New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4297427 =	56 (1.460)	8 (0.210)	6/306	NT	12.4%	coding (190/930 nt)	alsK	D‑allose kinase
	?	CP009273	4297594 =	58 (1.550)					coding (23/930 nt)	alsK	D‑allose kinase

GGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCGTACTCCAGACCTTCTCGTTCACGCCATGCCTTCAGTTCGGCAAGTTTATCCAGCATTTCAGGA  >  CP009273/4297320‑4297855                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                       ggagagaTANTATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTa                                                                                                                                                                                                                                                                        <  2:262738/272‑1 (MQ=255)       agcATATAAATACGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTacgacg                                                                                                                                                                                                                                                                   <  1:183541/272‑1 (MQ=255)                aTCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAACGCGGTTATGCGTTGCCCCCATATCCACGCCCGCTACGCCGTTAT‑Gc                                                                                                                                                                                                                                                            >  1:86656/1‑271 (MQ=255)                     ccgcTGTTAACGGCCGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGACCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAACCCGAGATGCGTTGACCCCATATCCCAGCCCGCCACGAACTTATCGTTGttttc                                                                                                                                                                                                                                                     >  2:724242/1‑273 (MQ=255)                                            gTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCCCCGGAAATCCCATCACCTGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTNGTCAATCATTTCGCCGATATCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTg                                                                                                                                                                                                                            <  1:566009/275‑1 (MQ=255)                                               gAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAg                                                                                                                                                                                                                         >  2:686027/1‑275 (MQ=255)                                                       ggTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGAAGACAAAAGCGGATATGCGTTGCCCCCATATCCACCCCCGCTCCCACGTTAT‑GCTGtttt                                                                                                                                                                                                                                                      >  1:401126/1‑238 (MQ=255)                                                        gTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCCCCTTCTGCTGTCCGGCGACAAAAGCGGATATGAGTTGCCCCCATATCCACGCCCGATCCGACGATAT‑GCTGTTCTGGCCAGAGGCGGTACATCGCTTTTTGCAGCCAGa                                                                                                                                                                                                                    >  2:282910/1‑271 (MQ=255)                                                           cGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGCATCTgc                                                                                                                                                                                                              >  1:326267/1‑274 (MQ=255)                                                           cGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCCCTACGACGTTAT‑GCTGTTTTTTCATGAGGCTGTTNCTCCCTTTTTTCATCCATAAtttac                                                                                                                                                                                                              >  2:463441/1‑270 (MQ=255)                                                            gTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCTCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcgc                                                                                                                                                                                                            <  1:453275/275‑1 (MQ=255)                                                            gTTTAGCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATNATTTCGCCNATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGATGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcgc                                                                                                                                                                                                            <  1:482566/275‑1 (MQ=255)                                                                   tttACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGNCGATACCCNACACCAGGCCGGCAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATa                                                                                                                                                                                                     <  1:463448/275‑1 (MQ=255)                                                                    ttACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGATCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATaa                                                                                                                                                                                                    <  1:724252/275‑1 (MQ=255)                                                                              gcgcCGGAAATCCCATCACCAGACCATTACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGc                                                                                                                                                                                          <  1:173511/275‑1 (MQ=255)                                                                                         ccccTCTCCATACCATTCCAGCGACCGTTAAAGCGCCTGTGTTGTTCGTCAATCATTTTGCCGATAACCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCCGTGTATCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCCCGCCCGCGCCGACGATAT‑GCTGTTTTCTCCTGAGGTCGTACCTCGCTTTTTGGAACGAAAATCTGCTCGGTCATAATCCTCCAGGTCtcgtcggttt                                                                                                                                                                               >  2:671780/1‑271 (MQ=255)                                                                                         cccATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGt                                                                                                                                                                                                                                                                  >  2:616233/1‑193 (MQ=255)                                                                                             tCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑g                                                                                                                                                                                                                                                             <  1:616242/193‑1 (MQ=255)                                                                                                ccAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCGCGTAAATCATTTCGCCGATACCCGACACCAGGCCGGTAGCAATGACTTCTGCGGGCCACTTTTGTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCATAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCg                                                                                                                                                                         <  1:402440/274‑1 (MQ=255)                                                                                                 cAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCa                                                                                                                                                                       <  1:686036/275‑1 (MQ=255)                                                                                                              CGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGc                                                                                                                                                                                                                                  <  1:142272‑M1/203‑1 (MQ=255)                                                                                                              CGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTcc                                                                                                                                                                                              <  2:291479‑M1/239‑1 (MQ=255)                                                                                                              CGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTAGTCGATATTTTCCGCATGATTAaacaagc                                                                                                                                                          <  1:266937‑M1/275‑4 (MQ=255)                                                                                                                  cgTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCtttt                                                                                                                                                                                                                              <  2:142271/203‑1 (MQ=255)                                                                                                                  cgTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGc                                                                                                                                                                                          <  1:291485/239‑1 (MQ=255)                                                                                                                         gagcCTGAGTTGCTCGTAAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGTTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCcg                                                                                                                                               <  1:440898/273‑1 (MQ=255)                                                                                                                                    gCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATAttt                                                                                                                                                                             >  1:203744/1‑234 (MQ=255)                                                                                                                                     cTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGt                                                                                                                                                                                                                                                                  >  1:601637/1‑149 (MQ=255)                                                                                                                                         tCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑g                                                                                                                                                                                                                                                             <  2:601628/149‑1 (MQ=255)                                                                                                                                                      cGATACCCGACACCAGGCCGGTGGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCAt                                                                                                                  <  1:282915/275‑1 (MQ=255)                                                                                                                                                                              cAATGTCTTCTTCGGTCTGCTTTTTTTCGCATTGTAGCCTTTCACCTTCTGCTGTCCTCAGACAAAAGCGTATATGCTATGCCCCCATATCCTCGCCCGCTACGACGTTAT‑GCTTTTTTTGCATGATGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGTTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAACCAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCATTTTTTCGTATGTTGCCTGGt                                                                                           <  1:719249/274‑1 (MQ=255)                                                                                                                                                                                           ggTCCGCTTTTTTTCGCAGTGTTGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTc                                                                              <  1:571377/274‑1 (MQ=255)                                                                                                                                                                                             tCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAg                                                                                                                                                    >  1:343133/1‑202 (MQ=255)                                                                                                                                                                                               cGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAAAAGGCCGGAAGTGCCGAAAATAAAg                                                                                                                                      >  2:652257/1‑214 (MQ=255)                                                                                                                                                                                                 cTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGcc                                                                                                                                                <  2:343127/202‑1 (MQ=255)                                                                                                                                                                                                   ttttttCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGNGTTGCCCCCAGATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACAt                                                                                                                                  <  1:652266/214‑1 (MQ=255)                                                                                                                                                                                                        ttgcgctacaGCGTTTCCCCTTCTGCTCTCCCCAGACCAAAGCCGTTATGCGTTGCCCCCATATCCTCGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTCAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCg                                                                 <  2:219780/265‑1 (MQ=255)                                                                                                                                                                                                         cGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAAt                                                                                                                                                                                                                  >  2:69675/1‑128 (MQ=255)                                                                                                                                                                                                            aGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGTCCGGCAGTTCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCATAAGTTGCCTGGTTGCAGGAACCTTACACCTCAATTACGTACt                                                             >  1:335576/1‑274 (MQ=255)                                                                                                                                                                                                             gtgtAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTgc                                                                                                                                                                                                              <  1:69676/128‑1 (MQ=255)                                                                                                                                                                                                                     tttGACTTTCGGCTGTCCGCCGCCAATAGCGGTTAGGCGTTTCCCCCTTATCCACGTCCTCTATGTCGTTAT‑GCTGTTTTTGCATTAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCCCGGTCATAATCCTCCATGCTTCGGTGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCTACGGTATAGACACCCTCTCCTGCCGGCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCCCAATTTCGTACTTCAGAccctt                                                   <  2:185666/275‑4 (MQ=255)                                                                                                                                                                                                                        cACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCTGTGGCCCCATAGCCCCGCCCGCTACGACGGGAT‑GCTGTATTTGCATGAGGTCGTACCTCGCTCTTTGCAGCCAGAAGCTGCGCGGGCATCATTCTCCAGGCTTCGTCGATAGTTTCCGCATGATTAAACAGGCAGGGAGTGCCGACGATAAAGACATCCGCCCCTTCCGCCATCAGTATTACGACAGTTACCTGGTTGCAAGAACCGTCCACGTAGAATGCGTACTCCATACCtccccc                                                >  2:160070/1‑270 (MQ=255)                                                                                                                                                                                                                              ctgctgTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAAt                                                                     >  1:219785/1‑248 (MQ=255)                                                                                                                                                                                                                                     ccGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATc                                                                                                                                                                                                                 >  1:280491/1‑101 (MQ=255)                                                                                                                                                                                                                                     ccGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCt                                                                                                                                                                                         >  2:15635/1‑125 (MQ=255)                                                                                                                                                                                                                                      tcggcgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCtt                                                                                                                                                                                                                                >  1:718062‑M2/46‑85 (MQ=255)                                                                                                                                                                                                                                      tcggcgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCt                                                                                                                                                                                                                >  1:381538‑M2/46‑101 (MQ=255)                                                                                                                                                                                                                                      tcggcgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGAt                                                                                                                                          >  2:414274‑M2/46‑171 (MQ=255)                                                                                                                                                                                                                                       cggcgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTcc                                                                                                                                                                                              >  1:205678‑M2/45‑118 (MQ=255)                                                                                                                                                                                                                                         aGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcg                                                                                                                                                                                                             <  2:280486/101‑1 (MQ=255)                                                                                                                                                                                                                                         aGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTc                                                                                                                                                                                                        >  2:657946/1‑106 (MQ=255)                                                                                                                                                                                                                                         aGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTtcgt                                                                                                                                                                                     <  1:15635/125‑1 (MQ=255)                                                                                                                                                                                                                                          cgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTg                                                                                                                                                                                                                            <  2:718052‑M2/44‑1 (MQ=255)                                                                                                                                                                                                                                          cgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTgcgc                                                                                                                                                                                                            <  2:381532‑M2/60‑1 (MQ=255)                                                                                                                                                                                                                                          cgaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAg                                                                                                                                      <  1:414281‑M2/130‑1 (MQ=255)                                                                                                                                                                                                                                           gaaatgattgacgagcaactcaggcgctttaacgctcgctACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGc                                                                                                                                                                                          <  2:205674‑M2/78‑1 (MQ=255)                                                                                                                                                                                                                                           aCAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCGTACTCCAGACCTTCTCGTTCACACCATGCCtccct                              >  2:634238/1‑270 (MQ=255)                                                                                                                                                                                                                                             aaaaGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATaa                                                                                                                                                                                                    <  1:657955/106‑1 (MQ=255)                                                                                                                                                                                                                                                          cGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCACGATTATACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCGTACTCCAGACCTTCTCGTTCACGCCATGCCTTCAGTTCGGCAAGTTTATcc              <  1:634247/275‑1 (MQ=255)                                                                                                                                                                                                                                                              tcccccATCTCGACGCCCGCTACGAAGATAT‑GCTGTCTTTGCATGAGGCTGTATCTCGCATTTTGCAGCCAGAATCTGCGCGGGCAGAATTCTCCCTGCTTCGTCGTTATTATCCGCATGATTACACATGCCGGAAGAGCAGACTATAAAGa                                                                                                                                     >  2:303123/2‑152 (MQ=255)                                                                                                                                                                                                                                                              gCCCCCATATGCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCtt                                                                                                                                                                                                                                >  1:703229/1‑61 (MQ=255)                                                                                                                                                                                                                                                               cccccATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAg                                                                                                                                                    >  2:714068/1‑136 (MQ=255)                                                                                                                                                                                                                                                               cacccATCTGCCCGCCCGCTACGCCGCTGT‑GCTGTTGTTGCCTGAGGCTGTCCCCCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGCTATTTGCCGCATGATTAAACAGGCCGCAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTCGCCTCAGTTGCCTGGATGCAGGAACCGTCCACCTCACTCTCGCACCCCAGCCCTTCTTGTTCACGCCATGCCTTCAGTTCGGCAAtttaactacgcag         >  2:102463/3‑265 (MQ=255)                                                                                                                                                                                                                                                                  ccATATCCACGCCCGCTACGACTTTAT‑GCTGGTTTTGCATGAGGCTTTACCTCGCTTTGTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTTGTCGATATTTGCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATc                                                                                                                                 <  1:303129/152‑1 (MQ=255)                                                                                                                                                                                                                                                                  ccATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTg                                                                                                                                                                                                                            <  2:703220/61‑1 (MQ=255)                                                                                                                                                                                                                                                                   cATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGcc                                                                                                                                                <  1:714078/136‑1 (MQ=255)                                                                                                                                                                                                                                                                    atatCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTgccg                                                                                                                      >  2:168595/1‑161 (MQ=255)                                                                                                                                                                                                                                                                      ttCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCGTACTCCAGACCTTCTCGTTCACGCCATGCCGTCAGTTCGGCAAGTTTATCCAGCATTTCAGGa  <  1:160073/274‑1 (MQ=255)                                                                                                                                                                                                                                                                       tCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATAttt                                                                                                                                                                             >  1:300648/1‑103 (MQ=255)                                                                                                                                                                                                                                                                        ccACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCAt                                                                                                                  <  1:168598/161‑1 (MQ=255)                                                                                                                                                                                                                                                                           cGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCg                                                                                                                                                                         <  2:300642/103‑1 (MQ=255)                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                       GGCGAGATCATATAAATCCGCCGCTGTTAACGGCAGGTTAGGCGTAGAAATAATGGTGCGTTTATCTTTACTGACCAGCGCCGGAAATCCCATCACCAGACCATGACAGCGAGCGTTAAAGCGCCTGAGTTGCTCGTCAATCATTTCGCCGATACCCGACACCAGGCCGGGAGCAATGACTTCTGCGGTCCGCTTTTTTTCGCAGTGTAGCGTTTCACCTTCTGCTGTCCGCAGACAAAAGCGGATATGCGTTGCCCCCATATCCACGCCCGCTACGACGTTAT‑GCTGTTTTTGCATGAGGCTGTACCTCGCTTTTTGCAGCCAGAATCTGCGCGGTCATAATTCTCCATGCTTCGTCGATATTTTCCGCATGATTAAACAGGCCGGAAGTGCCGACGATAAAGACATCCGCCCCTGCCGCCATCAGTTTTTCGTAAGTTGCCTGGTTGCAGGAACCGTCCACCTCAATTTCGTACTCCAGACCTTCTCGTTCACGCCATGCCTTCAGTTCGGCAAGTTTATCCAGCATTTCAGGA  >  CP009273/4297320‑4297855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.