New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3965635 =	20 (1.160)	4 (0.250)	3/286	NT	17.9%	coding (1016/1263 nt)	wecC	UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase
	?	CP009273	3965743 =	18 (1.110)					coding (1124/1263 nt)	wecC	UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase

GCATCACCAGCACGTCTGCCGTTGCCAGCGCCTCGTCAAGCTGCGCCAGAGTACAAAGCCCGGTCAGTTTTTTCGGCAACTGGTGGATGTTAGGCTCAACAACCAGAGTTTCGCCGCTATGCCACTGGGCGATCAGTTCAGCGATTTCCATCGCCGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3965796‑3965635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggctttGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGT  >  CP009273/3965743‑3965785                                                                                                                                                                                                               GCATCACCAGCACGTCTGCCGTTGCCAGCGCCTCGTCAAGCTGCGCCAGAGTACAAAGCCCGGTCAGTTTTTTCGGCAACTGGTGGATGTTAGGCTCAACAACCAGAGTTTCGCCGCTATGCCACTGGGCGATCAGTTCAGCGATTTCCATCGCCG                                                   <  1:79360/156‑1                                                                          CGGCAACTGGTGGATGTTAGGCTCAACAACCAGAGTTTCGCCGCTATGCCACTGGGCGATTAGTTCAGCGATTTCCATCGCCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAG      >  1:113833/1‑128                                                                              AACTGGTGGATGTTAGGCTCAACAACCAGAGTTTCGCCGCTATGCCACTGGGCGATTAGTTCAGCGATTTCCATCGCCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGT  <  2:113831/128‑1                                                                                                                               GGGCGATCAGTTCAGCGATTTCCATCGCCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAG      >  1:181808/1‑75                                                                                                                                   GATCAGTTCAGCGATTTCCATCGCCGGGCTTTGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGT  <  2:181804/75‑1                                                                                                                                                                                                               GCATCACCAGCACGTCTGCCGTTGCCAGCGCCTCGTCAAGCTGCGCCAGAGTACAAAGCCCGGTCAGTTTTTTCGGCAACTGGTGGATGTTAGGCTCAACAACCAGAGTTTCGCCGCTATGCCACTGGGCGATCAGTTCAGCGATTTCCATCGCCGGGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/3965796‑3965635 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggctttGTACTCTGGCGCAGCTTGACGAGGCGCTGGCAACGGCAGACGT  >  CP009273/3965743‑3965785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.