New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3868326	45 (1.360)	4 (0.130)	4/250	NT	8.5%	coding (984/1248 nt)	yidR	DUF3748 domain‑containing galacturonate catabolism protein YidR
	?	NC_000913	= 3868333	44 (1.400)					coding (977/1248 nt)	yidR	DUF3748 domain‑containing galacturonate catabolism protein YidR

ATACTCAACCTCGCCGCTTTGCGCATGGGCACAAGCAATTCGATTATCCAGCACAAAGCCCAACCATTCTCCTGACGGATGCCAGTTAAATGCAGACTGAATATCCGTTTTGTTATGGGTTAACTGGCGCGGCTCGCCGCCCTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3868179‑3868326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtggcTTATCTCGCCACA  <  NC_000913/3868333‑3868321                                                                                                                                                                   ATACTCAACCTCGCCGCTTTGCGCATGGGCACAATCAATTCGATTATCCAGCACAAAGCCCAACCATGCTCCTGACGGATGCCAGTTAAATGCAGACTGAATATCCGTTTTGTTATGGGTTAACTGGCGCGGCTCGCCGCCCT                    >  2:500060/1‑143     TCAACCTCGCCGCTTTGCGCATGGGCACAAGCAATTAGATTATCCAGCACAAAGCCCAACAATTCTCCTGACGAATGCCAGTTAAATGCAGACTGAATATACGTTTTGTTATGGGTTAACTGGCGCGGATAGACGCCCTGTGG                >  2:35905/1‑143                                                    CACAAAGCCCAACCATTCTCCTGACGGATGCCAGTTAAATGCAGACTGAATATCCGTTTTGTTATGGGTTAACTGGCGCGGCTCGCCGCCCTGTGGCTTATCTCGCCAC   >  1:299684/1‑109                                                    CACAAAGCCCAACCATTCTCCTGACGGATGCCAGTTAAATGCAGACTGAATATCCGTTTTGTTATGGGTTAACTGGCGCGGCTCGCCGCCCTGTGGCTTATCTCGCCAC   <  2:299684/109‑1                                                                                                                               GCGCGGCTCGCCGCCCTGTGGCTTATCTCGCCACA  <  1:492791/35‑1                                                                                                                               GCGCGGCTCGCCGCCCTGTGGCTTATCTCGCCACA  >  2:492791/1‑35                                                                                                                                                                   ATACTCAACCTCGCCGCTTTGCGCATGGGCACAAGCAATTCGATTATCCAGCACAAAGCCCAACCATTCTCCTGACGGATGCCAGTTAAATGCAGACTGAATATCCGTTTTGTTATGGGTTAACTGGCGCGGCTCGCCGCCCTGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3868179‑3868326 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtggcTTATCTCGCCACA  <  NC_000913/3868333‑3868321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.