New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1465092 =47 (1.890)4 (0.180) 4/242 NT 8.8% intergenic (+31/+73) paaY/ynbG 2‑hydroxycyclohepta‑1,4,6‑triene‑1‑carboxyl‑CoA thioesterase/uncharacterized protein YnbG
?NC_000913 1465125 = 40 (1.760)intergenic (+64/+40) paaY/ynbG 2‑hydroxycyclohepta‑1,4,6‑triene‑1‑carboxyl‑CoA thioesterase/uncharacterized protein YnbG

TCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATT  >  NC_000913/1464983‑1465267
                                                                                                                                              |                                                                                                                                                
tCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATCAAGCAGAGTTATGTTTAAGCTCTGCtttatt                                                                                                                                                  >  2:271958/1‑143 (MQ=255)
tCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTCATGTTTAAGCTCTGCtttatt                                                                                                                                                  >  1:91856/1‑143 (MQ=255)
 cAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCtgtattt                                                                                                                                                 >  2:68758/1‑143 (MQ=255)
  catgaaatatataaattttgtaaacaatataacttactaacaaaaacctcattctcattataaataattatatgatgaaaaaacggtatgaattaatactcaaataaATAAAGCAGAGTTATGTTTAAGCTCTGCtttattta                                                                                                                                                >  2:342514‑M1/108‑143 (MQ=255)
       aataaataaattgtgtatataatataaattacaaattaaaaccacattctcattataaataattatatgatgaaaaaacggtatgaattaatactcaaataaATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGa                                                                                                                                           >  2:456563‑M1/103‑143 (MQ=255)
            aTTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTAtt                                                                                                                                      <  2:319695/143‑1 (MQ=255)
             ttGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTCTAACAATACGGAATGTTTATGGTTAAGCTCTGCTTTATTTATTTGAGTATTa                                                                                                                                     <  1:205093/143‑1 (MQ=255)
              aaattgtgtatataatataaattacaaattaaaaccacattctcattataaataattatatgatgaaaaaacggtatgaattaatactcaaataaATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTaa                                                                                                                                    >  2:301692‑M1/96‑143 (MQ=255)
                cGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAAtt                                                                                                                                  >  1:416637/1‑143 (MQ=255)
                     aaTTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATAc                                                                                                                             >  1:474277/1‑143 (MQ=255)
                           aCCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGtttt                                                                                                                      >  1:207521/1‑143 (MQ=255)
                              tGGCCGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGCAACAGTAACAGATGTAACATTATTTTGTCCCTTTAATTATAAAGCCGAGATATGATTAAGCTCTGCTTTCTTTATGTGCGTAGTAATTCATACCGTTTTTtc                                                                                                                   >  1:424265/1‑143 (MQ=255)
                                            tGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGGTGTAAAATTTTTTTGTCCCTTTAATTATAATGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAattatt                                                                                                     <  2:7652/143‑1 (MQ=255)
                                            tGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAattatt                                                                                                     >  2:9751/1‑143 (MQ=255)
                                               tATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAAttatttat                                                                                                  >  1:125334/1‑143 (MQ=255)
                                                aTTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTACTTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTtata                                                                                                 >  2:239994/1‑143 (MQ=255)
                                                aTTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTtata                                                                                                 <  1:167819/143‑1 (MQ=255)
                                                 tgtgatgaGGATCAGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATaa                                                                                                <  1:192100/141‑1 (MQ=255)
                                                       gagaATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAGTgagca                                                                                          >  1:449979/1‑141 (MQ=255)
                                                        agaATCTGCGTCCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAAt                                                                                        <  2:440825/143‑1 (MQ=255)
                                                        agaATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTCATTCTTTCTGTTTTTTCATCATATAATTATTTATAATGAGAAt                                                                                        >  1:88648/1‑143 (MQ=255)
                                                        agaATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAAt                                                                                        >  1:379821/1‑143 (MQ=255)
                                                          aaTCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTANTAATTCATACCGTTTTTTCATCATATAATTCTTTATAATGATAAtgt                                                                                      >  2:67768/1‑143 (MQ=255)
                                                           aTCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTGTAGTGAGCAtgtg                                                                                     >  2:228812/1‑143 (MQ=255)
                                                            tCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTgg                                                                                    >  2:49224/1‑143 (MQ=255)
                                                               gCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATCTTTAAGCTCTGCTTTATTTATTTGAGTATTACTTCATACCGTTTTTTCATCATATAATACTTTATACTCAGAATGTGGttg                                                                                 >  1:323389/1‑142 (MQ=255)
                                                                 gACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTa                                                                               >  1:404284/1‑143 (MQ=255)
                                                                  aCCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCCTCATATCATTATTTATAATGAGAATGTGGTTTTaa                                                                              <  1:489924/143‑1 (MQ=255)
                                                                   ccGAAACAGTAACAGATGTAAAATTATTTTGTCACTTTAATTATAAAGCAGAGTTATGTTTAAGCTGTGCTTTATTTATTTGAGTATTAATTCATAACGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAAt                                                                             >  2:311093/1‑143 (MQ=255)
                                                                    cGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAAtt                                                                            >  1:21990/1‑143 (MQ=255)
                                                                     gAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTAGTTATTTGAGTATTAATTCATACCGTTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAAtt                                                                            >  2:174151/1‑143 (MQ=255)
                                                                          aGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTCTTTGAGTATTAATTCATACCTTTTTTTCATCATATACTTATTTATAATTAGAACTTGGTTTTTAttttttat                                                                      >  2:186756/1‑138 (MQ=255)
                                                                             aaCAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCATAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATtta                                                                   <  2:203175/143‑1 (MQ=255)
                                                                              aCAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttat                                                                  >  1:312899/1‑143 (MQ=255)
                                                                                aGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATCATGAGACTGTGGTTTTAGTGTGTAATttatat                                                                >  1:87054/1‑143 (MQ=255)
                                                                                   tGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATttatattat                                                             >  1:397552/1‑143 (MQ=255)
                                                                                   tGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTATTCATCATATAATTATTTTTATTGAGAATGTGGTTTTAATTTGTAATttatattat                                                             >  2:232303/1‑143 (MQ=255)
                                                                                      aaaaTTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTAATTTAATGATACCCGTGTTTTTAATTTGTAATTTATATtatata                                                          <  2:267756/143‑1 (MQ=255)
                                                                                        aaTTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATaca                                                        >  2:440817/1‑143 (MQ=255)
                                                                                         attattTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATacac                                                       >  1:416047/1‑143 (MQ=255)
                                                                                           ttttctGTCCTTTTAATTATAAAGCATATTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAAAAATTGGATTGTCTGAATTTGTAATTTATATTATATACACaa                                                     <  2:148677/138‑1 (MQ=255)
                                                                                           gattTTGGCCCTTTAATTATAAAGCAGAGTTATGTTTACGTACTTCGTTATTTATTTGAGAATTAATTCATACCGTTTTTTCATCATATAGTTATTCATATTGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACaa                                                     <  2:78254/142‑1 (MQ=255)
                                                                                             ttttGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAtt                                                   >  2:443566/1‑143 (MQ=255)
                                                                                              ttaatactcaaataaataaagcagagcttaaacataactctgctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAAttt                                                  >  2:301692‑M2/49‑143 (MQ=255)
                                                                                                 gTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtata                                               <  1:361539/143‑1 (MQ=255)
                                                                                                     tcaaataaataaagcagagcttaaacataactctgctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTtatttatt                                           >  2:456563‑M2/42‑143 (MQ=255)
                                                                                                        tAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCa                                        <  2:464109/143‑1 (MQ=255)
                                                                                                          taaataaagcagagcttaaacataactctgctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGAGGTTTTTGTTAGTAAGTTATATTGTTTACAAAATTTATATATTTCATg                                      >  2:342514‑M2/37‑143 (MQ=255)
                                                                                                          aTTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATg                                      <  2:351696/143‑1 (MQ=255)
                                                                                                             ATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTc                                   >  1:115145‑M1/1‑143 (MQ=255)
                                                                                                                  gcagagcttaaacataactctgctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCttttt                              >  2:35168‑M2/29‑143 (MQ=255)
                                                                                                                  GCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTCTATACACAATTTATATATTTCATGGTCttttt                              >  1:182959‑M1/1‑143 (MQ=255)
                                                                                                                  GCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCttttt                              >  2:125334‑M1/1‑143 (MQ=255)
                                                                                                                   CAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCtttttt                             >  2:480930‑M1/1‑143 (MQ=255)
                                                                                                                    AGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCttttttt                            >  1:424855‑M1/1‑143 (MQ=255)
                                                                                                                      AGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTAt                          <  1:148882‑M1/143‑1 (MQ=255)
                                                                                                                              ttAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGCTCTTTGGTTATTCACCTGa                  >  2:340819/1‑143 (MQ=255)
                                                                                                                                 aGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAAtt               >  1:281318/1‑143 (MQ=255)
                                                                                                                                   ctctgctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATTGTCTTTTTTTATTCTCCTTaatttt             >  2:13121‑M2/12‑141 (MQ=255)
                                                                                                                                       gctttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAAtt         <  1:28014‑M2/136‑1 (MQ=255)
                                                                                                                                         tttatTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGACTTATACTtgt       >  2:282413‑M2/6‑143 (MQ=255)
                                                                                                                                          ttatTTATTTGAGTATTAATTCATACCGTTTTTTTATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATtgtg      <  2:231718‑M2/139‑1 (MQ=255)
                                                                                                                                             tTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATGTTTCATGTTTTTTTTTTTTTCACTTGAATTTTAATTAtgatt   >  2:249765‑M2/2‑141 (MQ=255)
                                                                                                                                              ttatttGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGCAtt  >  1:350966/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                                
TCAAGTCGAGCCATTGCGGGAAATTGAACCTGGCAGGAAACGCCTGGTATTTGATGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTGAGTATTAATTCATACCGTTTTTTCATCATATAATTATTTATAATGAGAATGTGGTTTTAATTTGTAATTTATATTATATACACAATTTATATATTTCATGGTCTTTTTTTATTCACCTGAATTATAATTGTGAATT  >  NC_000913/1464983‑1465267

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.