New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4297427 =	56 (1.460)	8 (0.210)	6/306	NT	12.4%	coding (190/930 nt)	alsK	D‑allose kinase
	?	CP009273	4297594 =	58 (1.550)					coding (23/930 nt)	alsK	D‑allose kinase

CTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCA  >  CP009273/4297178‑4297690                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                         cTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTTGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCATGTTAGGCGCTGAAATAATGGTGCGTATATCTTTACTGACCAGCGCCGGAAAACCCATCACCAAAACAGGCCNGCGAGCGCTAANNNNCCTg                                                                                                                                                                                                                                                       >  2:26829/1‑269 (MQ=255)                        agaTAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGGCGGATATCCCCTCAACAAACCATGACAGCACGCGTAAAAGCCGCTGAGTTGCTCGTCAAACATTTCGCCATTAcc                                                                                                                                                                                                                          >  2:686136/1‑275 (MQ=255)                          aTAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAACAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCg                                                                                                                                                                                                                        >  1:233047/1‑275 (MQ=255)                                       aCCAGTGGTTGTNTAAGGCGGTTTTCGCCTCCGTCCCAGGAGAGTTCCAGGTTAACGTCGCGGGAAAACTCAACCGGAAAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCg                                                                                                                                                                                                             <  2:524030/273‑1 (MQ=255)                                               tttcGTAAGGAGGTTTTCTATAACGTCCCAGGAGAGTTGCAGGTTAACGTCACGGGAAAAATCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAAGGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGa                                                                                                                                                                                                   <  1:26829/272‑1 (MQ=255)                                                     aaGGGGTTTTTATACGACGCCCCAGGAGAGTTGAAGGTTAGCGTCGAGGGAAAACTCAAACGAACAATTAAGCTTATGTTCGGGCTTAATGGCGAGATCATAGAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAACAATGGTGCGTGTATCTTTACGGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTg                                                                                                                                                                                             <  2:233042/275‑1 (MQ=255)                                                                      cGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGGCCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGtt                                                                                                                                                                                                                                                                 >  1:649408/1‑190 (MQ=255)                                                                          ccAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAg                                                                                                                                                                                                                                                             <  2:649399/190‑1 (MQ=255)                                                                          ccAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAgg                                                                                                                                                                                                                >  2:569527/1‑235 (MQ=255)                                                                            aGGAGAGTTGTAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAATGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAgtgt                                                                                                                                                                      <  1:388738/275‑1 (MQ=255)                                                                             ggAGAGTTGCAGGTTAACGTCGCGGGGAAACTCAACCGGAAAATTCAGCGTATTTTCGAGCTTATCGGCGAGATAATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTACGGTTAACTTTACTGACCAGGGCCGGAAAAGCCATCACCAGACCATGACAGCGAGAGTTAAAGCGCCGGCGTTGACAGTCAATCATCACACCGATACGCGACACAAGGCCGGGAGCCACGACATCTGAGGTCCGGTTTTCTTCGCACTGTa                                                                                                                                                                     >  2:173508/1‑275 (MQ=255)                                                                              gagaGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGACGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCgg                                                                                                                                                                                                            <  1:569536/235‑1 (MQ=255)                                                                                  gTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAgg                                                                                                                                                                                                                >  1:89231/1‑227 (MQ=255)                                                                                      cAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCgg                                                                                                                                                                                                            <  2:89230/227‑1 (MQ=255)                                                                                       aGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACagc                                                                                                                                                                                                                                                                        <  2:13231/166‑1 (MQ=255)                                                                                                 cgcgGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACagc                                                                                                                                                                                                                                                                        <  1:715631/156‑1 (MQ=255)                                                                                                             acgccGGACNATTCGGCGTATTTTCGAGCTTATCGGGGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAg                                                                                                                                     <  2:271994/272‑1 (MQ=255)                                                                                                                  ggACAATTCATCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACAAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGat                                                                                                                                <  1:591017/275‑1 (MQ=255)                                                                                                                  ggACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAACTCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAACAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGat                                                                                                                                <  1:686145/275‑1 (MQ=255)                                                                                                                    aCAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACa                                                                                                                                                                                                                                                                          >  2:282727/1‑135 (MQ=255)                                                                                                                     cAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGCCACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGAAATg                                                                                                                             >  1:271999/1‑275 (MQ=255)                                                                                                                        ttCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACagcga                                                                                                                                                                                                                                                                      <  1:282732/135‑1 (MQ=255)                                                                                                                        ctttatcgtcggcacttccggcctgtttaatcatgcggaaaatatcgacgaagcatggagaattatgaccgcgcagattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCg                                                                                                                                                                                                                                  <  1:414281‑M1/41‑1 (MQ=255)                                                                                                                         tCAGCGTATTTTCGAGCTTATCGTCGATATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGtt                                                                                                                         <  1:356434/275‑1 (MQ=255)                                                                                                                            atcgtcggcacttccggcctgtttaatcatgcggaaaatatcgacgaagcatggagaattatgaccgcgcagattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGa                                                                                                                                                                                                                              >  2:414274‑M1/127‑171 (MQ=255)                                                                                                                              gTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGccc                                                                                                                     >  1:262743/1‑274 (MQ=255)                                                                                                                                            aTCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAACGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATAACCACGccc                                                                                                       >  1:185669/1‑274 (MQ=255)                                                                                                                                               ggagagaTANTATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTa                                                                                                   <  2:262738/272‑1 (MQ=255)                                                                                                                                                     agcATATAAATACGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTacgacg                                                                                              <  1:183541/272‑1 (MQ=255)                                                                                                                                                       cATATAAATCCGCCGCTTTTAACGGCAGGTTAGGAGAAGGAATAATGGTGCGTTTATCTTTACTGACCAGCGACGGACATCCCATCACCAGACCATGACAGCGAGGGTTAATGCGCGTGAGATGCTCCACAATCAGTTCTCCGAGACCAGACATCAGGCCGGGAGCAATAACATCTGAGGTCCGCTTTTTATCTCCGTGTAGCGTTGCAACTACTGCTGTCGGAAGCAGCACGCGTATAGGCGTAGACCACATACCCACGTCCgaacgaaaatta                                                                                           >  2:719239/1‑264 (MQ=255)                                                                                                                                                              aTCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAACGCGGTTATGCGTTGCCCCCATATCCACGCCCGCTACGCCGTTAT‑Gc                                                                                       >  1:86656/1‑271 (MQ=255)                                                                                                                                                               tCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCggg                                                                                                                                                                                                           >  2:324997/1‑155 (MQ=255)                                                                                                                                                                   ccgcTGTTAACGGCCGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGACCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAACCCGAGATGCGTTGACCCCATATCCCAGCCCGCCACGAACTTATCGTTGttttc                                                                                >  2:724242/1‑273 (MQ=255)                                                                                                                                                                   ccgcTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCa                                                                                                                                                                                                       <  1:325003/155‑1 (MQ=255)                                                                                                                                                                   ccgcTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACa                                                                                                                                         >  1:244755/1‑217 (MQ=255)                                                                                                                                                                       tGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAg                                                                                                                                     <  2:244750/217‑1 (MQ=255)                                                                                                                                                                       tGTTAACGGCAGGTTAGGCGTAG‑AATAATGGTGCGTTTATCTTTACTGACTAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGtt                                                                                                                         <  1:361530/228‑1 (MQ=255)                                                                                                                                                                            gcatggagaattatgaccgcgcagattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTc                                                                                                                                                                                                                                   <  2:205674‑M1/40‑1 (MQ=255)                                                                                                                                                                                ggagaattatgaccgcgcagattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCg                                                                                                                                                                                                                               >  1:205678‑M1/75‑118 (MQ=255)                                                                                                                                                                                       ggCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACagc                                                                                                                                                                                                                                                                        <  2:680122/70‑1 (MQ=255)                                                                                                                                                                                          gTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCCCCGGAAATCCCATCACCTGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTNGTCAATCATTTCGCCGATATCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTg                                                       <  1:566009/275‑1 (MQ=255)                                                                                                                                                                                             gAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAg                                                    >  2:686027/1‑275 (MQ=255)                                                                                                                                                                                              gcgcagattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCg                                                                                                                                                                                                                                  <  2:381532‑M1/41‑1 (MQ=255)                                                                                                                                                                                                  agattctggctgcaaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGa                                                                                                                                                                                                                              >  1:381538‑M1/57‑101 (MQ=255)                                                                                                                                                                                                     ggTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGAAGACAAAAGCGGATATGCGTTGCCCCCATATCCACCCCCGCTCCCACGTTAT‑GCTGtttt                                                                                 >  1:401126/1‑238 (MQ=255)                                                                                                                                                                                                      gTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCCCCTTCTGCTGTCCGGCGACAAAAGCGGATATGAGTTGCCCCCATATCCACGCCCGATCCGACGATAT‑GCTGTTCTGGCCAGAGGCGGTACATCGCTTTTTGCAGCCAGa                                               >  2:282910/1‑271 (MQ=255)                                                                                                                                                                                                         cGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCttttttt                                                                                                                                                                              >  1:102676/1‑142 (MQ=255)                                                                                                                                                                                                         cGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGCATCTgc                                         >  1:326267/1‑274 (MQ=255)                                                                                                                                                                                                         cGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCCCTACGACGTTAT‑GCTGTTTTTTCATGAGGCTGTTNCTCCCTTTTTTCATCCATAAtttac                                         >  2:463441/1‑270 (MQ=255)                                                                                                                                                                                                          gTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCTCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcgc                                       <  1:453275/275‑1 (MQ=255)                                                                                                                                                                                                          gTTTAGCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATNATTTCGCCNATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGATGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcgc                                       <  1:482566/275‑1 (MQ=255)                                                                                                                                                                                                             tATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCa                                                                                                                                                                          <  2:102675/142‑1 (MQ=255)                                                                                                                                                                                                              caaaaagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCg                                                                                                                                                                                                                                  <  2:718052‑M1/41‑1 (MQ=255)                                                                                                                                                                                                                 tttACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGNCGATACCCNACACCAGGCCGGCAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATa                                <  1:463448/275‑1 (MQ=255)                                                                                                                                                                                                                  ttACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGATCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATaa                               <  1:724252/275‑1 (MQ=255)                                                                                                                                                                                                                  aagcgaggtacagcctcatgcaaaaacagcataacgtcgtAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGa                                                                                                                                                                                                                              >  1:718062‑M1/41‑85 (MQ=255)                                                                                                                                                                                                                   tACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACt                                                                                                                                                                                                 >  2:112319/1‑113 (MQ=255)                                                                                                                                                                                                                       gACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTg                                                                                                                                                                                             <  1:112320/113‑1 (MQ=255)                                                                                                                                                                                                                        aCCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAg                                                                                                                                                                                                                                                     >  1:169101/1‑56 (MQ=255)                                                                                                                                                                                                                        aCCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCg                                                                                                                                                                                                                                  >  2:267568/1‑75 (MQ=255)                                                                                                                                                                                                                            gcgcCGGAAATCCCATCACCAGACCATTACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGc                     <  1:173511/275‑1 (MQ=255)                                                                                                                                                                                                                            gcgcCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGc                                                                                                                                                                                                                                                 <  2:169098/56‑1 (MQ=255)                                                                                                                                                                                                                            gcgcCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGa                                                                                                                                                                                                                              <  1:267573/75‑1 (MQ=255)                                                                                                                                                                                                                                       ccccTCTCCATACCATTCCAGCGACCGTTAAAGCGCCTGTGTTGTTCGTCAATCATTTTGCCGATAACCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCCGTGTATCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCCCGCCCGCGCCGACGATAT‑GCTGTTTTCTCCTGAGGTCGTACCTCGCTTTTTGGAACGAAAATCTGCTCGGTCATAATCCTCCAGGTCtcgtcggttt          >  2:671780/1‑271 (MQ=255)                                                                                                                                                                                                                                       cccATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGt                                                                                             >  2:616233/1‑193 (MQ=255)                                                                                                                                                                                                                                           tCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑g                                                                                        <  1:616242/193‑1 (MQ=255)                                                                                                                                                                                                                                              ccAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCGCGTAAATCATTTCGCCGATACCCGACACCAGGCCGGTAGCAATGACTTCTGCGGGCCACTTTTGTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCATAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCg    <  1:402440/274‑1 (MQ=255)                                                                                                                                                                                                                                               cAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCa  <  1:686036/275‑1 (MQ=255)                                                                                                                                                                                                                                                  aCCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAg                                                                                                                                                                    >  2:495692/1‑111 (MQ=255)                                                                                                                                                                                                                                                      tGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAg                                                                                                                                                                                                         >  1:403256/1‑70 (MQ=255)                                                                                                                                                                                                                                                      tGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTATCGCAGTGTAGCGtt                                                                                                                                                                <  1:495699/111‑1 (MQ=255)                                                                                                                                                                                                                                                       gACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGcc                                                                                                                      >  2:602702/1‑152 (MQ=255)                                                                                                                                                                                                                                                          AGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAAt                                                                                                                                                                                                     >  2:403249‑M1/1‑70 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                         CTGCGAACCCCATCCCCGTACCGAGATAGGCCGCCAGAACCAGTTGTTGCGTAAGGCGGTTTTCTACTACGTCCCAGGAGAGTTGCAGGTTAACGTCGCGGGAAAACTCAACCGGACAATTCAGCGTATTTTCGAGCTTATCGGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCA  >  CP009273/4297178‑4297690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.