| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2006970 = | 55 (0.330) | 142 (0.870) | 106/198 | 0.3 | 74.5% | coding (261/1659 nt) | fliF | flagellar basal‑body MS‑ring and collar protein |
| ? | CP009273 | = 2007005 | 43 (0.260) | coding (296/1659 nt) | fliF | flagellar basal‑body MS‑ring and collar protein | |||||
Only 100 of 297 total aligned reads displayed.
ATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCA > CP009273/2006870‑2007070 | aactgacgcaaatgaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaa < 2:2781354‑M1/1‑1 (MQ=255) cTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGa > 2:3079565/1‑101 (MQ=255) tttCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGAt < 1:3385390/101‑1 (MQ=255) tttCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGAt < 1:465563/101‑1 (MQ=255) tttCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGAt > 2:51237/1‑101 (MQ=255) tgacgcaaatgaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGAt > 2:2872817‑M1/98‑101 (MQ=255) ttCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATa < 1:3823290/101‑1 (MQ=255) tCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATaa > 1:1391122/1‑101 (MQ=255) gATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGt > 1:3687235/1‑101 (MQ=255) gATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGt < 2:3265598/101‑1 (MQ=255) gATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGt > 2:1635902/1‑101 (MQ=255) caaatgaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGt > 2:24048‑M1/93‑101 (MQ=255) aaatgaattttccttaccgcttcagcgaagccagcggctctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGtt > 1:1960452‑M1/92‑101 (MQ=255) aatgaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTc < 2:793628‑M1/11‑1 (MQ=255) tgaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCAc > 2:3563549‑M1/89‑101 (MQ=255) aGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCAc > 2:1106254/1‑101 (MQ=255) aGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCAc > 2:3387825/1‑101 (MQ=255) ggATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACg > 2:1953001/1‑101 (MQ=255) ggATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACg < 2:3593607/101‑1 (MQ=255) gaatattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACg < 2:1470506‑M1/14‑1 (MQ=255) atattccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGaa > 1:1529583‑M1/86‑101 (MQ=255) tggtggCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAAc < 2:3937269/101‑1 (MQ=255) ggtggCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACt < 1:2774689/101‑1 (MQ=255) attccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACt > 1:2521635‑M1/84‑101 (MQ=255) ccttaccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCg > 1:3428960‑M1/81‑101 (MQ=255) taccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCt > 2:1246718‑M1/78‑101 (MQ=255) taccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCt > 1:109140‑M1/78‑101 (MQ=255) taccgcttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCt < 1:3206470‑M1/24‑1 (MQ=255) aaTTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTgc < 2:835477/101‑1 (MQ=255) cttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGcc > 1:597582‑M1/73‑101 (MQ=255) ttcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCt < 1:3817962‑M1/30‑1 (MQ=255) gTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCt < 2:3848114/101‑1 (MQ=255) tcagcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTg < 2:3348763‑M1/31‑1 (MQ=255) agcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGc < 2:1547194‑M1/33‑1 (MQ=255) gcgaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGca > 1:722467‑M1/68‑101 (MQ=255) gaagccagcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGcaca < 1:582336‑M1/36‑1 (MQ=255) cTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAaga > 2:1581309‑M2/1‑98 (MQ=255) tGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagat > 1:2592605‑M2/1‑97 (MQ=255) tGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagat > 2:144616‑M2/1‑97 (MQ=255) agcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAgg < 1:2584828‑M1/42‑1 (MQ=255) agcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAgg > 1:3285693‑M1/60‑101 (MQ=255) agcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAgg > 2:1879890‑M1/60‑101 (MQ=255) aCGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataa > 2:3174076‑M2/1‑95 (MQ=255) aCGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataa < 2:817675‑M2/101‑7 (MQ=255) gcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGt < 2:1850311‑M1/43‑1 (MQ=255) gcggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGt > 2:2035319‑M1/59‑101 (MQ=255) cggcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGtt < 2:2548478‑M1/44‑1 (MQ=255) cAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagt < 2:3459099‑M2/101‑10 (MQ=255) gcgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTg > 1:3840398‑M1/56‑101 (MQ=255) aaaTGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagtt < 2:2305896‑M2/101‑11 (MQ=255) cgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGc < 2:3136083‑M1/47‑1 (MQ=255) cgctattgaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGc < 2:2843489‑M1/47‑1 (MQ=255) aTGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttca > 1:2105415‑M2/1‑89 (MQ=255) tGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcac < 2:1171209‑M2/101‑14 (MQ=255) gaagttccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAgg > 1:2098813‑M1/48‑101 (MQ=255) atTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaact > 1:1982199‑M2/1‑83 (MQ=255) atTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaact < 2:2845735‑M2/101‑19 (MQ=255) ttCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactg < 2:3410788‑M2/101‑20 (MQ=255) cTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgt < 2:2972698‑M2/101‑23 (MQ=255) tccggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGgcggcg < 1:1654313‑M1/59‑1 (MQ=255) tACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtct < 2:596922‑M2/101‑25 (MQ=255) cggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGcgcg > 2:1164076‑M1/41‑101 (MQ=255) cggcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGcgcg > 2:757923‑M1/41‑101 (MQ=255) aCCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctg > 1:485563‑M2/1‑76 (MQ=255) gcagataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggt > 2:2686453‑M1/39‑101 (MQ=255) gCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgc < 1:1248408‑M2/101‑29 (MQ=255) ttCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcct < 2:2226186‑M2/101‑31 (MQ=255) gataaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGcggtcgg > 1:2421913‑M1/36‑101 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg < 1:854595‑M2/101‑32 (MQ=255) tCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctg > 1:3079565‑M2/1‑70 (MQ=255) taaagttcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACATCAAGGTTTGCCAAAAGGCGGCGCGGTCGGtt > 1:1106254‑M1/34‑101 (MQ=255) cAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctgg < 1:3857854‑M2/101‑33 (MQ=255) aGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggc < 2:2716074‑M2/101‑34 (MQ=255) aGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggc < 1:2522424‑M2/101‑34 (MQ=255) tcacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAAc > 2:183131‑M1/28‑101 (MQ=255) gCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaaca > 1:3039281‑M2/1‑62 (MQ=255) cacgaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACt < 2:2613063‑M1/75‑1 (MQ=255) cAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaag > 1:817805‑M2/1‑60 (MQ=255) gaactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCt < 2:2078468‑M1/78‑1 (MQ=255) aactgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCtt < 1:3455728‑M1/79‑1 (MQ=255) tgcgtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGAt > 2:2100190‑M1/20‑101 (MQ=255) cgcTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgc < 2:572509‑M2/101‑48 (MQ=255) cgcTATTGAAGTTACGGCAGATAACATTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgc > 2:8877‑M2/1‑54 (MQ=255) gtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAg > 1:520232‑M1/17‑101 (MQ=255) gtctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAg > 2:3758568‑M1/17‑101 (MQ=255) tctgcgcctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAgg > 2:3039819‑M1/16‑101 (MQ=255) tATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaa > 2:2811332‑M2/1‑51 (MQ=255) ttGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaa > 1:2881522‑M2/1‑49 (MQ=255) tGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaag < 2:667698‑M2/101‑54 (MQ=255) aaGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggc < 1:1476887‑M2/101‑56 (MQ=255) cctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGt < 1:3926140‑M1/92‑1 (MQ=255) cctggcacaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGt > 1:1783469‑M1/10‑101 (MQ=255) aGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcg < 1:1510224‑M2/101‑57 (MQ=255) ttCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggc < 1:2024986‑M2/101‑59 (MQ=255) ttCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggc > 1:191435‑M2/1‑43 (MQ=255) ggCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcgg > 1:1311966‑M2/1‑39 (MQ=255) acaAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTa < 1:2316174‑M1/98‑1 (MQ=255) caAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTAt > 1:652734‑M1/3‑101 (MQ=255) cAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAagataaagttcacgaactgcgtctgcgcctggcacaacaaggtttgccaaaaggcggcgcggtc < 1:3361260‑M2/101‑65 (MQ=255) aAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATc < 2:1334932‑M1/100‑1 (MQ=255) | ATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAGCGAAGCCAGCGGCGCTATTGAAGTTCCGGCAGATAAAGTTCACGAACTGCGTCTGCGCCTGGCACAACAAGGTTTGCCAAAAGGCGGCGCGGTCGGTTTCGAACTGCTTGATCAGGAAAAGTTTGGTATCA > CP009273/2006870‑2007070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |