New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4514953 =	63 (2.280)	4 (0.150)	4/266	NT	6.4%	coding (668/789 nt)	yjhI	putative DNA‑binding transcriptional regulator
	?	CP009273	4515239 =	55 (2.050)					coding (382/789 nt)	yjhI	putative DNA‑binding transcriptional regulator

CGCAATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4515122‑4514953 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGC  >  CP009273/4515239‑4515342                                                                                                                                                                                                                                                                                    CGCAATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGAAAAACAAGTACACCTTTCAGC  >  2:236215/1‑274     ATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCAC          <  1:236217/262‑1                                                                                             TGGGGCGGTATGTTGAAGTATGCAGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGAT                                                          >  1:380915/1‑126                                                                                                 tCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCTATCCAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGAT                                                      <  2:380909/125‑1                                                                                                                     GGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGA                                                                                                             <  2:234219/51‑1                                                                                                                                                                                                                                                                                    CGCAATACATTTACCGATAAAAAATTGTTTCTGGAAGAATTACAAAAAACACGCCTTCGGGGATGGGCCATAGACAACGAAGAATCAACCTATGGGGCGGTATGTTTAAGTATGCCGGTATTCAATATGTATAACAGAGTTAACTATGCAATCTCACTTTCTGGCGATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4515122‑4514953 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccAGCTTTTGCTCGTCGGTACAGAGTCCGGACTTTCGATCTTGTCGAGATAGATAGCCGAAATGCTCTCCATCGCCCCAAGATGACAAACCAGTCCACTTTTCAGC  >  CP009273/4515239‑4515342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.