New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2006970 =55 (0.330)142 (0.870) 106/198 0.3 74.5% coding (261/1659 nt) fliF flagellar basal‑body MS‑ring and collar protein
?CP009273 = 2007005 43 (0.260)coding (296/1659 nt) fliF flagellar basal‑body MS‑ring and collar protein

Only 100 of 145 total aligned reads displayed.

TGATACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2007070‑2006970
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTTGCGTCAGTT  <  CP009273/2007005‑2006906
                                                                                                                                                                                                         
TGATACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCT                                                                                                      >  2:1436429/1‑101
 GATACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTT                                                                                                     <  2:1334932/101‑1
  ATACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTG                                                                                                    <  1:1291393/101‑1
   TACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGT                                                                                                   <  1:2316174/101‑1
     CCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGC                                                                                                 <  1:1631574/101‑1
       AAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCA                                                                                               <  2:3942541/101‑1
         ACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGG                                                                                             >  1:1783469/1‑101
         ACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGG                                                                                             <  1:3926140/101‑1
         ACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGG                                                                                             >  2:2088271/1‑101
         ACTTTTCCTGATCAAGCAGTTCGAAACCGACCCCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGG                                                                                             >  2:3361260/1‑101
          CTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGC                                                                                            >  1:949443/1‑101
            TTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGC                                                                                          >  2:1851585/1‑101
             TTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCA                                                                                         >  1:2634848/1‑101
              TCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAG                                                                                        <  1:3385214/101‑1
               CCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGA                                                                                       <  1:63218/101‑1
               CCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGA                                                                                       >  2:1244625/1‑101
                 TGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACG                                                                                     >  1:3073319/1‑101
                   ATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCA                                                                                   >  2:232677/1‑101
                   ATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCA                                                                                   <  1:355840/101‑1
                     CAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGT                                                                                 >  2:1612754/1‑101
                     CAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGT                                                                                 <  1:2704962/101‑1
                      AAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTT                                                                                <  1:3455728/101‑1
                      AAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTT                                                                                <  2:2385594/101‑1
                       AGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTC                                                                               <  2:2078468/101‑1
                       AGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTC                                                                               <  2:3566510/101‑1
                          AGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTG                                                                            <  2:2613063/101‑1
                           GTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGA                                                                           >  1:48500/1‑101
                               GAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTT                                                                       >  1:3430202/1‑101
                               GAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTT                                                                       <  2:3226020/101‑1
                               GAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTT                                                                       >  1:1702749/1‑101
                                AAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTT                                                                      >  2:1151083/1‑101
                                AAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTT                                                                      >  1:1171209/1‑101
                                 AACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTA                                                                     >  2:3819419/1‑101
                                 AACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTA                                                                     <  2:2131986/101‑1
                                 AACCGACCGCGCCGCCTTTTGGCAAACCTTGATGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTA                                                                     >  1:1106254/1‑101
                                   CCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATC                                                                   >  1:2421913/1‑101
                                     GACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTG                                                                 <  1:3361260/101‑1
                                      ACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGC                                                                >  2:2686453/1‑101
                                       CCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCC                                                               >  1:1311966/1‑101
                                        CGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCG                                                              >  2:757923/1‑101
                                         GCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGG                                                             >  1:50657/1‑101
                                           GCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAA                                                           >  1:191435/1‑101
                                             CGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACT                                                         <  1:1510224/101‑1
                                              GCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTT                                                        <  1:1476887/101‑1
                                              GCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTT                                                        >  1:706218/1‑101
                                               CCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTC                                                       >  1:2098813/1‑101
                                                CTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCA                                                      <  2:667698/101‑1
                                                 TTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAA                                                     <  2:1458400/101‑1
                                                   TTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATA                                                   >  2:2811332/1‑101
                                                   TTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATA                                                   <  1:3092285/101‑1
                                                     GGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGC                                                 <  2:1839725/101‑1
                                                      GCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAATGTTATCTGCCGTAACTTCAATAGCG                                                >  2:8877/1‑101
                                                      GCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCG                                                <  2:2843489/101‑1
                                                      GCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCG                                                <  2:3136083/101‑1
                                                       CAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGC                                               >  1:3840398/1‑101
                                                         AACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCG                                             <  2:2548478/101‑1
                                                          ACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGC                                            >  2:2035319/1‑101
                                                          ACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGC                                            <  2:1850311/101‑1
                                                           CCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCT                                           <  2:3479062/101‑1
                                                           CCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCT                                           <  1:3831357/101‑1
                                                           CCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCT                                           >  1:3285693/1‑101
                                                           CCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCT                                           <  1:2584828/101‑1
                                                            CTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTG                                          <  2:3088659/101‑1
                                                            CTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTG                                          <  1:2523778/101‑1
                                                              TGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGC                                        >  1:3039281/1‑101
                                                              TGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGC                                        <  1:532404/101‑1
                                                               GTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCT                                       <  1:2204515/101‑1
                                                                 TGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTC                                     <  1:582336/101‑1
                                                                   TGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGC                                   >  1:722467/1‑101
                                                                    GCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCT                                  <  1:2522424/101‑1
                                                                    GCCAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCT                                  <  2:2716074/101‑1
                                                                      CAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGA                                <  1:854595/101‑1
                                                                      CAGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGA                                >  1:2495108/1‑101
                                                                       AGGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAA                               <  2:2226186/101‑1
                                                                        GGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAG                              <  2:3325090/101‑1
                                                                        GGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAG                              >  2:303662/1‑101
                                                                        GGCGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAG                              >  1:597582/1‑101
                                                                          CGCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCG                            >  1:2068150/1‑101
                                                                           GCAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGG                           <  1:3743882/101‑1
                                                                            CAGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGT                          >  1:485563/1‑101
                                                                             AGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTA                         >  1:109140/1‑101
                                                                             AGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTA                         <  2:596922/101‑1
                                                                             AGACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTA                         <  1:3206470/101‑1
                                                                               ACGCAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAG                       <  2:2972698/101‑1
                                                                                  CAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAA                    >  2:83539/1‑101
                                                                                  CAGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAA                    <  2:3410788/101‑1
                                                                                   AGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAAT                   <  2:2845735/101‑1
                                                                                   AGTTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAAT                   >  1:1982199/1‑101
                                                                                     TTCGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATAT                 >  1:1529583/1‑101
                                                                                       CGTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTC               <  2:1470506/101‑1
                                                                                        GTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCA              <  2:1171209/101‑1
                                                                                        GTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCA              >  2:3563549/1‑101
                                                                                        GTGAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCA              >  2:2008879/1‑101
                                                                                          GAACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATT            <  2:793628/101‑1
                                                                                           AACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTT           <  2:2305896/101‑1
                                                                                           AACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTT           >  1:3877692/1‑101
                                                                                           AACTTTATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGAGCCGCTGGCTTCGCTGAAGCGGTAAGGAAAATTCATTT           >  1:1960452/1‑101
                                                                                                 ATCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTTGCGTCA     >  2:2872817/1‑101
                                                                                                  TCTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTTGCGTCAG    >  2:1581309/1‑101
                                                                                                    TTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTTGCGTCAGTT  <  2:2781354/101‑1
                                                                                                                                                                                                         
TGATACCAAACTTTTCCTGATCAAGCAGTTCGAAACCGACCGCGCCGCCTTTTGGCAAACCTTGTTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/2007070‑2006970
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tTGTGCCAGGCGCAGACGCAGTTCGTGAACTTTATCTGCCGGAACTTCAATAGCGCCGCTGGCTTCGCTGAAGCGGTAAGGAATATTCATTTGCGTCAGTT  <  CP009273/2007005‑2006906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.