| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2193886 = | 19 (0.490) | 14 (0.380) | 6/300 | NT | 42.3% | coding (129/3633 nt) | yehI | DUF4132 domain‑containing protein |
| ? | CP009273 | 2193944 = | 20 (0.540) | coding (187/3633 nt) | yehI | DUF4132 domain‑containing protein | |||||
TTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGATCCTCTGGTAGTGACATTGCA > CP009273/2193729‑2194191 | ttGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGAGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCAATCAACTTGAt > 1:697554/1‑274 (MQ=255) tGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGTAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGAGAGTCTCATACNGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGACAGTCCGCCATCACGAAGGCCATCAACTTAATc > 1:668534/1‑274 (MQ=255) tGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACCTGGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCGGGCGTTATGAGAATTTTTCAATGGAGTGGCAGTCCGCCACCCCGCAGGCCACCCAATTGATCGGcccaca > 2:689536/1‑269 (MQ=255) ttGAATAAGTAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCGTCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTCCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa < 1:365432/274‑1 (MQ=255) ctcagggACAAGGAAGTACCGGGACTGTCGGTTAACCCCCAACTGGACTTGAAATATAAAAAAGGCACACCGCCGCTCAGTCATCGTCGCGGGCCTGGGGGACCAGGGTCCGTTATCACTGGAAGTCTCATCCATACATTGGTTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc < 2:697545/270‑1 (MQ=255) ggACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCACAATCCCGGCCCGGa > 1:298849/1‑275 (MQ=255) ggATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGGCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcg < 1:689545/275‑1 (MQ=255) atatAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCa > 2:128061/1‑176 (MQ=255) aaaaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 1:128062/176‑1 (MQ=255) aaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATgag > 1:59349/1‑139 (MQ=255) ggCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAAtt < 2:59348/139‑1 (MQ=255) agaaGTCTTCGGCGCTTGCCGGTCGATCCTGGTTCCGTTATCACGGGTATTCTCATCAATAATTTGGGTGATGAATTGCTAAAAAAAGCTGACAAAAAAAAAACCATTGTCGGTCGTTAGTAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTAAATCCCGGCCCGGACGATGGCGGCGCTAGCCTGTATCGCCCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAaga < 2:668525/272‑1 (MQ=255) tGGCCGGGCGTACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACTCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGACGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGACCAACAAGAGGGGCTGGAATATGc > 1:706249/1‑275 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGCAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACCATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGAAGAAATAGTCCAACAAGCGGGGCTTGAATAGTCGCCCGCGGGTGAGGTTGCACGCCAgga > 2:199607/1‑272 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGACAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCAACTGAGGTGGTGATTGCACGCCAGttt > 1:188454/1‑275 (MQ=255) aaGTCTCATCCAGACATTGGGTGATGAATTGCTAAAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACGGGAGTGGCAGACCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCa < 1:199610/262‑1 (MQ=255) tctcCTCCAGACATTGGGTGTTTAATTGTTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAAAGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGACTGCACGCCAGTTTATTgcgc < 1:338390/275‑1 (MQ=255) gggTGATTAATTGCGACAAAAAGCTTAGAAGGAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGagag < 2:706239/273‑1 (MQ=255) ttcttctcagctttttgtagcaattcatcacccaatgtctgg‑‑‑‑ATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAaca > 1:405464‑M2/43‑106 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAAtttt > 2:214055‑M2/41‑55 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAAtttt > 2:508551‑M2/41‑55 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAt > 1:694174‑M2/41‑99 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAt > 2:409581‑M2/41‑99 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAaca > 1:588860‑M2/41‑108 (MQ=255) cttctcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAac > 2:114843‑M2/41‑107 (MQ=255) tctcagctttttgtagcaattcatcacccaatgtctgg‑‑‑‑ATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaaa < 2:405457‑M2/68‑1 (MQ=255) tcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCAc < 1:214059‑M2/19‑1 (MQ=255) tcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 2:694165‑M2/63‑1 (MQ=255) tcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 1:409588‑M2/63‑1 (MQ=255) tcagctttttgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa < 1:114844‑M2/71‑1 (MQ=255) tcagctttttgtagcaattcatcacccaatctctggCGTTATGAGAATTTTTCAc < 1:508558‑M2/19‑1 (MQ=255) tcagctttgtgtagcaattcatcacccaatgtctggCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaaa < 2:588851‑M2/72‑1 (MQ=255) aGCTGGGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATAACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCNGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGATCCTCTGGTAGTGACATTg < 1:662821/274‑1 (MQ=255) gcttaaaagaaAAAAAACATTGTCTGTCCTTATTAGAATTTTTCCCTGGAGTGCCAGTCCGCCATCACTCAGCCCATCAACTTGATCGGCGAACACAAACCCTCGAGCCCGGCCCGGACAGTGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGGCCATCAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGTTCCTCTGGTAGTGACATTGCa < 2:188451/269‑1 (MQ=255) | TTGAAGCCCTGTTTGAATAAGGAAAGAGCATGGACAAGGAATTACCGTGGCTGGCGGATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAAGAAAAAAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCGCAAAATGACAGCCAACAGTTGCTCGACGAAATCGTCCAACAAGAGGGGCTGGAATATGCGACTGAGGTGGTGATTGCACGCCAGTTTATTGCGCGGTGTTATGAGAGTGATCCTCTGGTAGTGACATTGCA > CP009273/2193729‑2194191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |