New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4527387 =	57 (1.480)	10 (0.270)	8/300	NT	15.4%	coding (25/981 nt)	nanS	9‑O‑acetyl N‑acetylneuraminic acid esterase
	?	CP009273	4527631 =	55 (1.500)					coding (952/1107 nt)	nanM	N‑acetylneuraminic acid mutarotase

ACTGATATTCATCTTTGGCATAACGGGAAATGGGATAAATCGGGTGAATTATCGCAAGGTCGGGCCTACGGAGTATCATTGCCCTGGAATAATAGTCTATTGATTATTGGCGGTGAAACTGCAGGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAACGCTTCAGGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4527667‑4527387 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAAT  >  CP009273/4527631‑4527758                                                                                                                                                                                                                                                                                                                                                                                                                               ACTGATATTCATCTTTGGCATAACGGGTAATGGGATAAATCGGGTGAATGATCGCAAGGTCGGGCCTACGGAGTATCATTGACCTGGAATAATAGTCTATTGATTATTGGCGGTGAAACTGCNGGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAACGCTTCAGGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGC                                                                                                                                            <  1:596722/275‑1                                                                                                      GATTATTGGCGGTGAAACTGCAGGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAACGCTTCAGGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGC                                                                                                                                            <  1:544440/174‑1                                                                                                                            GGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAACGCTTCAGGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGC                                                                                                                                            <  1:5661/152‑1                                                                                                                                                                                                        GGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTATTACTATGTTCTTACCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCT                                                                       >  1:104916/1‑145                                                                                                                                                                                                            CCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTATTACTATGTTCTTACCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCAT                                                                   <  2:104915/145‑1                                                                                                                                                                                                                        GCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCC                                                                                                                                           >  1:276523/1‑61                                                                                                                                                                                                                            TGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGAT                                                                                                                                       <  2:276518/61‑1                                                                                                                                                                                                                                      TTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGG                                                                          >  1:349710/1‑108                                                                                                                                                                                                                                      TTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATA                                                                                                  >  2:242048/1‑84                                                                                                                                                                                                                                        GTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACATTTGAATCCGGCCCCTCCGGC      >  1:687015/1‑174                                                                                                                                                                                                                                        GTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGA                                                                                                     >  1:241369/1‑79                                                                                                                                                                                                                                          CATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTT                                                                      <  2:349704/108‑1                                                                                                                                                                                                                                          CATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAG                                                                                              <  1:242053/84‑1                                                                                                                                                                                                                                            TTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAAT  <  2:687006/174‑1                                                                                                                                                                                                                                            TTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATAT                                                                                                 <  2:241364/79‑1                                                                                                                                                                                                                                            TTTCAATTACGCGAAATTTATATGAACGCAATAATATCGC                                                                                                                                            <  1:633351/40‑1                                                                                                                                                                                                                                                                                   CCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTAC                                                    >  2:393209/1‑85                                                                                                                                                                                                                                                                                       ATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTT                                                <  1:393215/85‑1                                                                                                                                                                                                                                                                                                                                                                                                                               ACTGATATTCATCTTTGGCATAACGGGAAATGGGATAAATCGGGTGAATTATCGCAAGGTCGGGCCTACGGAGTATCATTGCCCTGGAATAATAGTCTATTGATTATTGGCGGTGAAACTGCAGGCGGCAAAGCGGTGACGGATTCAGTTTTGATCACTGTGAAGGATAATAAAGTCACAGTACAAAACTAACGCTTCAGGGCCCCGGTAAAGGGGCCCTGCTATCAATTTGTCATTTCAATTACGCGAAATTTATATGAACGCAATAATATCGCCCGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4527667‑4527387 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAAT  >  CP009273/4527631‑4527758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.