New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 4427589125 (3.250)12 (0.330) 8/296 NT 11.1% coding (66/939 nt) ytfI uncharacterized protein
?CP009273 = 4427843 75 (2.070)coding (320/939 nt) ytfI uncharacterized protein

Only 100 of 150 total aligned reads displayed.

TGATTCTGCCATCCTGATTTCTCCCAACCTAAAAAGTTATAAATAAAAAGAGATTGTATTTAAAGTGCAAAAATTCAATTGCTAATAAGTTACATTTTAATAATGAGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCC  >  CP009273/4427341‑4427859
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                              
tGATTCTTACATCCTGATTTCTCCCAACCTAAAAAGTTATAAATAAAAAGAGATTGTATTTAAAGTGCAAAAATTCAATTGCTAATAAGTTACATTTTAATAATGAGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAAtttttt                                                                                                                                                                                                                                                      <  1:106435/275‑1 (MQ=255)
   ttCTGCCATCCTGATTTCTCCCAACCTAAAAAGTTATAAATAAAAAGAGATTGTATTTAAAGTGCAAAAATTCAATTGCTAATAAGTTACATTTTAATAATGAGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGAAACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaa                                                                                                                                                                                                                                                   >  2:8648/1‑275 (MQ=255)
                                         aaaaaaaaGAGAATGTATTTAAAGTGTAAAATTTAAATTTCTAATAAGTTACATTTTAATAATGTGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCATGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGAttt                                                                                                                                                                                                             <  2:340467/272‑1 (MQ=255)
                                                                         ttCAATTGCTAATAAGTTACATTTTAATAATGAGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAg                                                                                                                                                                             <  1:8648/275‑1 (MQ=255)
                                                                                                            gTTTTTTGATAGTTTACTTCTATAGTTAGATCTTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCAATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGACTGTTAACTTTGAGGGAGTTCTTTCGTTGTGCAATTCAGATTTNTTAAAgcag                                                                                                                                          >  2:275496/1‑272 (MQ=255)
                                                                                                                             ttCTATAGTGAGATATTTAATGGCGACATAAAGTAAACAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTtcat                                                                                                                         <  1:442551/275‑1 (MQ=255)
                                                                                                                                       agaTATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAAcatc                                                                                                                                                                                                                                            >  1:117912/1‑150 (MQ=255)
                                                                                                                                           atTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaa                                                                                                                                                                                                                                                   <  1:525055/139‑1 (MQ=255)
                                                                                                                                              tAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACa                                                                                                                                                                                                                                                             <  1:596329/126‑1 (MQ=255)
                                                                                                                                              tAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTATg                                                                                                                                                                                   >  2:450601/1‑200 (MQ=255)
                                                                                                                                               aaTGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAac                                                                                                                                                                                                                                                                        >  1:227253/1‑114 (MQ=255)
                                                                                                                                                  ggCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAggg                                                                                                                                                                               <  1:450608/200‑1 (MQ=255)
                                                                                                                                                   gCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACAt                                                                                                                                                                                                                                                                    <  2:227248/114‑1 (MQ=255)
                                                                                                                                                    cGACATAAAGTATCCAAATAAAATAAGGTTGTCATATGTTACCCAGGAACAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAANTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGcc                                                                                                  <  1:539243/275‑1 (MQ=255)
                                                                                                                                                    cGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACa                                                                                                                                                                                                                                                                             >  2:121383/1‑104 (MQ=255)
                                                                                                                                                    cGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTgg                                                                                                                                                                                                                 >  2:496820/1‑164 (MQ=255)
                                                                                                                                                      aCATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTa                                                                                                                                                                                                                                                    >  2:100680/1‑127 (MQ=255)
                                                                                                                                                        aTAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACaaaaa                                                                                                                                                                                                                                                                         <  1:121384/104‑1 (MQ=255)
                                                                                                                                                        aTAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATCCATTTAAGAAAAAAGATTGGAttt                                                                                                                                                                                                             <  1:496827/164‑1 (MQ=255)
                                                                                                                                                          aaaGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCa                                                                                                                                                                                                                                                                 <  1:69351/110‑1 (MQ=255)
                                                                                                                                                          aaaGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaacaa                                                                                                                                                                                                                                                <  1:100681/127‑1 (MQ=255)
                                                                                                                                                          aaaGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTa                                                                                                                                                                                                                                                    <  2:663664/123‑1 (MQ=255)
                                                                                                                                                                aCCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTa                                                                                                                                                                                                      >  1:79705/1‑163 (MQ=255)
                                                                                                                                                                 ccAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTATTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGttt                                                                                      >  2:609904/1‑274 (MQ=255)
                                                                                                                                                                    aataaaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGAt                                                                                                                                                                                                  <  2:79704/163‑1 (MQ=255)
                                                                                                                                                                     ataaaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaa                                                                                                                                                                                                                                                   <  2:492035/113‑1 (MQ=255)
                                                                                                                                                                      taaaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGcc                                                                                                                                                                                              >  1:481453/1‑165 (MQ=255)
                                                                                                                                                                        aaataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAAtttttt                                                                                                                                                                                                                                                      <  2:234768/107‑1 (MQ=255)
                                                                                                                                                                          ataaGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGtt                                                                                                                                                                                          <  2:481446/165‑1 (MQ=255)
                                                                                                                                                                              ggTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGaaaa                                                                                                                                                                                                                         >  1:183861/1‑130 (MQ=255)
                                                                                                                                                                              ggTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCAc                                                                                                     >  2:209866/1‑246 (MQ=255)
                                                                                                                                                                                  gTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAAttt                                                                                                                                                                                                                                                         >  2:651951/1‑94 (MQ=255)
                                                                                                                                                                                  gTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCa                                                                                                 <  1:209870/246‑1 (MQ=255)
                                                                                                                                                                                   tCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACANATTCAAACNATTTTTTTAACATCATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGcc                                                                      <  1:480794/272‑1 (MQ=255)
                                                                                                                                                                                   tCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAAttttttt                                                                                                                                                                                                                                                     >  1:435824/1‑97 (MQ=255)
                                                                                                                                                                                   tCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTCAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGAAGTTCTTTCGTTGCGAAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAgagacatccaa                                                                    >  2:78416/1‑264 (MQ=255)
                                                                                                                                                                                    cATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATacaaaaacactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgaacagtttcattttttgatgaaagcacctgataaccacttttatcaatctgagttgcgcaacgaaagaactccctcaaagttaacaggctatcataattcgaaatccaatcttttttctt                                                                  >  1:166278‑M1/1‑69 (MQ=255)
                                                                                                                                                                                    cATATGTTACACAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATacaaaaacactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgaacagtttcattttttgatgaaagcacctgataaccacttttatcaatctgagttgcgcaacgaaagaactccctcaaagttaacaggctatcataattcgaaatccaatcttttttctt                                                                  >  1:704455‑M1/1‑69 (MQ=255)
                                                                                                                                                                                     atatGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATtcaaatccactacctcgcaatgtcattgtatattcggcac                                                                                                                                                                                                                                        >  1:147437‑M1/1‑68 (MQ=255)
                                                                                                                                                                                     atatGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATtcaaatccactacctcgcaatgtcat                                                                                                                                                                                                                                                      >  2:110545‑M1/1‑68 (MQ=255)
                                                                                                                                                                                       atGTTATCCAGGATCAGACACAATAAGTTTATTGGTGCTGTGGAGTTATTTATAAAGTCTTCGTATACTAAAACACATTCAAACAATTTTTTTaaca                                                                                                                                                                                                                                                 <  2:435817/97‑1 (MQ=255)
                                                                                                                                                                                        tGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGAtt                                                                                                                                                                                                              >  2:303799/1‑131 (MQ=255)
                                                                                                                                                                                         gTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATtcaaatccactacctcgcaatgtcattgtatattcggcaccgtt                                                                                                                                                                                                                                    <  2:147436‑M1/108‑45 (MQ=255)
                                                                                                                                                                                          ttACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATacaaaaacactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgaacagtttcattttttgatgaaagcacctgataaccacttttatcaatctgagttgcgcaacgaaagaactccctcaaagttaacaggctatcataattcgaaatccaatcttttttcttaaatgc                                                            <  2:704445‑M1/275‑213 (MQ=255)
                                                                                                                                                                                          ttACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCa                                                                                                                                                                                                                                                                 >  1:87797/1‑78 (MQ=255)
                                                                                                                                                                                            aCCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACa                                                                                                                                                                                                                                                                             <  2:511449/64‑1 (MQ=255)
                                                                                                                                                                                            aCCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGa                                                                                                                                                                                                          <  1:303805/131‑1 (MQ=255)
                                                                                                                                                                                            aCCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACg                                                          <  1:254145/275‑1 (MQ=255)
                                                                                                                                                                                             cccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTAt                                                                                                                                                                                                     >  2:212104/1‑135 (MQ=255)
                                                                                                                                                                                             cccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCTTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTAACGCCATGGATAAGTTACTTACCAGTTCCAGACTAAAATATAACga                                                         >  2:34238/1‑274 (MQ=255)
                                                                                                                                                                                             cccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACgg                                                         >  1:82501/1‑275 (MQ=255)
                                                                                                                                                                                             cccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAAATAACg                                                          >  1:443607/1‑274 (MQ=255)
                                                                                                                                                                                             cccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTAAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTg                                                                                                          >  1:367532/1‑226 (MQ=255)
                                                                                                                                                                                              ccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACa                                                                                                                                                                                                                                                             <  2:87796/78‑1 (MQ=255)
                                                                                                                                                                                              ccAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACa                                                                                                                                                                                                                                                             <  2:263506/78‑1 (MQ=255)
                                                                                                                                                                                                 ggATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCg                                                                                                                                                                                                           <  2:442917/125‑1 (MQ=255)
                                                                                                                                                                                                 ggATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGa                                                                                                                                                       <  2:180448/177‑1 (MQ=255)
                                                                                                                                                                                                 ggATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCtt                                                                    <  1:339516/260‑1 (MQ=255)
                                                                                                                                                                                                 ggATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGACTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAAATAACgg                                                         >  1:360565/1‑271 (MQ=255)
                                                                                                                                                                                                  gATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAtttt                                                                           >  2:583998/1‑252 (MQ=255)
                                                                                                                                                                                                  gATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTg                                                       <  1:609913/272‑1 (MQ=255)
                                                                                                                                                                                                   aTCAGACACTATAATTTTATTGGTGCGGTTGAGTTATTTTTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGa                                                   <  1:202441/275‑1 (MQ=255)
                                                                                                                                                                                                       gACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTa                                                                                                                                                                                                      >  1:351112/1‑124 (MQ=255)
                                                                                                                                                                                                       gACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGt                                                                                                                                         >  1:639986/1‑185 (MQ=255)
                                                                                                                                                                                                       gACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGAATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCCTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCGTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTTCCGAaaat                                               >  1:678403/1‑275 (MQ=255)
                                                                                                                                                                                                          acaATAATTTTATTTGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACa                                            <  1:222580/275‑1 (MQ=255)
                                                                                                                                                                                                           caATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATc                                                                                                                                     <  2:639977/185‑1 (MQ=255)
                                                                                                                                                                                                            aataatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGAt                                                                                                                                                                                                               >  2:638204/1‑110 (MQ=255)
                                                                                                                                                                                                            aataatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGAt                                                                                                                                                                                                  >  2:362824/1‑123 (MQ=255)
                                                                                                                                                                                                            aataatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATAAACAAt                                          >  1:78371/1‑275 (MQ=255)
                                                                                                                                                                                                              taatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACaaa                                                                                                                                                                                                                                                                           >  1:39483/1‑48 (MQ=255)
                                                                                                                                                                                                              taatTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGc                                                      >  2:262566/1‑261 (MQ=255)
                                                                                                                                                                                                                  tttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAaca                                                                                                                                                                                                                                                                       <  2:39483/48‑1 (MQ=255)
                                                                                                                                                                                                                  tttATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGaa                                                  <  1:262571/261‑1 (MQ=255)
                                                                                                                                                                                                                    tATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATacaaatccactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgcacagtttcattttttgctgaaagcacctgatacccacttttatcaatctgagttgcgcaacgaacgaactccctcaaagttaacaggctatcatcattcgaaatccaatcttttttcttaaatgcatgatggattttgttaaaa                                         >  1:270845‑M1/1‑37 (MQ=255)
                                                                                                                                                                                                                      ttGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAAttttt                                                                                                                                                                                                                                                       >  1:576595/1‑60 (MQ=255)
                                                                                                                                                                                                                      ttGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTAt                                                                                                                                                                                                     >  2:698380/1‑110 (MQ=255)
                                                                                                                                                                                                                          tGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaa                                                                                                                                                                                                                                                   <  2:576586/60‑1 (MQ=255)
                                                                                                                                                                                                                          tGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAg                                                                                                                                                                                                <  1:138923/111‑1 (MQ=255)
                                                                                                                                                                                                                          tGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATaa                                                                                                                                                <  2:460199/159‑1 (MQ=255)
                                                                                                                                                                                                                           tcGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACttt                                                                                                                                                                                    >  2:193808/2‑122 (MQ=255)
                                                                                                                                                                                                                            cGGTGGAGTTATTTGTAAAGTCTTCGTATACAAACACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTa                                                                                                                                                                                                      >  1:551824/1‑103 (MQ=255)
                                                                                                                                                                                                                            cGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGAttt                                                                                                                                                                                                             >  2:135794/1‑96 (MQ=255)
                                                                                                                                                                                                                            cGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGt                                                                                                                                                                    >  2:336566/1‑137 (MQ=255)
                                                                                                                                                                                                                                ggAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAGAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTgcg                                                                                                                                                                <  1:336572/137‑1 (MQ=255)
                                                                                                                                                                                                                                ggAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGAt                                                                                                                                                                                                  <  2:551815/103‑1 (MQ=255)
                                                                                                                                                                                                                                       tttGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTaac                                                                                                                                                                                                                                                  <  2:612957/48‑1 (MQ=255)
                                                                                                                                                                                                                                         tGTAAAGTCTTAGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCATTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacg             >  1:624312‑M2/1‑270 (MQ=255)
                                                                                                                                                                                                                                             aaGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGACTGTTAACt                                                                                                                                                                                      >  2:148680/1‑102 (MQ=255)
                                                                                                                                                                                                                                                  ttCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAAc                                                                                                            >  2:534684/1‑171 (MQ=255)
                                                                                                                                                                                                                                                  ttCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATCTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGAt                                                                                                                                                      >  2:187298/1‑129 (MQ=255)
                                                                                                                                                                                                                                                   tCGTATtcaaatccactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgaa                                                                                                                                                                                        <  2:339437‑M1/94‑89 (MQ=255)
                                                                                                                                                                                                                                                   tCGTATtcaaatccactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataa                                                                                                                                                                                                             <  1:495336‑M1/73‑68 (MQ=255)
                                                                                                                                                                                                                                                   tCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAAt                                                                                                                                                                                                        >  1:641100/1‑78 (MQ=255)
                                                                                                                                                                                                                                                    cGTATtcaaatccactacctcgcaatgtcattgtatattcggcaccgttatctttaaggctgaaactgataagaaacttatccatggcgtgaacagtttcattttttgatgaaagcacctgataaccacttttatcaatctgagttgcgcaatgaaagaactccctcaaagttaacaggctatcataattcgaaatccaatcttttttcttaaatgcatgatggatgttgttaaaaaaattgtttgaatgtgtttttgtatactaagactttaca  >  1:624312‑M1/1‑5 (MQ=255)
                                                                                                                                                                                                                                                    cGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGAt                                                              >  1:178607/1‑215 (MQ=255)
                                                                                                                                                                                                                                                      tataCACAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGtt                                                                                                        <  1:534692/171‑1 (MQ=255)
                                                                                                                                                                                                                                                      tataCAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGAt                                                                                                                                                  <  1:187301/129‑1 (MQ=255)
                                                                                                                                                                                                                                                       ataCAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCAtt                                                                                                                                                                                                                                 <  1:57579/49‑1 (MQ=255)
                                                                                                                                                                                                                                                        taCAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGTAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACg                                                          <  2:178604/215‑1 (MQ=255)
                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                              
TGATTCTGCCATCCTGATTTCTCCCAACCTAAAAAGTTATAAATAAAAAGAGATTGTATTTAAAGTGCAAAAATTCAATTGCTAATAAGTTACATTTTAATAATGAGCGTTTTTTGATAGTTTACTTCTATAGTGAGATATTTAATGGCGACATAAAGTAACCAAATAAAATAAGGTTGTCATATGTTACCCAGGATCAGACACAATAATTTTATTGGTGCGGTGGAGTTATTTGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAGTTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCC  >  CP009273/4427341‑4427859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.