New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2193886 =	19 (0.490)	14 (0.380)	6/300	NT	42.3%	coding (129/3633 nt)	yehI	DUF4132 domain‑containing protein
	?	CP009273	2193944 =	20 (0.540)					coding (187/3633 nt)	yehI	DUF4132 domain‑containing protein

TGTGGCTATGGGAAGGCAAAGCAGAAAGATATGGCTGGGGGAGTAATTCAACACAGGAAGCGCAGTTCTCCGTAATCGATGCCATCACCGCCAGCGAGCTAATTAACGATATTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGC  >  CP009273/2193618‑2194154                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                             tgtgGCTATGGGAAGGCAAAGCAGAAAGATATGGCTGGGGGAGTAATTCAACACAGGAAGCGCAGTTCTCCGTAATCGATGCCATCACCGCCAGCGAGCTAATTAACGATATTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCGACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACa                                                                                                                                                                                                                                                                        >  1:404810/1‑275 (MQ=255)          ggcaaagacaaGCAGAAAGATATGGCGGGGGTAGTAATTCAACACAGGAAGCGCAGTTCTACGTAATCGATGCCATCACCGCCAGAAAGCTAATTAACGATATTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACAGTGGCTGGCGGATAACGCCGAACTGAAACTGAAATATAAAAAAGGCAAAACGCCGATCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGACGTCTCATCCAGACATTTGGtg                                                                                                                                                                                                                                                                 <  2:153480/264‑1 (MQ=255)                                                                                                                ttGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGAGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCAATCAACTTGAt                                                                                                                                                          >  1:697554/1‑274 (MQ=255)                                                                                                                 tGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGTAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGAGAGTCTCATACNGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGACAGTCCGCCATCACGAAGGCCATCAACTTAATc                                                                                                                                                         >  1:668534/1‑274 (MQ=255)                                                                                                                         tGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACCTGGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCGGGCGTTATGAGAATTTTTCAATGGAGTGGCAGTCCGCCACCCCGCAGGCCACCCAATTGATCGGcccaca                                                                                                                                                 >  2:689536/1‑269 (MQ=255)                                                                                                                            ttGAATAAGTAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCGTCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTCCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa                                                                                                                                              <  1:365432/274‑1 (MQ=255)                                                                                                                                          ctcagggACAAGGAAGTACCGGGACTGTCGGTTAACCCCCAACTGGACTTGAAATATAAAAAAGGCACACCGCCGCTCAGTCATCGTCGCGGGCCTGGGGGACCAGGGTCCGTTATCACTGGAAGTCTCATCCATACATTGGTTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc                                                                                                                               <  2:697545/270‑1 (MQ=255)                                                                                                                                               ggACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCACAATCCCGGCCCGGa                                                                                                                          >  1:298849/1‑275 (MQ=255)                                                                                                                                                                       ggATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGGCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcg                                                                                                  <  1:689545/275‑1 (MQ=255)                                                                                                                                                                                               atatAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCa                                                                                                                                                                             >  2:128061/1‑176 (MQ=255)                                                                                                                                                                                                   aaaaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa                                                                                                                                                                         <  1:128062/176‑1 (MQ=255)                                                                                                                                                                                                     tttgtgttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACACAAAGCTga                                                                                                                                                                                                                                           <  2:588851‑M1/36‑1 (MQ=255)                                                                                                                                                                                                     aaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATgag                                                                                                                                                                                                            >  1:59349/1‑139 (MQ=255)                                                                                                                                                                                                      ttgtgttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTga                                                                                                                                                                                                                                           <  1:114844‑M1/36‑1 (MQ=255)                                                                                                                                                                                                         tttgtgttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcatCCAGACATTGGGTGATGAATTGCTACAAAAAGCTgaga                                                                                                                                                                                                                                         <  2:405457‑M1/38‑1 (MQ=255)                                                                                                                                                                                                         tgttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  1:588860‑M1/69‑108 (MQ=255)                                                                                                                                                                                                         ggCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAAtt                                                                                                                                                                                                        <  2:59348/139‑1 (MQ=255)                                                                                                                                                                                                          gttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  2:114843‑M1/68‑107 (MQ=255)                                                                                                                                                                                                             tgttcgccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcatCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAgaagaa                                                                                                                                                                                                                                     >  1:405464‑M1/65‑106 (MQ=255)                                                                                                                                                                                                              gccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTga                                                                                                                                                                                                                                           <  2:694165‑M1/36‑1 (MQ=255)                                                                                                                                                                                                              gccgatcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTga                                                                                                                                                                                                                                           <  1:409588‑M1/36‑1 (MQ=255)                                                                                                                                                                                                                  atcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  1:694174‑M1/60‑99 (MQ=255)                                                                                                                                                                                                                  atcaagttgatggcctgcgtgatggcggactgccactccagtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  2:409581‑M1/60‑99 (MQ=255)                                                                                                                                                                                                                     agaaGTCTTCGGCGCTTGCCGGTCGATCCTGGTTCCGTTATCACGGGTATTCTCATCAATAATTTGGGTGATGAATTGCTAAAAAAAGCTGACAAAAAAAAAACCATTGTCGGTCGTTAGTAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTAAATCCCGGCCCGGACGATGGCGGCGCTAGCCTGTATCGCCCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAaga                                                    <  2:668525/272‑1 (MQ=255)                                                                                                                                                                                                                                    tGGCCGGGCGTACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACTCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGACGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGACCAACAAGAGGGGCTGGAATATGc                                     >  1:706249/1‑275 (MQ=255)                                                                                                                                                                                                                                                          gtgaaaaattctcataacgCCAGAGATTGGGTGATGAATTGCTACAAAAAGCTga                                                                                                                                                                                                                                           <  1:508558‑M1/36‑1 (MQ=255)                                                                                                                                                                                                                                                          gtgaaaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTga                                                                                                                                                                                                                                           <  1:214059‑M1/36‑1 (MQ=255)                                                                                                                                                                                                                                                              aaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  2:508551‑M1/16‑55 (MQ=255)                                                                                                                                                                                                                                                              aaaattctcataacgCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaag                                                                                                                                                                                                                                       >  2:214055‑M1/16‑55 (MQ=255)                                                                                                                                                                                                                                                                cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGCAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACCATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGAAGAAATAGTCCAACAAGCGGGGCTTGAATAGTCGCCCGCGGGTGAGGTTGCACGCCAgga          >  2:199607/1‑272 (MQ=255)                                                                                                                                                                                                                                                                cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGACAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCAACTGAGGTGGTGATTGCACGCCAGttt         >  1:188454/1‑275 (MQ=255)                                                                                                                                                                                                                                                                    aaGTCTCATCCAGACATTGGGTGATGAATTGCTAAAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACGGGAGTGGCAGACCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCa                  <  1:199610/262‑1 (MQ=255)                                                                                                                                                                                                                                                                       tctcCTCCAGACATTGGGTGTTTAATTGTTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAAAGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGACTGCACGCCAGTTTATTgcgc  <  1:338390/275‑1 (MQ=255)                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                             TGTGGCTATGGGAAGGCAAAGCAGAAAGATATGGCTGGGGGAGTAATTCAACACAGGAAGCGCAGTTCTCCGTAATCGATGCCATCACCGCCAGCGAGCTAATTAACGATATTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGC  >  CP009273/2193618‑2194154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.