New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3984240 =NA (NA)4 (0.060) 3/250 NT NA noncoding (20/34 nt) other REP287a
?NC_000913 3984302 = NA (NA)noncoding (23/36 nt) other REP287b

Only 100 of 144 total aligned reads displayed.

TATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCGGTACACCCATCGGAAT  >  NC_000913/3984160‑3984444
                                                                                                                                              |                                                                                                                                              
ccaccgcgcgcgcagagtaaatctgactaagccggcgctatcgctgagatctgcctttgccggatgcgatgctgacgcatCTTATCCGGCCTACATGGTCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGa                                                                                                                                                >  2:186033‑M1/81‑143 (MQ=255)
 ctgcatgcGCGTGTTGTGGCGCGGAGTACGGAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGAt                                                                                                                                               <  2:362628/142‑1 (MQ=25)
 atgcatgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGAt                                                                                                                                               <  1:426975/143‑1 (MQ=255)
 atgcatgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGAt                                                                                                                                               <  1:770203/143‑1 (MQ=255)
     atgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCGGTAGGCTGGATAAGAGGCGt                                                                                                                                           >  1:705090/1‑143 (MQ=255)
      tgcGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGACGCCTGCGGGTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAAGACATTGCAGCGCTCTGTAGGCTGGATAAGATGCggc                                                                                                                                          >  2:1051914/1‑141 (MQ=37)
      cgcgcgcagattaaatctgactaagccggcgctatcgctgagatctgcctttgccggatgcgatgctgacgcatCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTc                                                                                                                                          >  1:874438‑M1/75‑143 (MQ=255)
         gcATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCACTCAATTGCAGCGTTCTGTAGGCTGGATAAGATACGTCAgc                                                                                                                                       >  1:36211/1‑143 (MQ=255)
         gcATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgc                                                                                                                                       <  1:768239/143‑1 (MQ=255)
          cATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgca                                                                                                                                      <  1:869893/143‑1 (MQ=255)
          cATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgca                                                                                                                                      <  1:425888/143‑1 (MQ=255)
          cATTTGCTGGTGGTGAGTAAGTAGAAACCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgca                                                                                                                                      <  1:424393/143‑1 (MQ=255)
            tttGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCGTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATACGTCAgcatc                                                                                                                                    <  1:669927/143‑1 (MQ=255)
            ttggtgggtggtGAGTATGTAGATATCGGCGTCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgcatc                                                                                                                                    <  2:1133625/137‑1 (MQ=37)
            gtggcgggtgggGAGGAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgcatc                                                                                                                                    <  1:454257/137‑1 (MQ=255)
            cttGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGAGTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgcatc                                                                                                                                    <  1:197066/142‑1 (MQ=255)
                 tggtggTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAgcatcgcatc                                                                                                                               >  1:816771/1‑143 (MQ=255)
                 tggtggTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGAGGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTGCTGTAGGCTGGGTAAGATGCGTCAgcatcgcatc                                                                                                                               >  1:1506/1‑143 (MQ=255)
                    tggtggGTAAGTAGAAATGGGCGGGCGCCTGCGGTTGATTGCCGGATGCGGCGTAAGCGTCTTATCCGGCTTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                                                                                            <  2:45993/143‑1 (MQ=38)
                    tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                                                                                            >  1:758420/1‑143 (MQ=255)
                    tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                                                                                            <  2:988477/143‑1 (MQ=255)
                    tggtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCgg                                                                                                                            >  2:697655/1‑143 (MQ=255)
                      gtgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCa                                                                                                                          >  2:403344/1‑143 (MQ=255)
                       tgAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCaa                                                                                                                         <  1:1079660/143‑1 (MQ=255)
                       ggAGTAAGTAGAACTGGGTGTGCTCTGGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCaa                                                                                                                         <  2:1169439/142‑1 (MQ=37)
                        gAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCaaa                                                                                                                        >  2:745365/1‑143 (MQ=255)
                           taagtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGGCTACATGGTCGTGCAAAGTCAATGAATTGCAGCGTTCTGGAGGGGGGATAGGTTGCGTCAGGATCGCTTCCGGCGAAGGc                                                                                                                     >  1:883864/1‑143 (MQ=37)
                           taagtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCCGCGTTCTGTCGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGc                                                                                                                     >  1:5072/1‑143 (MQ=255)
                            aagtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCa                                                                                                                    <  2:1004003/143‑1 (MQ=255)
                              gtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAACTTGCAGCGTTCTGCAGGCTGGCTAAGATGCGTCAGCATCGCATCCGGCACAGCCAGa                                                                                                                  >  1:353948/1‑143 (MQ=38)
                              gtaGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGa                                                                                                                  >  2:1126637/1‑143 (MQ=255)
                               taGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAgct                                                                                                                 >  1:460404/1‑141 (MQ=255)
                               taGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGAt                                                                                                                 <  2:625535/143‑1 (MQ=255)
                               taGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGAt                                                                                                                 <  1:1070445/143‑1 (MQ=255)
                               taGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATACGGAGTAAACGCCTTATCCGGCCTACATGATAGAGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGACAGCATCGCATCCGGCAACGGCAGag                                                                                                                 >  2:784098/1‑142 (MQ=38)
                                aGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGAtc                                                                                                                >  2:63210/1‑143 (MQ=255)
                                 gcactCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAAGTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGTAAAGGCAGAtct                                                                                                               <  1:496111/139‑1 (MQ=255)
                                   aaccggcggCCGCCGGCGGTTGATTGCCGGATGCGGCGTAAACGCCGTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCa                                                                                                             <  1:969878/140‑1 (MQ=255)
                                   aaTCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCa                                                                                                             <  2:1199716/143‑1 (MQ=255)
                                            ccgccTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCCGCGATAgcg                                                                                                    >  1:898968/1‑143 (MQ=255)
                                             cgccTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAgcgc                                                                                                   <  2:758420/143‑1 (MQ=255)
                                              gccTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGcc                                                                                                  <  1:714855/143‑1 (MQ=255)
                                                   cGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCGGGCtt                                                                                             >  1:102506/1‑143 (MQ=255)
                                                    ggTTGATTGGCGGATGCGGCGTAAACGCCTTAGCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTa                                                                                            <  2:739134/143‑1 (MQ=255)
                                                     gttgttTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAg                                                                                           <  2:978917/143‑1 (MQ=255)
                                                      ttGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGCTCTCAGCGATAGCGCCGGCTTAGt                                                                                          >  1:807512/1‑143 (MQ=255)
                                                      ttGATGGCCGGATGCGGCGTAAACGCCTGATCCGGCCTACATGATCGTGCAAATGCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGt                                                                                          <  2:438564/143‑1 (MQ=255)
                                                       tGATTGCCGGAGGCGGCGTAACCGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTc                                                                                         <  2:573759/143‑1 (MQ=255)
                                                          ttGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGGGCCGGCTTAGTCCGa                                                                                      >  2:38068/1‑143 (MQ=255)
                                                           tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGAt                                                                                     <  1:1219798/143‑1 (MQ=255)
                                                             ccGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGAttt                                                                                   >  1:1109177/1‑143 (MQ=255)
                                                             ccGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCCTAGCCAGAttt                                                                                   >  1:1233560/1‑143 (MQ=255)
                                                                    cggcgTAAACGCCTTATCCGGCCTACATGAGCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTgc                                                                            <  1:1143925/143‑1 (MQ=255)
                                                                     ggcgTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTgcg                                                                           >  1:298363/1‑143 (MQ=255)
                                                                      gcgTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAAtgtgtcc                                                                          >  2:1109355/1‑140 (MQ=255)
                                                                        gTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCCTCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGATTAGTCAGAATTAATCTgcgcgc                                                                        >  1:1121761/1‑143 (MQ=255)
                                                                            aCGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTCAGTCAGACTTCATCTGCGCGCgcgg                                                                    >  2:823816/1‑143 (MQ=255)
                                                                             cGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtgcc                                                                   >  2:229447/1‑141 (MQ=255)
                                                                              gCCTTCTCCCGCCTACATGATCGTGCTAATTCAATAAACTGCAGCGTCCTGGAGGCTGGAGAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtggtg                                                                  <  2:506431/143‑1 (MQ=255)
                                                                              gCCTTACCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCgtggtg                                                                  <  2:130705/143‑1 (MQ=255)
                                                                                tTTATCCGGCCTAAATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGa                                                                >  2:344069‑M1/2‑143 (MQ=255)
                                                                                 TTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAACGGCAGATCTCAGCGATAGCGCCGGCTTGGTCCGATTTAATCTGCGCGCGTGGTGGat                                                               <  1:121372‑M1/143‑1 (MQ=255)
                                                                                 TTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGGTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCGTAGTCAGATTTAATCTGCGCGCGCGGTGGat                                                               <  1:1197310‑M1/143‑1 (MQ=255)
                                                                                     ccGGCCTACATGATCGTGCAAATTCACTAAATTGCCGCGTTGTGTAAGCTGGATAAGATGCGTAAGCATCGCGTACGGGAAAGGCAGATGTTAGCGATAGCGGCGGCTTGGTACGCTTTAATCTTCGCGCGTGGTGGatctgt                                                           >  1:245611/1‑139 (MQ=255)
                                                                                      CGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCATAGGCAGAGCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATAtttt                                                          <  1:474825‑M1/143‑1 (MQ=255)
                                                                                       ggCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGAGTGGTGGATAtttct                                                         >  2:654766/1‑141 (MQ=255)
                                                                                       ggCCTACAGGATCGGGCAAATTCAATAAAGTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATAttttt                                                         <  2:376977/143‑1 (MQ=255)
                                                                                        gCCTACATGATCGGGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATAtttttt                                                        <  2:1095535/143‑1 (MQ=255)
                                                                                          cTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCa                                                      <  1:963848/143‑1 (MQ=255)
                                                                                                gATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGAtct                                                <  1:946412/143‑1 (MQ=255)
                                                                                                     tGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGCTATTTTTTCCGGATCTCCatc                                           >  2:172154/1‑142 (MQ=255)
                                                                                                     tGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCata                                           >  1:566878/1‑143 (MQ=255)
                                                                                                       cAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGCTCTCCAcata                                         >  1:460761/1‑143 (MQ=255)
                                                                                                       cAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTGTTGCTGGATCTCCAtcta                                         >  2:308632/1‑143 (MQ=255)
                                                                                                        aaaTTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATAc                                        >  1:1143606/1‑143 (MQ=255)
                                                                                                          aTTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATAcgc                                      <  2:566878/143‑1 (MQ=255)
                                                                                                           ttCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATAcgcg                                     >  2:868902/1‑143 (MQ=255)
                                                                                                            tCACTAAATTGCAGCGTTCTGTAGGCTCGATACGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGt                                    <  2:688997/143‑1 (MQ=255)
                                                                                                             cAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTg                                   >  2:613712/1‑143 (MQ=255)
                                                                                                              aaTAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATATGCGCGCGCGGTGGAGAGTTCTTCAGGATCTCCATATCCGCGAGc                                  >  2:1226095/1‑143 (MQ=38)
                                                                                                               agaaaTTGCAGCGTTCTGTAGGCTGGATAAGAGGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCa                                 <  1:1188852/141‑1 (MQ=255)
                                                                                                               aTAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCGGATCTGCGCGATCGTGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGGTATTTTTTCAGGATCTCCATATACGCGTGCa                                 >  1:117861/1‑143 (MQ=39)
                                                                                                               aTAAATTGCAGCGTGCCGTAGGCTGGATAAGACGCGTCAGCACCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCa                                 <  1:697655/143‑1 (MQ=255)
                                                                                                                 gaaTTGCACAGCTCTGAAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCAtt                               <  1:223864/142‑1 (MQ=255)
                                                                                                                    ttGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCTCCGGCTTCGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCg                            <  2:229252/143‑1 (MQ=255)
                                                                                                                    ttGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCg                            <  1:630770/143‑1 (MQ=255)
                                                                                                                    tggCAGCGTTCTGGAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCg                            <  1:103291/141‑1 (MQ=255)
                                                                                                                       cAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTc                         >  1:1057155/1‑143 (MQ=255)
                                                                                                                        aGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATGCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTGAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCt                        <  2:255813/143‑1 (MQ=255)
                                                                                                                        aGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGCGGACATTCTTTCAGGATCTCCATATACGCGTGCATTTCGGTCt                        >  2:232734/1‑143 (MQ=255)
                                                                                                                             tctgtagggcggataagTTTGGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGc                   <  2:5029‑M2/126‑1 (MQ=255)
                                                                                                                             tCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGCTAGCGCCGGCTTAGTCCGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGc                   >  1:998964/1‑143 (MQ=255)
                                                                                                                             tCTGGAGGCTGGATAAGATGCGGCAGCAGCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGGTTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGc                   <  2:312537/143‑1 (MQ=255)
                                                                                                                             cctgtcggccggagaagATGCGTCAGCATCGCATCCGGCAAAGGGAGATCTCAGCGATAGCGCCGGCTTAGTGAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGc                   <  2:844319‑M2/126‑1 (MQ=255)
                                                                                                                               tGTAGGCTGGATAAGTTGCGTCAGCATCGCATCCTGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCgg                 <  2:529062/143‑1 (MQ=255)
                                                                                                                                   ggCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTCGTCAGCTTTAATCTGCGCGCGTGGTGGATATTTTTTCCGGCTCTCCATCTACGCGTGCATTTCGTTCGGTAGCGGTaca             >  1:363824/1‑143 (MQ=255)
                                                                                                                                    gCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTATTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCGGTacac            >  2:379822/1‑143 (MQ=255)
                                                                                                                                      tGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGAGAGATCGCGATAGTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCGGTACAccc          >  1:292430/1‑143 (MQ=255)
                                                                                                                                            agATGCGTCAGCATCGCATCCGGCAAAGGAAGATCTCAACGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCGGTACACCCATCGGa    >  1:54248‑M2/3‑143 (MQ=255)
                                                                                                                                              aTGCGTCAGCATCGCATCCGGCAAAGGCGGCTCTCAGCCATAGCGCCGGCTTAGTCAGGTTTAATCTGGGGGCGAGGTGGATATTTTGTCAGGACCTCCATATGCGCGTGCGTTGCGGTCGGTAGCGGGCCACGCACCGGAat  >  1:345404/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                              
TATGCATGCGCATTTGCTGGTGGTGAGTAAGTAGAAATCGGCGGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCAAATTCAATAAATTGCAGCGTTCTGTAGGCTGGATAAGATGCGTCAGCATCGCATCCGGCAAAGGCAGATCTCAGCGATAGCGCCGGCTTAGTCAGATTTAATCTGCGCGCGTGGTGGATATTTTTTCAGGATCTCCATATACGCGTGCATTTCGGTCTGTAGCGGTACACCCATCGGAAT  >  NC_000913/3984160‑3984444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.