BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3984240 =	NA (NA)	4 (0.060)	3/250	NT	NA	noncoding (20/34 nt)	other	REP287a
*	?	NC_000913	3984302 =	NA (NA)	4 (0.060)	3/250	NT	NA	noncoding (23/36 nt)	other	REP287b

Only 100 of 149 total aligned reads displayed.

CTACCGCCATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTG  >  NC_000913/3984098‑3984380

 tccgatgggtgtaccgctacagaccgaaatgcacgcgtatatggagatcctgaaaaaatatccaccacgcgcgcagattaaatctgactaagccggcgctatcgttgagatcttcctttgccggatgcgatgctgacgcatCt                                                                                                                                             >  1:54248‑M1/142‑143 (MQ=255)

  ccgatgggggtaccgctacagaccgaaatgcacgcgtatatggagatcctgaaaaaatatccaccacgcgcgcagattaaatctgactaagccgtcgctatcgctgagatctgcctttgccggatgcgatgctgacgcatCtt                                                                                                                                            >  2:161571‑M1/141‑143 (MQ=255)

     gCCATATCTTAAAGCAATGGCTGATTTGGTAGGGTAGGGCCCGCCGGCCAGCGACAGTATGCATGCGCACTTGCGGGTGGCGAGTAACGAGAAATCGGCGGCCGCCTGCGGCTGACTGCCGGGCGCGGCGGAAACGCCTTagc                                                                                                                                         >  2:93707/1‑141 (MQ=255)

       cATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTGGCAGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGGTTGCCGGATGCGGCGTAAACGCCTTATCCg                                                                                                                                       >  1:426772/1‑143 (MQ=255)

          atCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCGTTTGCTGGTGGTGAGGAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGGTGCGGCGTAGACGCCCGATCCAGca                                                                                                                                    >  2:84232/1‑142 (MQ=255)

          atCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                                                                                                                    <  1:510567/143‑1 (MQ=255)

          atCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTAGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGcc                                                                                                                                    <  1:41740/143‑1 (MQ=255)

           tCTTAGAGCAATGGCTGATGTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCt                                                                                                                                   <  2:985721/143‑1 (MQ=255)

            cagaaaGCAACCGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATTCATGCGCATTTGCTGGTTGTGAGTAAGTAGAAATCGGCGGCCGCCGGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTa                                                                                                                                  <  1:736149/140‑1 (MQ=38)

             ttAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGTTTGATTGCCTGATGCGGCGTAAAACCCTTATCCGGCCTAc                                                                                                                                 >  1:344069/1‑143 (MQ=255)

               aaaGCACTGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGAGAGTAAGTAGAAATCTGCTGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAt                                                                                                                               <  2:1247508/143‑1 (MQ=255)

                gctacagaccgaaatgcacgcgtatatggagatcctgaaaaaatatccaccacgcgcgcagattaaatctcactaagccggcgctatcgctgagatctccctttgccggatgcgatgctgacgcatCTTCTCCGGCCGacagg                                                                                                                              <  2:844319‑M1/17‑3 (MQ=255)

                   cAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTCTCCGGCCTACATGacc                                                                                                                           >  2:810208/1‑141 (MQ=255)

                   cAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGa                                                                                                                             <  2:1036594/141‑1 (MQ=255)

                   cAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGa                                                                                                                             >  1:1036594/1‑141 (MQ=255)

                      tGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTg                                                                                                                        <  1:450902/143‑1 (MQ=255)

                       ggCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGc                                                                                                                       >  1:769352/1‑143 (MQ=255)

                        gCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGCAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAACCGCCCTATCCGGCCTACATGATCGTGCa                                                                                                                      >  2:223864/1‑143 (MQ=255)

                        gCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACACGATCGTGCa                                                                                                                      >  1:522935/1‑143 (MQ=255)

                        gCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGAGGGGAGTCAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAAGGCCGTATCCGGCCTACAGGAGCGTGCa                                                                                                                      >  2:617362/1‑143 (MQ=38)

                        gCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTAAGCATGCGAATTTGCTGGTGGTGAGTAAGTAGCAATCGGCGTCCGTCTGCGGCTGATGGCTCGTTGCGGCCTTGACGCCTTCTCCGTCGTACATGCTCGTGCa                                                                                                                      >  1:799328/1‑143 (MQ=255)

                          tGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTCCATGCTCGTGCaac                                                                                                                    >  1:846358/1‑142 (MQ=255)

                          tGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCaaa                                                                                                                    >  1:1199716/1‑143 (MQ=255)

                             tttGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCACATTc                                                                                                                 >  1:844319/1‑143 (MQ=255)

                               tGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCaa                                                                                                               <  1:1098689/143‑1 (MQ=255)

                                 cTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGCGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCACTa                                                                                                             >  1:734306/1‑143 (MQ=255)

                                  tGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAGGATCGTGCGAATTCAATaa                                                                                                            >  1:695573/1‑143 (MQ=255)

                                  tGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCAGCCTACATGATCGTACCAATTCAATaa                                                                                                            >  1:764394/1‑143 (MQ=255)

                                  tGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATCTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTACACGCCTTGTCCGGCCTAGATGACCGTGCAAATTGAATaa                                                                                                            >  2:442219/1‑143 (MQ=255)

                                    gcgcACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAAt                                                                                                          <  2:1200582/143‑1 (MQ=255)

                                    gcgcACGGTCGCCCGGCCAGAGACATAATGCATGCGCATTTGCGGGTGGGGAGGAAGTAGAAACCGGCGGCCGCCTGCGGTTTATTGCCGAATGCGGCCTAAACGCCTTATCCCGCCGACATGATCGTGCAAATTCAACaaag                                                                                                          <  1:1188017/143‑2 (MQ=255)

                                        aCGGCCGCCCGGCCAGCCACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCa                                                                                                      <  1:1235652/143‑1 (MQ=255)

                                             cGCCCGGCCAGCGACCTTATGCATGCGCCTTTGCTGGGGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGtt                                                                                                 <  2:560453/143‑1 (MQ=255)

                                              gCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTACTCGGCCTACATGATCGTGCAACTTCGATAAATTGCAGCGGTc                                                                                                >  2:422032/1‑143 (MQ=39)

                                                 cGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGt                                                                                             <  1:896981/143‑1 (MQ=255)

                                                 cGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGt                                                                                             <  1:1250584/143‑1 (MQ=255)

                                                  ggCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTa                                                                                            <  1:971628/143‑1 (MQ=255)

                                                    ccAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAACGTCAATAAATTGCAAGGTTCCGTAgg                                                                                          >  2:804942/1‑143 (MQ=38)

                                                    ccAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAgg                                                                                          >  1:402225/1‑143 (MQ=255)

                                                      aGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTACACGCCTTATCCGGCCTACATGATCGTGCAACTTCAATAACTTGCAGCGTTCTGCAGCCt                                                                                        >  2:67827/1‑143 (MQ=38)

                                                          aCATCATGCATGCGCATTTGCTGGTGGTGACTAACTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCTTAAACGCCTTATCCGGCCTACATGATCGTGCAAACTCAATAAATTGCAGCGTTCTGTAGGCTGGAt                                                                                    <  1:326055/143‑1 (MQ=38)

                                                              ccaccgcgcgcgcagagtaaatctgactaagccggcgctatcgctgagatctgcctttgccggatgcgatgctgacgcatCTTATCCGGCCTACATGGTCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGa                                                                                >  2:186033‑M1/81‑143 (MQ=255)

                                                               ctgcatgcGCGTGTTGTGGCGCGGAGTACGGAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGAt                                                                               <  2:362628/142‑1 (MQ=25)

                                                               atgcatgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGAt                                                                               <  1:770203/143‑1 (MQ=255)

                                                                   atgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCGGTAGGCTGGATAAGAGGCGt                                                                           >  1:705090/1‑143 (MQ=255)

                                                                    tgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGACGCCTGCGGGTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAAGACATTGCAGCGCTCTGTAGGCTGGATAAGATGCggc                                                                          >  2:1051914/1‑141 (MQ=37)

                                                                    cgcgcgcagattaaatctgactaagccggcgctatcgctgagatctgcctttgccggatgcgatgctgacgcatCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTc                                                                          >  1:874438‑M1/75‑143 (MQ=255)

                                                                     gcgcATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCa                                                                         >  1:1184660/1‑143 (MQ=255)

                                                                       gcATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCACTCAATTGCAGCGTTCTGTAGGCTGGATAAGATACGTCAgc                                                                       >  1:36211/1‑143 (MQ=255)

                                                                       gcATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTATGCTGGGCAAGGTGCGTCAgc                                                                       >  1:1224592/1‑143 (MQ=255)

                                                                        cATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgca                                                                      <  1:425888/143‑1 (MQ=255)

                                                                        cATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgca                                                                      <  1:869893/143‑1 (MQ=255)

                                                                          tttGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCGTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATACGTCAgcatc                                                                    <  1:669927/143‑1 (MQ=255)

                                                                          ttggtgggtggtGAGTATGTAGATATCGGCGTCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgcatc                                                                    <  2:1133625/137‑1 (MQ=37)

                                                                               tggtggTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGAGGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTGCTGTAGGCTGGGTAAGATGCGTCAgcatcgcatc                                                               >  1:1506/1‑143 (MQ=255)

                                                                                  tggtggGTAAGTAGAAATGGGCGGGCGCCTGCGGTTGATTGCCGGATGCGGCGTAAGCGTCTTATCCGGCTTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                            <  2:45993/143‑1 (MQ=38)

                                                                                  tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                            <  2:988477/143‑1 (MQ=255)

                                                                                  tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                            >  2:697655/1‑143 (MQ=255)

                                                                                  tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                            >  1:758420/1‑143 (MQ=255)

                                                                                    gtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCa                                                          >  2:413606/1‑143 (MQ=255)

                                                                                     tgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCaa                                                         <  1:1079660/143‑1 (MQ=255)

                                                                                      gAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCaaa                                                        >  2:745365/1‑143 (MQ=255)

                                                                                         taagtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGGCTACATGGTCGTGCAAAGTCAATGAATTGCAGCGTTCTGGAGGGGGGATAGGTTGCGTCAGGATCGCTTCCGGCGAAGGc                                                     >  1:883864/1‑143 (MQ=37)

                                                                                          aagtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCa                                                    <  2:1004003/143‑1 (MQ=255)

                                                                                            gtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGa                                                  >  2:1126637/1‑143 (MQ=255)

                                                                                            gtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGa                                                  >  2:630770/1‑143 (MQ=255)

                                                                                             taGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAgct                                                 >  1:460404/1‑141 (MQ=255)

                                                                                              aGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATCAGATGCGTCAGCATCGCCTCCGGCAAAGCCAGAtc                                                >  1:255813/1‑143 (MQ=255)

                                                                                              aGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGAtc                                                >  2:63210/1‑143 (MQ=255)

                                                                                               gcactCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAAGTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGTAAAGGCAGAtct                                               <  1:496111/139‑1 (MQ=255)

                                                                                                aaaTCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGCTGCGTCTGCATTGCATCCGGCAAAGGCAGAtctc                                              >  1:460424/1‑143 (MQ=255)

                                                                                                aaaTCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCGAAGGCAGAcctc                                              >  1:548832/1‑143 (MQ=255)

                                                                                                 aaccggcggCCGCCGGCGGTTGATTGCCGGATGCGGCGTAAACGCCGTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCa                                             <  1:969878/140‑1 (MQ=255)

                                                                                                 aaTCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCa                                             <  2:1199716/143‑1 (MQ=255)

                                                                                                      gcggcCGCCTGCGGGTGAGTGCCGGAGGCGGCGTAAACGCCTTATCCGGCCGACATGATCGTGCAAATCCAATAAAGTGCAGCGTGCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGAt                                        <  2:498519/143‑1 (MQ=38)

                                                                                                           cgccTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAgcgc                                   <  2:758420/143‑1 (MQ=255)

                                                                                                            gccTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGcc                                  <  1:714855/143‑1 (MQ=255)

                                                                                                            gccTGCGGTTGATTGCCGGATGCGACGTAAACGACTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATAAGGCAAAGGCAGATCTCAGCGAAAgcgca                                  >  2:61223/1‑142 (MQ=38)

                                                                                                               tGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGGTAGCGCCGGc                               >  1:354796/1‑143 (MQ=255)

                                                                                                               tGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGc                               <  1:450696/143‑1 (MQ=255)

                                                                                                                 cGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCGGGCtt                             >  1:102506/1‑143 (MQ=255)

                                                                                                                  ggTTGATTGGCGGATGCGGCGTAAACGCCTTAGCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTa                            <  2:739134/143‑1 (MQ=255)

                                                                                                                   gttgttTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAg                           <  2:978917/143‑1 (MQ=255)

                                                                                                                    ttGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGCTCTCAGCGATAGCGCCGGCTTAGt                          >  1:807512/1‑143 (MQ=255)

                                                                                                                    ttGATGGCCGGATGCGGCGTAAACGCCTGATCCGGCCTACATGATCGTGCAAATGCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGt                          <  2:438564/143‑1 (MQ=255)

                                                                                                                        ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGGGCCGGCTTAGTCCGa                      >  2:38068/1‑143 (MQ=255)

                                                                                                                        ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTcggc                      >  1:484417/1‑140 (MQ=255)

                                                                                                                        ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGa                      >  1:1088448/1‑143 (MQ=255)

                                                                                                                         tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGAt                     <  1:1219798/143‑1 (MQ=255)

                                                                                                                         tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGAt                     >  1:835495/1‑143 (MQ=255)

                                                                                                                           ccGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTGAGCttt                   >  1:163414/1‑143 (MQ=255)

                                                                                                                           ccGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGAttt                   >  1:1109177/1‑143 (MQ=255)

                                                                                                                                  cggcgTAAACGCCTTATCCGGCCTACATGAGCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTgc            <  1:1143925/143‑1 (MQ=255)

                                                                                                                                   ggcgTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTgcg           >  1:298363/1‑143 (MQ=255)

                                                                                                                                    gcgTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAAtgtgtcc          >  2:1109355/1‑140 (MQ=255)

                                                                                                                                     cgTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCCACGGCAGATCGCAGCGATAGCGCCGCCCTAGTCAGACTCAATCTgcgcg         >  1:1064155/1‑143 (MQ=38)

                                                                                                                                         aaCGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTCCTGTAGGCTGGATAAGATGGGACAGCATCGCATCCGGCAAAGGCAGAGCGCAGGGCGAGCGCAGGCTTAGGCGGAGTTGATCTgcgcgaggg     >  2:775871/1‑139 (MQ=25)

                                                                                                                                           cGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtgcc   >  2:229447/1‑141 (MQ=255)

                                                                                                                                            gCCTTCTCCCGCCTACATGATCGTGCTAATTCAATAAACTGCAGCGTCCTGGAGGCTGGAGAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtggtg  <  2:506431/143‑1 (MQ=255)

                                                                                                                                            gCCTTACCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtggtg  <  2:130705/143‑1 (MQ=255)

CTACCGCCATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGCGACATTATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTG  >  NC_000913/3984098‑3984380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.