New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1437105 =	84 (2.530)	9 (0.270)	8/262	NT	15.3%	intergenic (‑212/‑16)	ompN/micC	outer membrane porin N/small regulatory RNA MicC
	?	NC_000913	= 1455347	16 (0.490)					coding (184/747 nt)	paaC	phenylacetyl‑CoA 1,2‑epoxidase, structural subunit

AAGTTCAGTTAGCCGATAAATATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATC  >  NC_000913/1436964‑1437245                                                                                                                                               |                                                                                                                                             tgcctgctgctctcccagcgtctgggtgcatggtgcggtcacgccccggaactggaaagcgatctcgcactggcaaacattggcctcgatttattaggtcaggcacgcaacttcttatcgtatgccgctgaattagcgggaga                                                                                                                                              >  2:401959‑M1/143‑143 (MQ=255) aaGTTCAGTTAGCCGATAAATATCATGTGTTACGCCTTAAGTAAAACCTGAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATAc                                                                                                                                             <  1:488669/143‑1 (MQ=255)    ttCAGTTAGCCGATAAATATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGACAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGtt                                                                                                                                          >  2:623995/1‑143 (MQ=255)     tCAGTTAGCCGATAAATATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTa                                                                                                                                         <  1:254317/143‑1 (MQ=255)     tCAGTGAGCCGATAAATATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTa                                                                                                                                         <  1:555243/143‑1 (MQ=255)               gatagataTCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCgg                                                                                                                               <  1:495967/143‑1 (MQ=255)                 tAAATATCATTTGTTACGCCTTAAGTAAACCCTTAATCAAATAATTCCTCTGAAAAGATAATAAGCCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGt                                                                                                                             <  1:12202/143‑1 (MQ=255)                  aaaTATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGtt                                                                                                                            <  2:547559/143‑1 (MQ=255)                     gttgggtgaatggtgcggtcacgcaccggaactggaaatcgatctcgcactggcaaacattggcctcgatttattaggtcaggcacgcaacttcttatcgtatgccgctgaattagcgggagACGTTATTCTGCGCGGGTtat                                                                                                                          <  1:235400‑M1/21‑1 (MQ=255)                       tCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATg                                                                                                                       >  2:353016/1‑143 (MQ=255)                       tCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATg                                                                                                                       >  2:437907/1‑143 (MQ=255)                       tCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGGTATATg                                                                                                                       >  2:77212/1‑143 (MQ=255)                        cATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGc                                                                                                                      <  2:59465/143‑1 (MQ=255)                        cATTTGTTACGCCCTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGc                                                                                                                      <  1:208611/143‑1 (MQ=255)                        cATTTGGTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGc                                                                                                                      <  1:342165/143‑1 (MQ=255)                          tttGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATCCATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGACt                                                                                                                    >  1:160294/1‑143 (MQ=255)                                aCGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTg                                                                                                              <  1:293926/143‑1 (MQ=255)                                  tgcggtcacgcaccggaactggaaatcgatctcgcactggcaaacattggcctcgatttattaggtcaggcacgcaacttcttatcgtatgccgctgaattagcgggagACGCTATTCTGCGCGGGTTATATGCCTTTATTGt                                                                                                             <  1:264196‑M1/34‑1 (MQ=255)                                   ccTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTca                                                                                                           >  1:597233/1‑143 (MQ=255)                                          tAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGattt                                                                                                    <  1:608788/143‑1 (MQ=255)                                            caccggaactggatagcgagcccgccgtggcaaactttggcctctatttattaggtcaggcacgcaacttcttatcggatgccgctgaattagcgggagACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGatttt                                                                                                   >  2:108818‑M1/100‑143 (MQ=255)                                              aCCCTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGattttatt                                                                                                <  1:19652/143‑1 (MQ=255)                                                cTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGgttgtatttt                                                                                              >  2:11898/1‑143 (MQ=255)                                                cTTAATCAAATAATTCCTCTGAAATGATAAT‑AGTGTACTCATAATTAACGAAGATAATACATACAAAATATAATTTATATTATTAATTTGCGGCACGGTATACTGCTCGTAACATAGGCCTTTATTGTAACAGattttatttt                                                                                              >  2:232860/1‑143 (MQ=255)                                                     tCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTATCAGATATTTTATTTTCTGtt                                                                                         >  2:153182/1‑143 (MQ=255)                                                        aataatTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTggg                                                                                      >  2:655302/1‑143 (MQ=255)                                                              tCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCcattg                                                                                >  2:556225/1‑143 (MQ=255)                                                               ccTCTGAAAGGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCcattgc                                                                               <  1:133991/143‑1 (MQ=255)                                                                ctctGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCcattgca                                                                              >  2:100030/1‑143 (MQ=255)                                                                 tctGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCcattgcat                                                                             >  2:483543/1‑143 (MQ=255)                                                                 tctGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCcattgcat                                                                             >  1:248354/1‑143 (MQ=255)                                                                 tctGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCAAAGATTTTATTTTCTGTTGGGCcattccat                                                                             >  2:452535/1‑143 (MQ=255)                                                                    gAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTTACAGATTTTATTTTCTGTTGGGCCattgcattgc                                                                          >  2:97049/1‑143 (MQ=255)                                                                     aaaTGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACACAATAAAAATTATACTTTTAATGTGCTATACGTTATTCTGCGCGGGTTATATGACTTTATTGTCACAGATTTTATTCTCGGTTGGGCCATTGCATTGcc                                                                         >  2:612263/1‑143 (MQ=255)                                                                      aaggATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGGTATATGCCTTTAATGTCCCCAATTCTACTTTCCGTTGGGCCATTACCTTGccc                                                                        >  2:631413/4‑142 (MQ=255)                                                                       aTGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTTCCAc                                                                       >  2:251014/1‑143 (MQ=255)                                                                        ggcaaacatcggcctcgctttcttatgtcaggcacgcaacttcttatcgtatgccgctgaattagcgggagACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCAc                                                                       >  2:257201‑M1/72‑143 (MQ=255)                                                                          ataataAGTCTCGTGA‑ATGTATCGAAGATAATACATACAAACTAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGa                                                                    <  1:627866/143‑1 (MQ=255)                                                                           taataaGTCTGGTGA‑TTGCACTGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGAt                                                                   <  2:489425/143‑1 (MQ=255)                                                                            aataatTATGGTGA‑ATGTATCGAAGAGAATACATACAATATAAAGCTTATCCTTTTAATTTGCTATACGTTATTGTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGAtt                                                                  <  2:263821/143‑1 (MQ=255)                                                                            aataaGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGAtt                                                                  <  1:466930/143‑1 (MQ=255)                                                                             ataaGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTTCCACTGAttt                                                                 >  2:583194/1‑143 (MQ=255)                                                                             ataaGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGAttt                                                                 >  2:587875/1‑143 (MQ=255)                                                                              taaGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGAtttt                                                                <  2:32823/143‑1 (MQ=255)                                                                               aaGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTc                                                               >  1:229272/1‑143 (MQ=255)                                                                                aGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTcc                                                              <  1:380245/143‑1 (MQ=255)                                                                                aGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTcc                                                              <  1:491937/143‑1 (MQ=255)                                                                                aGTCTGGCGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTcc                                                              <  1:284327/143‑1 (MQ=255)                                                                                 ggctcgTGA‑ATGTATCGAAGATAATACATAAAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCa                                                             <  2:12802/138‑1 (MQ=255)                                                                                 gTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATGGCCACTGATTTTCCa                                                             >  2:338607/1‑143 (MQ=255)                                                                                  tCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCaa                                                            <  1:227895/143‑1 (MQ=255)                                                                                  tCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCaa                                                            >  2:537904/1‑143 (MQ=255)                                                                                        tctttattgggtcaggcactcaactgcttatcgtatgccgctgaattagcgggagACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACatat                                                       >  2:587926‑M1/56‑143 (MQ=255)                                                                                        gA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCCCTGATTTTCCCACAtata                                                      >  1:34770/1‑143 (MQ=255)                                                                                            tGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATaaaa                                                   <  1:564639/143‑1 (MQ=255)                                                                                            tGTATCGAAGATAAGACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCGGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATaaaa                                                   <  1:255518/143‑1 (MQ=255)                                                                                              ttaggtcaggcacgcaacttcttatcgtatgccgctgaattagcgggagACGTTATTCTGCGCGGGTTATATGCCTTTCTTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACAtataaagcg                                                 <  2:478131‑M1/94‑4 (MQ=255)                                                                                              tATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATGGCATTGCCACTGATTTTCCAACCTATAAAAAg                                                 >  2:87456/1‑143 (MQ=255)                                                                                               aTCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTTTCGCTCGTGATTCTCAATGTCATGTTTTTCTTTTGTTCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGa                                                <  1:655302/143‑1 (MQ=255)                                                                                                tCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATCCGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGAc                                               >  1:628278/1‑143 (MQ=255)                                                                                                tCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATCAAAAGAc                                               >  1:378508/1‑143 (MQ=255)                                                                                                tCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGAc                                               >  1:436408/1‑143 (MQ=255)                                                                                                tCGAAGATAATACATACAAAATAAAAATAATACTTTTAATTTGCTATACGTTATTCTACGCGGGTAATATGCCTTTGTTGTCACAGATTTTATCTTCTGTTGGGCCATTGCATTGCCACTGATTTTCGAACATATCAACAGAc                                               >  2:653942/1‑143 (MQ=255)                                                                                                 cGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAACGACa                                              >  2:273115/1‑143 (MQ=255)                                                                                                 cGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACa                                              <  1:545868/143‑1 (MQ=255)                                                                                                  gAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCGTTGCCACTGAGTTTCCAACATATAAACAGACaa                                             >  2:367801/1‑143 (MQ=255)                                                                                                   aaGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTCTATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCACTGCCACTGATTTCCCAACATATAAAAAGACAAg                                            >  2:5843/1‑143 (MQ=255)                                                                                                   aaGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACCTATAAAAAGACAAg                                            >  2:115758/1‑143 (MQ=255)                                                                                                     gATAATACATACAAAATAAAAATTATGCTTTTAATTTGCTATACGTTATTCTGCGCGAGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATGTTCCAACATATAAAAAGACAAGcc                                          <  2:43908/143‑1 (MQ=255)                                                                                                           acatacaAAATAAAAATTATACTTTTTATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACa                                    <  2:212991/143‑1 (MQ=255)                                                                                                           acatacaAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACa                                    >  1:397902/1‑143 (MQ=255)                                                                                                             atacaAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAgt                                  >  2:290445/1‑143 (MQ=255)                                                                                                                 aaaaTAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAgtcgtc                              >  1:570327/1‑143 (MQ=255)                                                                                                                    aTAAAAATTATACTCTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCgg                           <  1:177697/143‑1 (MQ=255)                                                                                                                     tAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCggg                          >  2:130782/1‑143 (MQ=255)                                                                                                                          aTTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCtttt                     >  1:481106/1‑143 (MQ=255)                                                                                                                           ttATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCttttt                    <  2:238300/143‑1 (MQ=255)                                                                                                                           tgccgctgaattagcgggagACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCCTTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGGCCgggctatgt                    <  1:67663‑M1/123‑5 (MQ=255)                                                                                                                               aCTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCttttttttt                <  1:490321/143‑1 (MQ=255)                                                                                                                                cTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTa               <  1:656541/143‑1 (MQ=255)                                                                                                                                cTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTa               <  2:290330/143‑1 (MQ=255)                                                                                                                                cTTTTAATTTGCGATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTa               <  1:197062/143‑1 (MQ=255)                                                                                                                                 ttttATGTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTGATTGTCACAGATTTTATTTTCTGTTGAGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACACGCCGGGACAGTCGTCCGGGCTTTTTTTTTAg              <  2:80599/143‑1 (MQ=255)                                                                                                                                 ttttAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAg              >  2:65768/1‑143 (MQ=255)                                                                                                                                 ttttAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCACGAAAAATCGTCCCGGCTTTTTTTTCAg              >  2:45602/1‑143 (MQ=255)                                                                                                                                   ttAATTCGCTAGACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAGCATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGaa            <  2:238724/143‑1 (MQ=255)                                                                                                                                    tAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAAt           <  1:537904/143‑1 (MQ=255)                                                                                                                                     tgcgcgggggGCGTTAGTCTGCGCGGGTTATGTGCCTTTCTTGTCACAGATTTTATTTTCTGTTGGGCCCTTGCAGTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAAtt          >  1:412690‑M1/11‑143 (MQ=255)                                                                                                                                      aTTTGCTATACGTTATTCTGCGCTGCTTATATGCATTTATTGTCACCGATTTTAGTTACTGTAGGGCCATTGCATTGCCACTGATTTTCGAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTg         <  2:33068/143‑1 (MQ=255)                                                                                                                                      aTTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGCACAGTCGTCCGGGCTTTTTTTTTATAAttc         >  2:450832/1‑142 (MQ=255)                                                                                                                                       tttGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCACCATATGAATAGACACACCCGAACAGGCGTCCGGGCTTTTTTTTTCGAATTgg        >  2:217006/1‑143 (MQ=255)                                                                                                                                       tttGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTgg        <  2:476958/143‑1 (MQ=255)                                                                                                                                       tttGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTgg        <  1:190149/143‑1 (MQ=255)                                                                                                                                       tttGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGCCCGGGCTTTTTTTTTAGTAtttg        >  2:177379/1‑141 (MQ=255)                                                                                                                                       agcgggagACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTgg        >  2:29291‑M1/9‑143 (MQ=255)                                                                                                                                        ttGCTATACTTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGa       <  1:523880/143‑1 (MQ=255)                                                                                                                                            tataCGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAAt   >  1:651075/1‑143 (MQ=255)                                                                                                                                            tataCGGTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAAt   <  1:523434/143‑1 (MQ=255)                                                                                                                                             ttaCGTTATTCTGCGCGGGTTATCGGCCTTTATTGTCACAGATTTTATTTTCTGCTGGGCCATTGCATCGCCACTGATTTTCCATTATCTCAAAAGGCGTGGCAGAACATTCGTCCGGGCTTTTTTTTTAGAATTGGATAATc  <  2:141336/142‑1 (MQ=255)                                                                                                                                               |                                                                                                                                             AAGTTCAGTTAGCCGATAAATATCATTTGTTACGCCTTAAGTAAAACCTTAATCAAATAATTCCTCTGAAATGATAATAAGTCTGGTGA‑ATGTATCGAAGATAATACATACAAAATAAAAATTATACTTTTAATTTGCTATACGTTATTCTGCGCGGGTTATATGCCTTTATTGTCACAGATTTTATTTTCTGTTGGGCCATTGCATTGCCACTGATTTTCCAACATATAAAAAGACAAGCCCGAACAGTCGTCCGGGCTTTTTTTTTAGAATTGGATAATC  >  NC_000913/1436964‑1437245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.