New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 2193886 = | 19 (0.490) | 14 (0.380) | 6/300 | NT | 42.3% | coding (129/3633 nt) | yehI | DUF4132 domain‑containing protein |
? | CP009273 | 2193944 = | 20 (0.540) | coding (187/3633 nt) | yehI | DUF4132 domain‑containing protein |
TTCTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2193927‑2193886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAA > CP009273/2193944‑2194015 TTCTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGG‑‑‑‑ATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACA > 1:405464/1‑106 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACA > 1:588860/1‑108 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAAC > 2:114843/1‑107 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAT > 1:694174/1‑99 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAT > 2:409581/1‑99 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTT > 2:214055/1‑55 CTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTT > 2:508551/1‑55 TCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGG‑‑‑‑ATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAA < 2:405457/106‑1 TCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAA < 1:114844/107‑1 TCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGC < 1:409588/99‑1 TCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGC < 2:694165/99‑1 TCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCAC < 1:214059/55‑1 TCAGCTTTTTGTAGCAATTCATCACCCAATCTCTGGCGTTATGAGAATTTTTCAC < 1:508558/55‑1 TCAGCTTTGTGTAGCAATTCATCACCCAATGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAA < 2:588851/108‑1 TTCTTCTCAGCTTTTTGTAGCAATTCATCACCCAATGTCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2193927‑2193886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAA > CP009273/2193944‑2194015 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |