| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2209186 | 40 (1.040) | 16 (0.440) | 6/300 | NT | 33.3% | coding (51/108 nt) | yohO | putative membrane protein |
| ? | CP009273 | = 2209301 | 26 (0.710) | coding (655/732 nt) | yehW | inner membrane putative ABC superfamily transporter permease | |||||
AATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2209107‑2209186‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtta‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCATAAACAGGAACAGGGCGATGACCCCAA‑TTTTAGCTATGCGCATAATGCACTCCTTATGTTAACGAAAGGATTGTACAGTAAAGCGCATTTGTTAACGAATCATTAAATGCCGAGTGGGAAAATATCATGGCCTTGTTCTTGCCAACT < CP009273/2209301‑2209032 AATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 2:120970/1‑151AATCCTCTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 2:419981/1‑153 gtgTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCA < 2:179988/126‑1 CTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 1:419988/153‑1 CTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 1:120971/151‑1 GCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 2:107252/1‑127 ATAGCTATAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCT > 2:109486/1‑80 ATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 1:293392/1‑125 ATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCG‑TCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 2:255120/1‑115 ATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCG‑TCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAA > 1:113051/1‑115 AGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 1:107253/127‑1 CTATAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTT < 1:109487/80‑1 CTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 1:24663/125‑1 CTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCG‑TCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 2:113050/115‑1 CTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑GGCGGAATTGGTGGCG‑TCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 1:255125/115‑1 CTAAAATTGGGGTCAGCGCCCTGTTCCTGTTTATGGCGTTAGGCGGAATTGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATA < 2:293386/125‑1 CGTTA‑‑C‑‑‑‑‑TGGTGTCCCTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAACATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCCCCTAACGCCCTAAACAGGAACAGGGCGATAACCCCAA‑TTTTAGCTATGCGCCTAATGCACTCCTTACGTTAACGAAAG > 2:27601/1‑196 CGTTA‑‑C‑‑‑‑‑TGGTGGCACTTGCGGCGATCATCGCAGA‑CGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCATAAACAGGAACAGGGCGATGACCCCAATTTTTAGCTATGCGCATAATGCA < 1:322426/177‑1 CGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCATAAACAGGAACAGGGCGATGACCCCAA‑TTTTAGCTATGCGCATAATGCACTCCTTATGTTAACGAAAGGATTGTACAGTAAAGCGCATTTGTTAACGAATCATTAAATGCCGAGTGGGAAAATATCATGGCCTTGTTCTTGCCAAat > 1:354190/1‑273 CGTTA‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAAC > 2:226624/1‑124 A‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCA < 1:226629/124‑1 A‑‑C‑‑‑‑‑TGGGGGCACTGGCGGCGAGCATCGCAGACCGCCGGGTTGAAAGGCGGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCATAAACAGGAACAGGGCGATGACCCCAA‑TTTTAGCTATGCGCATAATGCACTCCTTATGTTAACGAAAGGATT < 1:27601/196‑1 AATCCTTTCGTTAACATAAGGAGTGCATTATGCGCATAGCTAAAATTGGGGTCATCGCCCTGTTCCTGTTTATGGCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/2209107‑2209186‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtta‑‑C‑‑‑‑‑TGGTGGCACTGGCGGCGATCATCGCAGACCGCCTGTTTGAAAGGCTGGTGCAGGCGCTTAGCCAGCACGCAAAATAAAGGTATAACCTGCGAGCATGACGCCACCAATTCCGCCTAACGCCATAAACAGGAACAGGGCGATGACCCCAA‑TTTTAGCTATGCGCATAATGCACTCCTTATGTTAACGAAAGGATTGTACAGTAAAGCGCATTTGTTAACGAATCATTAAATGCCGAGTGGGAAAATATCATGGCCTTGTTCTTGCCAACT < CP009273/2209301‑2209032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |