCTGAACAAGTAAGAGCAAAAATAACACCTCTCTGACTCATAAGTAT                                                                                                         >  2:903163/1‑143
                                                                   TGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTAC                                                                                                    >  1:466950/1‑143
                                                                    GCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAGGAAAGAACAATACAAACTGAACAAGTAAGGGCAAAAATCACAAGTATCTGACTCACAAGTAACTTACT                                                                                                   >  2:935790/1‑143
                                                                      AAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAACAATCACAACTCTCTGACTCATAAGTATTTTACTTg                                                                                                 >  1:23556/1‑142
                                                                       AAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTA                                                                                                                                            >  2:461975/1‑99
                                                                       AAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTA                                                                                                                                            <  1:461975/99‑1
                                                                         GTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGTGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTT                                                                                              <  2:1040856/143‑1
                                                                           TTGCCACCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCTACAAATTACAAAGACACACTACTACTTCCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTT                                                                                            <  2:16221/143‑1
                                                                                CCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTCTTTTTCAATG                                                                                       >  1:270560/1‑143
                                                                                CCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATG                                                                                       >  1:938933/1‑143
                                                                                CCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGAC                                                                                                                   <  2:1036747/115‑1
                                                                                CCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGAC                                                                                                                   >  1:1036747/1‑115
                                                                                CCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAACACAACCTGAACAAGTAACGGCAAACAGCACAACTCTCTGACTCATGAGGCTTGTACATCTTTTTCAATG                                                                                       >  1:414800/1‑143
                                                                                     TTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAGGAACAATACAGCCTGAACAAGTAAGGGCAAAGATCACAACTCTCTGACTCGTAAGTATATTACTGATGTGTCAATGTGTTA                                                                                  >  1:130201/1‑143
                                                                                     TTTGCACCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTA                                                                                  <  1:335643/143‑1
                                                                                        GCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAAT                                                                               <  2:634248/143‑1
                                                                                         CCCCATGTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATA                                                                              <  2:507389/143‑1
                                                                                           CCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAACAATCACAACTCTCTGACGCATAAGTACTATACTTATTTTTCACTGTGTTCAACATC                                                                            >  2:991353/1‑143
                                                                                           CCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATC                                                                            >  1:96559/1‑143
                                                                                            CATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCA                                                                           >  1:88749/1‑143
                                                                                            CATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCA                                                                           >  2:750425/1‑143
                                                                                            CATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATCACAAAGAAAGAACAATACAGCCTGAACAAGTAAGGGCAAAAATCACACCTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCA                                                                           <  1:998239/143‑1
                                                                                                 AGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGC                                                                      <  2:789458/143‑1
                                                                                                   TACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGAATCATAAGTATTCTACTAATTTTACAACGTACTAATTATCATCAGCGA                                                                    >  2:420510/1‑143
                                                                                                     CCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACA                                                                  >  2:259855/1‑143
                                                                                                         AGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAA                                                              >  2:195573/1‑143
                                                                                                              TGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGC                                                         >  1:56385/1‑143
                                                                                                              TGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGC                                                         >  1:710707/1‑143
                                                                                                              TGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAAAATTAAACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGC                                                         <  1:212800/143‑1
                                                                                                                AAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTA                                                       >  1:807125/1‑143
                                                                                                                     ATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGCTA                                                  >  2:874365/1‑143
                                                                                                                     ATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGATAAATATCATCAGCGACAACAATAAGCTACGATA                                                  >  2:866579/1‑143
                                                                                                                      TGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAA                                                 <  1:829242/143‑1
                                                                                                                        CAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTCCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATC                                               >  1:813167/1‑143
                                                                                                                        CAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGACAAACATCACAACTCTCTGACTCATAAGTATTTTACCTATCTTTCAATGCGTTAAATATCATCAACGACAACAATAAGCTCCGATAATC                                               >  2:624419/1‑143
                                                                                                                         AAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCC                                              >  2:753241/1‑143
                                                                                                                            AAAATCAACAAATTACAAAGACAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTGTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACT                                           <  2:414765/143‑1
                                                                                                                               ATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTT                                        <  1:546166/143‑1
                                                                                                                                   ACACATTAGAAAGAACGAACAATACAACCTGAACAAGGAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTT                                    <  2:761007/143‑1
                                                                                                                                     AAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTG                                  <  1:650988/143‑1
                                                                                                                                     AAATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTG                                  >  1:1205/1‑143
                                                                                                                                      AATTACAAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGC                                 <  1:611974/143‑1
                                                                                                                                            AAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTT                           >  1:769874/1‑143
                                                                                                                                            AAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTT                           >  2:518520/1‑143
                                                                                                                                            AAAGAAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTT                           >  2:660402/1‑143
                                                                                                                                             AAGAACGAACAATACACCCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTT                          <  2:345746/143‑1
                                                                                                                                                AAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAACTCTCCTCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTG                       >  1:813988/1‑143
                                                                                                                                                AAAGAACAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTG                       >  1:506072/1‑143
                                                                                                                                                     agaacACAACCTGAACAAGTAAGGGCAAAAATCACAACTCGCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCT                  <  1:1043594/138‑1
                                                                                                                                                     ACAATACCACCTGAGCAAGTAAGGGCAAAAATCACATCTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCT                  <  2:424557/143‑1
                                                                                                                                                      CAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTT                 >  1:303892/1‑143
                                                                                                                                                      CAATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTT                 <  2:522710/143‑1
                                                                                                                                                       AATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTT                >  1:96572/1‑143
                                                                                                                                                       AATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCACTTT                >  2:919923/1‑143
                                                                                                                                                       AATACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAAGAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTT                >  1:97816/1‑143
                                                                                                                                                          ACAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGC             >  1:540606/1‑143
                                                                                                                                                           CAACCTGAACAAGTACGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCA            <  1:647733/143‑1
                                                                                                                                                           CAACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATATTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCA            <  1:935790/143‑1
                                                                                                                                                            AACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAG           >  1:896134/1‑143
                                                                                                                                                             ACCTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGC          >  1:841845/1‑143
                                                                                                                                                               CTGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGT        >  1:436350/1‑143
                                                                                                                                                                TGAACAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTT       <  1:259855/143‑1
                                                                                                                                                                 GAAGAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACACTAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTT      <  2:1031288/143‑1
                                                                                                                                                                    CAAGTAATGGCAAAAATCACAGCTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGC   <  2:807753/143‑1
                                                                                                                                                                    CAAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTATTGCCCCTTTTGCAGCGTGTTGC   >  1:184973/1‑143
                                                                                                                                                                     AAGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGCC  >  1:120170/1‑143
                                                                                                                                                                                                                                                                                                                    
TACGGTATGTGGATTGATGACATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1412065‑1411899
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagaaagaacaatacaacctgaacaaGTAAGGGCAAAAATCACAACTCTCTGACTCATAAGTATTTTACTTATTTTTCAATGTGTTAAATATCATCAGCGACAACAATAAGCTACGATAATCCACTCTTTTTTTGCCCCTTTTTTGCCCCTTTTGCAGCGTTTTGCC  <  NC_000913/1434958‑1434818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.