| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2006970 = | 55 (0.330) | 142 (0.870) | 106/198 | 0.3 | 74.5% | coding (261/1659 nt) | fliF | flagellar basal‑body MS‑ring and collar protein |
| ? | CP009273 | = 2007005 | 43 (0.260) | coding (296/1659 nt) | fliF | flagellar basal‑body MS‑ring and collar protein | |||||
Only 100 of 279 total aligned reads displayed.
CAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCG > CP009273/2006905‑2007105 | gaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGcaca < 1:582336‑M1/36‑1 (MQ=255) cTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAaga > 2:1581309‑M2/1‑98 (MQ=255) cagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAg < 1:2523778‑M1/41‑1 (MQ=255) agcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAgg < 1:2584828‑M1/42‑1 (MQ=255) agcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAgg > 2:1879890‑M1/60‑101 (MQ=255) aCGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataa > 2:3174076‑M2/1‑95 (MQ=255) gcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGt > 2:2035319‑M1/59‑101 (MQ=255) cggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGtt > 2:2682182‑M1/58‑101 (MQ=255) gcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTg > 1:3840398‑M1/56‑101 (MQ=255) aaaTGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagtt > 1:3877692‑M2/1‑91 (MQ=255) cgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGc < 2:3136083‑M1/47‑1 (MQ=255) cgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGc < 2:2843489‑M1/47‑1 (MQ=255) cgctattgaagttacggcagataacattcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGc > 2:8877‑M1/55‑101 (MQ=255) aaTGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttc < 2:793628‑M2/101‑12 (MQ=255) gctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGcc < 2:1839725‑M1/48‑1 (MQ=255) aTGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttca > 1:2105415‑M2/1‑89 (MQ=255) ctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCa < 1:152365‑M1/49‑1 (MQ=255) gAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacg < 2:1470506‑M2/101‑15 (MQ=255) ttgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCaaaa < 2:1458400‑M1/52‑1 (MQ=255) ttgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCaaaa > 1:2881522‑M1/50‑101 (MQ=255) atatTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaa > 1:1529583‑M2/1‑85 (MQ=255) atTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaact > 1:1982199‑M2/1‑83 (MQ=255) atTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaact < 2:2845735‑M2/101‑19 (MQ=255) ttCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactg < 2:3410788‑M2/101‑20 (MQ=255) aagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAggc > 1:706218‑M1/47‑101 (MQ=255) ccTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcg > 1:3428960‑M2/1‑80 (MQ=255) tACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtct < 2:596922‑M2/101‑25 (MQ=255) tACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtct < 1:3206470‑M2/101‑25 (MQ=255) cggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGcgcg > 2:1164076‑M1/41‑101 (MQ=255) ccGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgc < 1:3743882‑M2/101‑27 (MQ=255) cGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcg > 1:2068150‑M2/1‑74 (MQ=255) gCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgc < 2:674039‑M2/101‑29 (MQ=255) cagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggtc < 1:3361260‑M1/64‑1 (MQ=255) cTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcc > 2:303662‑M2/1‑72 (MQ=255) gataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggtcgg > 1:2421913‑M1/36‑101 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg > 1:3079565‑M2/1‑70 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg < 2:3348763‑M2/101‑32 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg < 1:854595‑M2/101‑32 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg > 1:2495108‑M2/1‑70 (MQ=255) taaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACATCAAGGTTTGCCAAAAGGCGGCGCGGTCGGtt > 1:1106254‑M1/34‑101 (MQ=255) aGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggc < 2:2716074‑M2/101‑34 (MQ=255) aagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTc > 1:3473708‑M1/32‑101 (MQ=255) aagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTc < 2:3226020‑M1/70‑1 (MQ=255) cGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcac > 1:1380671‑M2/1‑66 (MQ=255) tcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAAc > 2:183131‑M1/28‑101 (MQ=255) gaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCt < 2:3566510‑M1/78‑1 (MQ=255) aGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaagg < 2:3479062‑M2/101‑43 (MQ=255) gcggcgCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggt < 2:1850311‑M2/101‑44 (MQ=255) aactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCtt < 1:3455728‑M1/79‑1 (MQ=255) cggcgCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtt < 2:2548478‑M2/101‑45 (MQ=255) tgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGAt > 2:232677‑M1/20‑101 (MQ=255) tgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGAt < 1:355840‑M1/82‑1 (MQ=255) tgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGAt > 2:2100190‑M1/20‑101 (MQ=255) cgcTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgc < 2:572509‑M2/101‑48 (MQ=255) cgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCa > 1:3073319‑M1/18‑101 (MQ=255) tctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAgg > 2:1244625‑M1/16‑101 (MQ=255) tATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaa > 2:2811332‑M2/1‑51 (MQ=255) ctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGa < 2:2077720‑M1/87‑1 (MQ=255) tgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGaa > 1:2634848‑M1/14‑101 (MQ=255) aaGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggc < 1:1476887‑M2/101‑56 (MQ=255) ttCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggc < 1:403262‑M2/101‑59 (MQ=255) ttCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggc > 1:191435‑M2/1‑43 (MQ=255) tggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGttt < 2:3942541‑M1/94‑1 (MQ=255) tCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcg < 1:1654313‑M2/101‑60 (MQ=255) ccGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgc > 1:50657‑M2/1‑41 (MQ=255) acaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTa < 1:2316174‑M1/98‑1 (MQ=255) gCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggt > 2:2686453‑M2/1‑38 (MQ=255) aAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATc < 2:1334932‑M1/100‑1 (MQ=255) AGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCa > 1:596922‑M1/1‑101 (MQ=255) gATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAg > 2:3636486/1‑101 (MQ=255) tAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtt < 2:2131986‑M2/101‑69 (MQ=255) aaaGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggttt > 1:1171209‑M2/1‑32 (MQ=255) aaaGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCa > 1:1437171/1‑101 (MQ=255) aaGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttc > 1:1702749‑M2/1‑31 (MQ=255) tCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaac > 1:48500‑M2/1‑27 (MQ=255) cACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAg < 2:3066992/101‑1 (MQ=255) aCGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGc > 1:2757555/1‑101 (MQ=255) gAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgct < 2:2078468‑M2/101‑79 (MQ=255) aaCTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgctt < 2:2385594‑M2/101‑80 (MQ=255) aaCTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgctt > 2:228719‑M2/1‑22 (MQ=255) aCTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAAc < 1:193749/101‑1 (MQ=255) cTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttga < 2:2775000‑M2/101‑82 (MQ=255) gCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAgg < 1:1839725/101‑1 (MQ=255) gTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcag > 2:3758568‑M2/1‑16 (MQ=255) gTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcag > 1:520232‑M2/1‑16 (MQ=255) tCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcagg < 1:63218‑M2/101‑87 (MQ=255) cTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcagga < 1:3385214‑M2/101‑88 (MQ=255) cTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGaa < 1:266291/101‑1 (MQ=255) tGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAAt > 2:1445772/1‑101 (MQ=255) gcgcCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAAtt > 2:1674705/1‑101 (MQ=255) cgcCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTa < 1:3823817/101‑1 (MQ=255) gcCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcaggaaaag > 1:949443‑M2/1‑10 (MQ=255) gcCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTAt > 2:2930502/1‑101 (MQ=255) ccTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcaggaaaagt < 1:3926140‑M2/101‑93 (MQ=255) tGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAg > 1:322249/1‑101 (MQ=255) gCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcaggaaaagtttgg < 1:1631574‑M2/101‑97 (MQ=255) acaacaAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCggn < 1:2972698/101‑2 (MQ=255) caagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtcggtttcgaactgcttgatcaggaaaagtttggtat < 1:1291393‑M2/101‑100 (MQ=255) caacaaGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGgc > 1:722632/1‑101 (MQ=255) aacaaGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGgcg > 1:1089053/1‑101 (MQ=255) | CAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCAGCCAGTTCAGCGAACAGGTGAATTATCAGCGGGCG > CP009273/2006905‑2007105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |