New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3257426 =	40 (1.450)	4 (0.160)	4/252	NT	12.0%	coding (951/1332 nt)	tdcC	L‑threonine/L‑serine transporter
	?	CP009273	3257509 =	22 (0.870)					coding (868/1332 nt)	tdcC	L‑threonine/L‑serine transporter

AGCAGGGATGCGATAATCGGTGCGCCCATGGCTTCAATCAGGTCAAGGATGTTCGGGTTGGCGTAGGCAACAACCCAGGTGGAGCCCATGATGAAGATCATGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATCACCACTGCAACCATCAGCATGCTGGCACGAGAAATGATTTGGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACG  >  CP009273/3257175‑3257684                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                   tatcctgatcactgtctggctggggatttccatcatggttttctcctttaacttctcgcgaatcgtcgcttcctacgtggtttctaagcgtgaagagaatgagaaagacttcggtcgcgagttcaccgaacgtaaatgttcaaaaatcatttctcgtgccagcaacctgatggttgcagaggtgaggatcttcgcctgtagatgactgtttactctgtctacggccaacaggggggaagcgaaagcgcagaatattcaagtctntgcttaa                                                                                                                                                                                                                                                 <  2:46467‑M1/20‑11 (MQ=255)                                                   gTTCGGGTTGGCGTAGGCAACAACCCAGGTGGAGCCCATGATGAAGATCATGCTGATAGTGTTCAGTTTACCCAGCGACACTNTAGTTTTGNCGCCTTTATAACTAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCa                                                                                                                                                                                           <  1:381639/275‑1 (MQ=255)                                                                                             aagagtatgagaaagacttcggtcgcgacttcaccgaacgtaaatgttcccaaatcatttctcgtgccagcatgctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTc                                                                                                                                                                                                                                                               <  2:504742‑M1/6‑1 (MQ=255)                                                                                              aaGATCATGATGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCGTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGgag                                                                                                                                                 <  1:68306/274‑1 (MQ=255)                                                                                               aGATCATGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGCCCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTTAAGCTAGCCACAAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTTTTTTGTTACCGGTCATGGCAGCAAAGTGGTTAGc                                                                                                                                                                                                         >  2:90721/1‑217 (MQ=255)                                                                                                 gtatgagaaagacttcggtcgcgacttcaccgaacgtaaatgttcccaaatcatttctcgtgccagcatgctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAgt                                                                                                                                                                                                                                                           >  1:504749‑M1/156‑165 (MQ=255)                                                                                                   cATGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGa                                                                                                                                                                                                     <  1:90721/217‑1 (MQ=255)                                                                                                     tGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACgtt                                                                                                                                                                                                                                            >  2:261780/1‑176 (MQ=255)                                                                                                     tGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAg                                                                                                                                                                                                 >  1:272847/1‑219 (MQ=255)                                                                                                         gATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGttt                                                                                                                                                                                                                                        <  1:261782/176‑1 (MQ=255)                                                                                                         gATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAg                                                                                                                                                                                             <  2:272845/219‑1 (MQ=255)                                                                                                                ttCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTgg                                                                                                                                                                                                              >  1:326301/1‑195 (MQ=255)                                                                                                                    gTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAg                                                                                                                                                                                                          <  2:326296/195‑1 (MQ=255)                                                                                                                             gCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGaa                                                                                                                                                                                               >  2:77692/1‑197 (MQ=255)                                                                                                                                 cacTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCa                                                                                                                                                                                           <  1:77692/197‑1 (MQ=255)                                                                                                                                                 ccTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGa                                                                                                                                                                                                                                                 >  2:149854/1‑127 (MQ=255)                                                                                                                                                     tataACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACgt                                                                                                                                                                                                                                             <  1:149855/127‑1 (MQ=255)                                                                                                                                                     atttctcgtgccagcatgctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTa                                                                                                                                                                                                           <  2:541947‑M1/58‑1 (MQ=255)                                                                                                                                                         ctcgtgccagcatgctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCa                                                                                                                                                                                                       >  1:541955‑M1/100‑161 (MQ=255)                                                                                                                                                              aCTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAg                                                                                                                                                                                                 >  2:236809/1‑162 (MQ=255)                                                                                                                                                                  cAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAg                                                                                                                                                                                             <  1:236811/162‑1 (MQ=255)                                                                                                                                                                   catgctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaat                                                                                                                                                                                                                                                                   <  2:72618‑M1/2‑1 (MQ=255)                                                                                                                                                                       ctgatggttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTc                                                                                                                                                                                                                                                               >  1:72618‑M1/86‑91 (MQ=255)                                                                                                                                                                        cAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTa                                                                                                                                                                                                           >  1:153771/1‑142 (MQ=255)                                                                                                                                                                          ggCCATTCAGACCTTCCAGCGTTGCCAGAGAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGATTCCGNCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTaaa                                                                                                                           >  1:405523/1‑220 (MQ=255)                                                                                                                                                                          ggCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGa                                                                                                                                                                                                                                                 >  1:473728/1‑102 (MQ=255)                                                                                                                                                                          ggCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCa                                                                                                                                                                                                                            >  1:245804/1‑123 (MQ=255)                                                                                                                                                                          ggCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATCACCACTGCaa                                                                                                    >  1:2572/1‑243 (MQ=255)                                                                                                                                                                            ccATTCAGACCTTCCAGCGTGCCCAGACAGGGACCGAAGAAAGCTTTGAAGATAGCGACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTTGTTAGCCa                                                                                                                                                                                                       <  2:153770/142‑1 (MQ=255)                                                                                                                                                                             gttgcagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGcc                                                                                                                                                                                                        <  1:529469‑M1/61‑1 (MQ=255)                                                                                                                                                                              aTTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCa                                                                                                                                                                                                                                                                    <  1:56041/79‑1 (MQ=255)                                                                                                                                                                              aTTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACgt                                                                                                                                                                                                                                             <  2:473721/102‑1 (MQ=255)                                                                                                                                                                              aTTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGa                                                                                                                                                                                                                        <  2:245802/123‑1 (MQ=255)                                                                                                                                                                                 cagtggtgatgttctttgcctttagctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGAt                                                                                                                                                                                                    >  2:529461‑M1/76‑140 (MQ=255)                                                                                                                                                                                         ccAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGCAGAAACAGGAAGCTAATGGCAAAGAACATCACCACTGAAACAATCAGCATGCGGCCACGAGAAATGAATTGGGAACATTTaaattca                                                     >  2:532807/1‑269 (MQ=255)                                                                                                                                                                                               ttCCCAGATAGTGACAGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCACATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCtt                                                                                                                                                                         >  1:397337/1‑153 (MQ=255)                                                                                                                                                                                                tCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCt                                                                                                                                                                    >  2:456679/1‑157 (MQ=255)                                                                                                                                                                                                 cccAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAg                                                                                                                          >  2:111718/1‑198 (MQ=255)                                                                                                                                                                                                   cAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCACATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGc                                                                                                                                                                     <  2:397331/153‑1 (MQ=255)                                                                                                                                                                                                    aGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCg                                                                                                                                                                <  1:456686/157‑1 (MQ=255)                                                                                                                                                                                                     gATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCaa                                                                                                                      <  1:111718/198‑1 (MQ=255)                                                                                                                                                                                                        agctgcctgtttactctgtctccggccaacatggcggaagccaaagcgcagaATATTCCAgt                                                                                                                                                                                                                                                           <  1:441704‑M1/10‑1 (MQ=255)                                                                                                                                                                                                          tGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGt                                                                                                                                                                                                             >  2:121266/1‑106 (MQ=255)                                                                                                                                                                                                          tGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATc                                                                                                              >  2:493359/1‑201 (MQ=255)                                                                                                                                                                                                          tGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGAAGACAGAGTAAACAGGCAGNTAAAGGCAAAGAACATCACCAATGCAACCATCAGCATGCTGGCACGAGAAATGATTTGGGAACAATTACGTTAGGTGAAGTCGCGACCGa                                     >  1:429446/1‑274 (MQ=255)                                                                                                                                                                                                            aCCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATCACCACTGCAACCATCAGCATGCTGGCACGAGAAATGATTTGGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGt                                  >  1:46467/1‑275 (MQ=255)                                                                                                                                                                                                              cGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGc                                                                                                                                                                                                         <  1:121266/106‑1 (MQ=255)                                                                                                                                                                                                              cGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAATGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATcacca                                                                                                          <  1:493366/201‑1 (MQ=255)                                                                                                                                                                                                                                 aGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGtt                                                                                                                                                         >  2:381737/1‑135 (MQ=255)                                                                                                                                                                                                                                     aCGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGcc                                                                                                                                                     <  1:381743/135‑1 (MQ=255)                                                                                                                                                                                                                                              atgttgGAAGCCGCTTATTCCAGTTTAAACGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGCTAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGCTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATCACCACTGCAACCATCAGCATGCTGGCACGAGAAATGATTTGGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACg  <  1:532815/273‑1 (MQ=255)                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                   AGCAGGGATGCGATAATCGGTGCGCCCATGGCTTCAATCAGGTCAAGGATGTTCGGGTTGGCGTAGGCAACAACCCAGGTGGAGCCCATGATGAAGATCATGCTGATAGTGTTCAGTTTACCCAGCGACACTTTAGTTTTGTCGCCTTTATAACCAAACTTCAGGACCAGGCCATTCAGACCTTCCAGCGTTCCCAGATAGTGACCGAAGAAAGATTTGAAGATAGCCACGAGTGCGATGATGGAAGCCGCATATTCCAGTGTAATCGCGAACGTTGTTTTGGTACCGGTCATGGACGCAAAGTGGTTAGCCAGATAAGAAAGCACTGGAATATTCTGCGCTTTGGCTTCCGCCATGTTGGCCGGAGACAGAGTAAACAGGCAGCTAAAGGCAAAGAACATCACCACTGCAACCATCAGCATGCTGGCACGAGAAATGATTTGGGAACATTTACGTTCGGTGAAGTCGCGACCGAAGTCTTTCTCATACTCTTCACGCTTAGAAACCACG  >  CP009273/3257175‑3257684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.