New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4514953 =	63 (2.280)	4 (0.150)	4/266	NT	6.4%	coding (668/789 nt)	yjhI	putative DNA‑binding transcriptional regulator
	?	CP009273	4515239 =	55 (2.050)					coding (382/789 nt)	yjhI	putative DNA‑binding transcriptional regulator

GTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAAT  >  CP009273/4514711‑4515192                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                ttaaaaaaattttttCATCCGGAAGTAGGCACCTTCCCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                                                                                 <  2:466960/266‑1 (MQ=255) gTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                                                                                     >  1:237355/1‑271 (MQ=255)     aCCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                                                                                 <  2:237353/271‑1 (MQ=255)        tcTTTATTAATCATGAAGTCGGTAACTTCTCGCATTGCCTTTTTATCAATGATTCCGTCACGATTAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCNGTTTCCTTTTTTTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTtat                                                                                                                                                                                                          <  1:512929/274‑1 (MQ=255)                 aTCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAAAAAGTGAGATTGCCTAGTTAACTCTGTAAAACattacga                                                                                                                                                                                                 >  2:73346/1‑270 (MQ=255)                        aGTAGGCAACTTCGCGCATTGACTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCgg                                                                                                                                                                                          <  1:150290/275‑1 (MQ=255)                                      cgcATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCg                                                                                                                                                                                                                                            >  2:298711/1‑211 (MQ=255)                                          ttGCCTTTTTATCAAGGGTTCCGTCACGATGAATCGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAg                                                                                                                                                                                                                                        <  1:298715/211‑1 (MQ=255)                                           tGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGACTAATGCCGCTGAATTTTTTCATTACCTCAGTTTACTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGATCAATTCCCGCGAGATGTATCTCTTATTTCCTGAATAAATTACCGGATCGCAAGAAAGTGAGATGGCa                                                                                                                                                                                                                          >  2:142283/1‑224 (MQ=255)                                               tttttATCAAGGGTTCCGTCTCGATGAAACGTGCTTGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTTCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGACTAAACTCCCGGATCGCCAGGAAGTGAGATTGCATAGt                                                                                                                                                                                                                      <  1:142284/224‑1 (MQ=255)                                                             tCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCg                                                                                                                                                     <  1:73346/275‑1 (MQ=255)                                                                                           tGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCg                                                                                                                                                                                                                                                 >  2:564792/1‑153 (MQ=255)                                                                                             gAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                                                                                       >  1:167949/1‑177 (MQ=255)                                                                                             gAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTtata                                                                                                                                                                                                         >  1:130948/1‑191 (MQ=255)                                                                                               ataatGCCGCTGCATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATc                                                                                                                                                                                                                                             <  1:564800/153‑1 (MQ=255)                                                                                               ataatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCg                                                                                                                                                                                                                                                 >  2:480944/1‑149 (MQ=255)                                                                                                 aatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                                                                                   <  2:167948/177‑1 (MQ=255)                                                                                                 aatGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACata                                                                                                                                                                                                     <  2:130947/191‑1 (MQ=255)                                                                                                   tGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATc                                                                                                                                                                                                                                             <  1:480951/149‑1 (MQ=255)                                                                                                        cTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGAtt                                                                                                                                                                                                                             >  1:109922/1‑160 (MQ=255)                                                                                                        cTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTg                                                                                                                                                  >  1:168738/1‑235 (MQ=255)                                                                                                            aTTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCAt                                                                                                                                                                                                                         <  2:109922/160‑1 (MQ=255)                                                                                                            aTTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTa                                                                                                                                              <  2:168737/235‑1 (MQ=255)                                                                                                                     ttACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                                                                                       >  2:463421/1‑153 (MQ=255)                                                                                                                         cTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                                                                                   <  1:463428/153‑1 (MQ=255)                                                                                                                            aGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTG‑TATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCAACCCCGAAGGCGTGTTTTTTGTAATTATTCCATAAACAATTTTTTATCgg                                                                                     >  1:341854/1‑275 (MQ=255)                                                                                                                                           gctgaaaggtgtacttgtttttcatcttggggcgatggagagcatttcggctatctatctcgacaagatcgaaagtccggactctgtaccgacgagcaaaagctGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTgcg                                                                        >  2:236215‑M1/105‑274 (MQ=255)                                                                                                                                                   gtggactggtttgtcatcttggggcgatggagagcatttcggctatctatctcgacaagatcgaaagtccggactctgtaccgacgagcaaaagctGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTAt                                                                            <  1:236217‑M1/166‑1 (MQ=255)                                                                                                                                                             tGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCgg                                                                                                                                                                                          <  1:286972/142‑1 (MQ=255)                                                                                                                                                                       cccATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTg                                                                                                                                                                                                              >  2:230393/1‑112 (MQ=255)                                                                                                                                                                       cccATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTCAACATACCGCCCCATAGTTGGATTCTTCGTTGCCTATGTCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTGACGAAACAATTTGTTATCGGTAAATGTATTGCGCGGTTGTGTATTTAGCTTGAGTACTtata                                           >  2:404138/1‑275 (MQ=255)                                                                                                                                                                         cATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGc                                                                                                                                                                        >  1:196746/1‑148 (MQ=255)                                                                                                                                                                           tttGATATTTGTTTCGAGCATTTANGGGGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTG‑TATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTaaaaaa                                      <  2:341849/273‑1 (MQ=255)                                                                                                                                                                           tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                                                                                       >  1:172926/1‑99 (MQ=255)                                                                                                                                                                           tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                                                                                     >  1:482587/1‑101 (MQ=255)                                                                                                                                                                           tatGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTtat                                                                                                                                                                                                          <  1:230395/112‑1 (MQ=255)                                                                                                                                                                             tGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCa                                                                                                                                                                    <  2:196744/148‑1 (MQ=255)                                                                                                                                                                               atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                                                                                   <  2:172925/99‑1 (MQ=255)                                                                                                                                                                               atatTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                                                                                 <  2:482580/101‑1 (MQ=255)                                                                                                                                                                                tatTTGCTCAGCGCATTTCCGGAGCAATTCCAGAGAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                                                                                     >  1:373651/1‑96 (MQ=255)                                                                                                                                                                                    tGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                                                                                 <  2:373646/96‑1 (MQ=255)                                                                                                                                                                                     gCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGTCCCATAGGTTGATTCTTCGTTGTCTATGACACATCCCCGAAGGCCTGTTTTTTGTAATTCTTCCAGCAACAAttttttc                                                                                         >  2:135794/1‑214 (MQ=255)                                                                                                                                                                                     gCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATc                                                                                                                                     >  2:245422/1‑171 (MQ=255)                                                                                                                                                                                     gCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTa                                                                    >  2:167683/1‑236 (MQ=255)                                                                                                                                                                                         aGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCg                                                                                                                                 <  1:245424/171‑1 (MQ=255)                                                                                                                                                                                         aGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAAttt                                                                                             >  2:114555/1‑207 (MQ=255)                                                                                                                                                                                         aGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCgg                                                                                     <  1:135795/215‑1 (MQ=255)                                                                                                                                                                                         aGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAtgtg                                                                <  1:167684/236‑1 (MQ=255)                                                                                                                                                                                          gcgcATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGt                                                                                                                                                                                                                                   >  1:148211/1‑72 (MQ=255)                                                                                                                                                                                          gcgcATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATa                                                                                                                                                                                              >  2:408096/1‑109 (MQ=255)                                                                                                                                                                                          gcgcATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCACCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCACCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATAGGTAAATGTATTGAGCGTATTGGGAGTTAACGTGAGTGTTTCTAAAACATAATCCAggtaa                          >  2:185269/1‑269 (MQ=255)                                                                                                                                                                                             cATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTa                                                                                         <  1:114555/207‑1 (MQ=255)                                                                                                                                                                                              aTTTCCGGAGCAATTTCAGATAGCTGTCTATCTTATTTCCTGAATATACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCgg                                                                                                                                                                                          <  1:408103/109‑1 (MQ=255)                                                                                                                                                                                              aTTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTgaga                                                                                                                                                                                                                               <  2:148210/72‑1 (MQ=255)                                                                                                                                                                                               atctatctcgacaagatcgaaagtccggactctgtaccgacgagcaaaagctGGATAGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACcga                                                                                                                                                                        <  2:380909‑M1/74‑2 (MQ=255)                                                                                                                                                                                                   atctcgacaagatcgaaagtccggactctgtaccgacgagcaaaagctGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCTGCATACTTCAACATACCGCCCCa                                                                                                                                                                    >  1:380915‑M1/49‑126 (MQ=255)                                                                                                                                                                                                          aTTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGt                                                                                                                                                                                                                                   >  1:100543/1‑56 (MQ=255)                                                                                                                                                                                                          aTTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATAcc                                                                                                                                                                                            >  2:147404/1‑95 (MQ=255)                                                                                                                                                                                                              cAGATCGCTGTATATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGATATTTCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGTTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCtaata    <  1:185270/275‑1 (MQ=255)                                                                                                                                                                                                              cAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTgaga                                                                                                                                                                                                                               <  2:100543/56‑1 (MQ=255)                                                                                                                                                                                                              cAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCa                                                                                                                                                                                        <  1:147405/95‑1 (MQ=255)                                                                                                                                                                                                                gATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTACGCGTATGTGGAGTTCACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTTTCGTTTTTTctcggttattacg  >  2:18105/1‑263 (MQ=255)                                                                                                                                                                                                                    gCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTc              <  1:18105/259‑1 (MQ=255)                                                                                                                                                                                                                     cTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                                                                                       >  1:496494/1‑57 (MQ=255)                                                                                                                                                                                                                     cTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAg                                                                                                                                                                                                                       >  1:268828/1‑57 (MQ=255)                                                                                                                                                                                                                     cTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGtt                                                                                                                                                                                                                     >  2:101978/1‑59 (MQ=255)                                                                                                                                                                                                                     cTGTCTATCTTATTTCCTGAATAAACCACCGGATGGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGCAACAATTTTTTANCGGTAAATNTATTGcacg                                                                      >  1:380335/1‑202 (MQ=255)                                                                                                                                                                                                                         cTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTaa                                                                                                                                                                                                                   <  2:268826/57‑1 (MQ=255)                                                                                                                                                                                                                         cTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAAct                                                                                                                                                                                                                 <  1:101978/59‑1 (MQ=255)                                                                                                                                                                                                                               tATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTa                                                                    >  1:105418/1‑194 (MQ=255)                                                                                                                                                                                                                                   tCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTAtgtg                                                                <  2:105418/194‑1 (MQ=255)                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                GTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATCAAGGGTTCCGTCACGATGAAACGTGCTGGATACCGGTGGAATAATGCCGCTGAATTTTTTCATTACCTCAGTTTCCTTTTCGTAAGTGCTCATTTTCGTTTCTGTATCCCAGCCCATATGATATTTGCTCAGCGCATTTCCGGAGCAATTCCAGATAGCTGTCTATCTTATTTCCTGAATAAACTACCGGATCGCCAGAAAGTGAGATTGCATAGTTAACTCTGTTATACATATTGAATACCGGCATACTTAAACATACCGCCCCATAGGTTGATTCTTCGTTGTCTATGGCCCATCCCCGAAGGCGTGTTTTTTGTAATTCTTCCAGAAACAATTTTTTATCGGTAAATGTATTGCGCGTATGTGGAGTTAACGTGAGTGCTTCTAAAAAATAATCCAGTTCTTCTCGTGTCTTCCAGGCTAATAAT  >  CP009273/4514711‑4515192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.