New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3213605	23 (1.330)	4 (0.250)	3/284	NT	14.4%	coding (753/1380 nt)	patA	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent
	?	CP009273	= 3213757	26 (1.610)					coding (905/1380 nt)	patA	putrescine:2‑oxoglutaric acid aminotransferase, PLP‑dependent

CCGCAAACCGTTTATGCCGTTACTGCCGGGCTTCCGTCATGTGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3213440‑3213605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgccgAGCGCTTTGGCAAGGCAGAGGATATCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCATCAGT  <  CP009273/3213757‑3213650                                                                                                                                                                                                                                                                                    aagggagggggTTATGCCGTTTCGGCCGGGGTTGCGTCATGGGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGAGCGCTTTGGCAAGGCAGAGGATAGCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCATCAGT  <  2:45045/263‑1                     TACTGCCGGGCTTCCGTCATGTGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGAGCGCTTTGGCAAGGCAGAGGATATCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCAT      >  1:45046/1‑250                                                                                                                               ACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGAGCGCTTTGGCAAGGCAGAGGATATCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCAT      >  2:80753/1‑144                                                                                                                                   ATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCGAGCGCTTTGGCAAGGCAGAGGATATCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCATCAGT  <  1:80755/144‑1                                                                                                                                                                                                                                                                                    CCGCAAACCGTTTATGCCGTTACTGCCGGGCTTCCGTCATGTGCCGTTTGGCAATATCGAAGCCATGCGCACGGCTCTTAACGAGTGCAAAAAAACCGGTGATGATGTGGCTGCGGTGATCCTCGAACCGATTCAGGGTGAAGGTGGCGTAATTCTGCCGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3213440‑3213605 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccgccgAGCGCTTTGGCAAGGCAGAGGATATCCGGCTGTACGTTCTCATGCTCGCAGGCGAACATCTTGCCCGTGCGCCCCATGCCCGTTTGTACTTCATCGAGGATCATCAGT  <  CP009273/3213757‑3213650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.