New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4527387 =	57 (1.480)	10 (0.270)	8/300	NT	15.4%	coding (25/981 nt)	nanS	9‑O‑acetyl N‑acetylneuraminic acid esterase
	?	CP009273	4527631 =	55 (1.500)					coding (952/1107 nt)	nanM	N‑acetylneuraminic acid mutarotase

GACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC  >  CP009273/4527360‑4527904                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                      gACCAGCAACGGTAAGATAATAGTAATAATCTGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAACTTGATAGCAGGGCCCCTTTACCGGGGCCGTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATc                                                                                                                                                                                                                                                                                    <  1:677521/275‑1 (MQ=255)                    atataatcaatCGGGCTATATTATTGCGTTCAGATAAATTTCGCGTATTTGAAATGACAAATTGTGAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCaa                                                                                                                                                                                                                                                             <  2:316227/267‑1 (MQ=255)                                  GCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCNGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGTCAATGATACTCCGTAGGCCCGACCTTGCGATCATTCACCCGATTTATCCCAT‑TAC‑‑‑CCGTTATGCCAAAGATGAATATCAGt                                                                                                                                                                                                                                               <  1:596722‑M1/275‑1 (MQ=255)                                                ttCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGTGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCGT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGcaaaaattttc                                                                                                                                                                                                                                   >  2:95102/1‑263 (MQ=255)                                                      taAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATg                                                                                                                                                                                                                                                        <  2:257933/246‑1 (MQ=255)                                                                 tgggtGAAATGACCAATTGCTAGCAGGGCCCCTTTACCGTGGCCCTTAAGCTTTTGTTTTGTACTGTGACTTTTTTATCCTTCACAATGATCACAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCGATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCa                                                                                                                                                                                                                <  2:189381/271‑1 (MQ=255)                                                                          tGACTAATTGTTAGCAGGGCCTCTTTACCGGGGCCCTGAAGTGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGANTCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCTGGCCTTCATGCGCATAGTTCTTa                                                                                                                                                                                                       <  1:495186/275‑1 (MQ=255)                                                                                                                                   tgACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATcc                                                                                                                                                                                                                                                                                   >  2:112525/1‑146 (MQ=255)                                                                                                                                       tttATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCAGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAt‑t                                                                                                                                                                                                                                                                              <  1:112526/146‑1 (MQ=255)                                                                                                                                                   cacaGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGGTACTTCACCCGCTTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATNAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCCTCGTTCTTACCGTTCTGGTAATTTTCTCGTGCACCTTTGACTCCGGCCCCTCCGGCAACTAAAAGAGAATCATTGCTTa                                                                                                                                 >  1:600516/1‑272 (MQ=255)                                                                                                                                                   cacaGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCCGTGCTATATGATTTTTTCAGGCTTTCATTCGCATAGTTCTTACCGTTCTGGTATTTTTCTCGTTAACCTTTGAATCCGTCCCCTCCGGCAAATATAAGAGAATCATTgttacacc                                                                                                                              >  1:421131/1‑268 (MQ=255)                                                                                                                                                   cacaGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATc                                                                                                                                                                     >  1:62416/1‑236 (MQ=255)                                                                                                                                                       gTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGc                                                                                                                                                                 <  2:62415/236‑1 (MQ=255)                                                                                                                                                        tGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCGT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCa                                                                                                                         <  1:95103/275‑1 (MQ=255)                                                                                                                                                        tGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATTCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCt                                                                                                                                                                                                                         >  1:2302/1‑179 (MQ=255)                                                                                                                                                        tGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATANCAGTGCTATATGATTTTTTCAGTCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTACTTATcccc                                                                                                                            >  1:594479/1‑272 (MQ=255)                                                                                                                                                          aTCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTa                                                                                                                                                                                                                                                                   >  2:501043/1‑135 (MQ=255)                                                                                                                                                              aaaCTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTATCCCCATTTATCCGAT‑TTC‑‑‑CCGTTATGcc                                                                                                                                                                                                                                                               <  1:501050/135‑1 (MQ=255)                                                                                                                                                                  tGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAgt                                                                                                                                                                                                                                                          >  1:320823/1‑135 (MQ=255)                                                                                                                                                                    aaTCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTa                                                                                                                                                                                                                                                                                      >  2:556458/1‑110 (MQ=255)                                                                                                                                                                    aaTCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGaa                                                                                                                                                                                                                                                      >  2:63516/1‑138 (MQ=255)                                                                                                                                                                      tCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAgtgagt                                                                                                                                                                                                                                                      <  2:320817/136‑6 (MQ=255)                                                                                                                                                                        cGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATccc                                                                                                                                                                                                                                                                                  <  1:556467/110‑1 (MQ=255)                                                                                                                                                                        cGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATc                                                                                                                                                                                                                                                  <  1:63517/138‑1 (MQ=255)                                                                                                                                                                                              ttttAACCGCAAATAACAAATTGACTAGTATGCCAGGGCAATCATCCTTCGTAGGCCCTACCTTACTATAATTCACCCTATTTATCCCAT‑TTC‑‑‑CCGTTATGACAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCTTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGc                                                                                   <  2:594470/274‑1 (MQ=255)                                                                                                                                                                                              gggccccggtaaaggggccctgctatcaatttgtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattATTACTATGTTCTTACCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCt                                                                                                                                                                                                                         >  1:104916‑M2/83‑145 (MQ=255)                                                                                                                                                                                                  cccggtaaaggggccctgctatcaatttgtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattATTACTATGTTCTTACCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCAt                                                                                                                                                                                                                     <  2:104915‑M2/67‑1 (MQ=255)                                                                                                                                                                                                                  tAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGcc                                                                                                                                                                                                                                                               >  2:30664/1‑83 (MQ=255)                                                                                                                                                                                                                      cTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAg                                                                                                                                                                                                                                                           <  1:30664/83‑1 (MQ=255)                                                                                                                                                                                                                       tattatTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑ACGTTATGCCAAAGATGAata                                                                                                                                                                                                                                                    >  1:174273/1‑89 (MQ=255)                                                                                                                                                                                                                        attattCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTa                                                                                                                                                                                                                                                                   >  1:211976/1‑73 (MQ=255)                                                                                                                                                                                                                           attCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAg                                                                                                                                                                                                                                                <  2:174270/89‑1 (MQ=255)                                                                                                                                                                                                                            ttgtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAata                                                                                                                                                                                                                                                    >  2:242048‑M2/53‑84 (MQ=255)                                                                                                                                                                                                                            ttgtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAgg                                                                                                                                                                                                                            >  1:349710‑M2/53‑108 (MQ=255)                                                                                                                                                                                                                            ttCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGcc                                                                                                                                                                                                                                                               <  2:211972/73‑1 (MQ=255)                                                                                                                                                                                                                            ttCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATc                                                                                                                                                                                                                                                  >  1:511529/1‑86 (MQ=255)                                                                                                                                                                                                                              gtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGa                                                                                                                                                                                                                                                       >  1:241369‑M2/51‑79 (MQ=255)                                                                                                                                                                                                                              gtcatttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACATTTGAATCCGGCCCCTCCGGc                                                                                                                                                        >  1:687015‑M2/51‑174 (MQ=255)                                                                                                                                                                                                                               cAGGGCAATGGTACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAata                                                                                                                                                                                                                                                    >  2:305280/1‑81 (MQ=255)                                                                                                                                                                                                                                catttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAg                                                                                                                                                                                                                                                <  1:242053‑M2/36‑1 (MQ=255)                                                                                                                                                                                                                                catttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCtt                                                                                                                                                                                                                        <  2:349704‑M2/60‑1 (MQ=255)                                                                                                                                                                                                                                aGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTg                                                                                                                                                                                                                                              <  2:511522/86‑1 (MQ=255)                                                                                                                                                                                                                                 gggCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTa                                                                                                                                                                                                                                                                   >  2:143018/1‑64 (MQ=255)                                                                                                                                                                                                                                 gggCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTc                                                                                                                                                            >  1:222328/1‑167 (MQ=255)                                                                                                                                                                                                                                  tttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAatat                                                                                                                                                                                                                                                   <  2:241364‑M2/33‑1 (MQ=255)                                                                                                                                                                                                                                  tttcaattacgcgaaatttatatgaacgcaataatatcgcccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAat                                                                                                                                                    <  2:687006‑M2/128‑1 (MQ=255)                                                                                                                                                                                                                                   gCAATGGTACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAg                                                                                                                                                                                                                                                <  1:305286/81‑1 (MQ=255)                                                                                                                                                                                                                                     aaTGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGcc                                                                                                                                                                                                                                                               <  1:143019/64‑1 (MQ=255)                                                                                                                                                                                                                                     aaTGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGc                                                                                                                                                        <  2:222323/167‑1 (MQ=255)                                                                                                                                                                                                                                     aaTGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTCTCAGGCCTTCATGCGAATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGAc                                                                                         <  1:232475/230‑1 (MQ=255)                                                                                                                                                                                                                                       tGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATg                                                                                                                                                                                                                    >  1:536265/1‑105 (MQ=255)                                                                                                                                                                                                                                       tGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAACTACGCCATCTg                                                                                                   >  2:438362/1‑218 (MQ=255)                                                                                                                                                                                                                                           aCTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCa                                                                                                                                                                                                                <  2:536257/105‑1 (MQ=255)                                                                                                                                                                                                                                           aCTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAGCTACGCCATCTGGtga                                                                                               <  1:438369/218‑1 (MQ=255)                                                                                                                                                                                                                                            cTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATc                                                                                                                                                                     >  2:175963/1‑147 (MQ=255)                                                                                                                                                                                                                                             tCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTAt                                                                                                                                                                                                                                                                  >  1:333756/1‑53 (MQ=255)                                                                                                                                                                                                                                               cGTAGGCCCGACCTTGCGATAATTCACCAGATTTATCCCAT‑TTC‑‑‑CCGTTAt                                                                                                                                                                                                                                                                  >  1:534830/1‑51 (MQ=255)                                                                                                                                                                                                                                                gTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGc                                                                                                                                                                 <  1:175966/147‑1 (MQ=255)                                                                                                                                                                                                                                                 tAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTa                                                                                                                                                                                                                                                                   >  1:183010/1‑48 (MQ=255)                                                                                                                                                                                                                                                 tAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCaaa                                                                                                                                                                                                                                                            >  1:76461/1‑55 (MQ=255)                                                                                                                                                                                                                                                 tAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCa                                                                                                                                                                                                                                                              <  2:333750/53‑1 (MQ=255)                                                                                                                                                                                                                                                   ggCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCa                                                                                                                                                                                                                                                              <  2:534822/51‑1 (MQ=255)                                                                                                                                                                                                                                                     cccGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGcc                                                                                                                                                                                                                                                               <  2:183007/48‑1 (MQ=255)                                                                                                                                                                                                                                                     cccGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATg                                                                                                                                                                                                                                                        <  2:76460/55‑1 (MQ=255)                                                                                                                                                                                                                                                     cccGACCCGGCTATAATTCACCCGATTTATCCCAT‑TTG‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCATCCGGCAAat                                                                                                                                                    <  1:646413/155‑1 (MQ=255)                                                                                                                                                                                                                                                         aCCTTACGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CAGTTATGCCAAAGATGACTATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCCTAGTTCTTAACGTTCTGGTAATTTTCTCGTGAACCTTTGCATTCGGCCCCTCCGGCAAATCTAAgaga                                                                                                                                            >  2:326523/1‑159 (MQ=255)                                                                                                                                                                                                                                                             tGCGATAATTGACCCGATTTATCCCAT‑TTC‑‑‑CCGTTAt                                                                                                                                                                                                                                                                  >  1:705476/1‑37 (MQ=255)                                                                                                                                                                                                                                                             tGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGTCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCa                                                                                                                                        <  1:326529/159‑1 (MQ=255)                                                                                                                                                                                                                                                                 aTAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCa                                                                                                                                                                                                                                                              <  2:705466/37‑1 (MQ=255)                                                                                                                                                                                                                                                                         cccgattTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTAc                                                                                                                                                                                                      >  2:393209‑M2/8‑85 (MQ=255)                                                                                                                                                                                                                                                                             attTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGtt                                                                                                                                                                                                  <  1:393215‑M2/82‑1 (MQ=255)                                                                                                                                                                                                                                                                               ttATACCAG‑TTC‑‑‑ATGTTATGGCAAAGAGGAAGATAAGGGCTATATGATTTGTTCCTGCCTTCATGAGCATAGTACTTACCGTTCTGGTAATGTTATAGGGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGATCATCCCCGCACACCCGCCAGCGACGCCATCGGGTGAGGAGACGGGAGCAAGCTCAGTCCATTTTAAATTATTACCGGTGACATCAAGTCCAAATACGGCATCCGTGCGAAATCCTGGTTTGGATTGGcc  <  2:600507/275‑1 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                      GACCAGCAACGGTAAGAACATAGTAATAATCGGGCGATATTATTGCGTTCATATAAATTTCGCGTAATTGAAATGACAAATTGATAGCAGGGCCCCTTTACCGGGGCCCTGAAGCGTTAGTTTTGTACTGTGACTTTATTATCCTTCACAGTGATCAAAACTGAATCCGTCACCGCTTTGCCGCCTGCAGTTTCACCGCCAATAATCAATAGACTATTATTCCAGGGCAATGATACTCCGTAGGCCCGACCTTGCGATAATTCACCCGATTTATCCCAT‑TTC‑‑‑CCGTTATGCCAAAGATGAATATCAGTGCTATATGATTTTTTCAGGCCTTCATGCGCATAGTTCTTACCGTTCTGGTAATTTTCTCGTGAACCTTTGAATCCGGCCCCTCCGGCAAATATAAGAGAATCATTGCTTATCCCCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTTAAATTATTACCGGTGAAATCAAGTTCAAATACGGCATCCGTTCGCAATCCTGGTTTGGCTTCGCC  >  CP009273/4527360‑4527904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.