New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4427589	125 (3.250)	12 (0.330)	8/296	NT	11.1%	coding (66/939 nt)	ytfI	uncharacterized protein
	?	CP009273	= 4427843	75 (2.070)					coding (320/939 nt)	ytfI	uncharacterized protein

TGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAGCAAATTAAAACGGGGTAAATTTGAAC  >  CP009273/4427574‑4428079                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             tGTAAAGTCTTAGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCATTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacg                                                                                                                                                                                                                                         >  1:624312‑M2/1‑270 (MQ=255)                               aaaaaaTTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCGTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATaa                                                                                                                                                                                                                    <  1:397848/266‑1 (MQ=255)                                    aTTTTTTTAACAACATCCATCATGCATTTAAGCAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAACACATGAAACTGTTCACGCCATGTATAAGTTTCTTATCATTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTTGATTTGTatacgaagactttacaaataactccaccgcnccactagaa                                                                                                                                                                                                      <  2:270840‑M2/275‑41 (MQ=255)                                        ttttAACAAAATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATGATGATAGCCTGTTAACTTTGAGGGAG‑TTCGTTCGTTGCGCAACTCAGATTGATAAAAGTGGGTATCAGGTGCTTTCAGCAAAAAATGAAACTGTGCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGTatacgaagactttacaaataactccaccgcaccaata                                                                                                                                                                                                         >  1:270845‑M2/1‑231 (MQ=255)                                                           gCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGTTTTTGTatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaa                                                                                                                                                                               <  2:704445‑M2/275‑64 (MQ=255)                                                           gCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGTTTTTGTatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaa                                                                                                                                                                               <  2:166275‑M2/275‑64 (MQ=255)                                                                 aaGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGTTTTTGTatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgtgtaacatatg                                                                                                                                                                         >  1:704455‑M2/1‑206 (MQ=255)                                                                 aaGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGTTTTTGTatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaacatatg                                                                                                                                                                         >  1:166278‑M2/1‑206 (MQ=255)                                                                                 tttCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGa                                                                                                                                                                                                                                              <  1:41699/190‑1 (MQ=255)                                                                                 tttAGAATTTTTATATCCTTTTAACTTT‑CGGGAGTTTCTTTCTTTCCGCAACTCAGATTGATAAAAGTGTTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAACTATAACGATGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAATAACCGTGAATTTCCGTTAGAACAAAACAGa                                                                                                                                                         <  2:678394/275‑1 (MQ=255)                                                                                             gttgCCTGTTTAATTTGATGGAG‑TTTTTTTGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTAGATTTGGATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGcc                                                                                                                                             <  1:31292/272‑1 (MQ=255)                                                                                               aGCCTGTTTACGTTGAGGGAG‑TTCTTTCGTTGAGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCATTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTg                                                                                                                                           <  1:275501/275‑1 (MQ=255)                                                                                                     ttAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAAt                                                                                                                                                                                                                      >  2:191885/1‑194 (MQ=255)                                                                                                     ttAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAatat                                                                                                                                                                                                            >  1:666166/1‑204 (MQ=255)                                                                                                         cTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAAt                                                                                                                                                                                                                  <  1:191888/194‑1 (MQ=255)                                                                                                         cTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACt                                                                                                                                                                                                        <  2:666157/204‑1 (MQ=255)                                                                                                               gggAG‑TTATTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGCAACTGTTGACGACATGGGTAAGTTTCTTATCAGTTGCAGCATTAAAGATAACGGTGCGGAATATACAATGACATTGCGAGGGGGTGGAATTGAATACGAAGAAATACAAATAACAATAAATGAATATAAATCAATAAAGGAATTAAAAAACAGTGAATTACAGTTAGAACAAAACAAACGAATGTATGACTGGGATATTCTTCaacaa                                                                                                                           >  2:24262/1‑271 (MQ=255)                                                                                                                   g‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGtt                                                                                                                                                                      >  2:583948/1‑228 (MQ=255)                                                                                                                        tttCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGaa                                                                                                                                                                  <  1:583957/228‑1 (MQ=255)                                                                                                                                     cTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATa                                                                                                                                                                                                                           >  2:45618/1‑158 (MQ=255)                                                                                                                                         gATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACaa                                                                                                                                                                                                                       <  1:45618/158‑1 (MQ=255)                                                                                                                                               tAAAAGTGGTTATCAGGTGCTTTCATCAGAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAANAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAg                                                                                            >  1:535956/1‑275 (MQ=255)                                                                                                                                               tAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATAAAAg                                                                                            >  1:429279/1‑275 (MQ=255)                                                                                                                                                                 gCTTTCATCCCAAAATAAAACTGTTCACGCCATGGCTAAGTTTCTTATCAGTTTCAGCCTTAAAGATACCGGTGCCGAATATACAATGCCATTGCGAGGTACAGGATTTGAATACGAAGAAATACCCATAACACTAATTTCATATAACTCATTCATGGATTCCa                                                                                                                                                                                         >  2:382809/1‑164 (MQ=255)                                                                                                                                                                 gCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACaa                                                                                                                                                               >  2:278402/1‑190 (MQ=255)                                                                                                                                                                     tcatcaAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACa                                                                                                                                                           <  1:278407/190‑1 (MQ=255)                                                                                                                                                                     tcatcaAAAAATGAAACAGGTCACGCCATGGATAAGTTTCTTAACAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCaaaaa                                                                                                                                                                                     <  1:382815/164‑1 (MQ=255)                                                                                                                                                                       atcaAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATaa                                                                                                                                                                                                                    >  2:147096/1‑131 (MQ=255)                                                                                                                                                                         caAAAAATGAAAAANTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGAc                                                                  <  2:535948/275‑1 (MQ=255)                                                                                                                                                                           aaaaaTGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGa                                                                                                                                                                                                                <  1:147097/131‑1 (MQ=255)                                                                                                                                                                                     cTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaac                                                                                                                                                                              <  1:92611‑M2/155‑65 (MQ=255)                                                                                                                                                                                        ttCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacga                                                                                                                                                                                                                                        <  2:339437‑M2/94‑7 (MQ=255)                                                                                                                                                                                        ttCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATAc                                                                                                                                                                                                                                >  1:288941/1‑102 (MQ=255)                                                                                                                                                                                        ttCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATa                                                                                                                                                                                                                           >  2:936/1‑107 (MQ=255)                                                                                                                                                                                         tCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaacatat                                                                                                                                                                          >  2:92610‑M2/1‑87 (MQ=255)                                                                                                                                                                                            cGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACgaagaa                                                                                                                                                                                                                                    <  1:339443/94‑1 (MQ=255)                                                                                                                                                                                            cGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCAt                                                                                                                                                                                                                            <  2:288936/102‑1 (MQ=255)                                                                                                                                                                                            cGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACaa                                                                                                                                                                                                                       <  1:936/107‑1 (MQ=255)                                                                                                                                                                                              ccATGGATAAGTTTCTTATCAGTTTCAACCTTAAAGATAACGGTGACGAATATACAATGACATTGCGAGGTAGTGGATTTGACTACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCt                                                            <  1:398485/260‑1 (MQ=255)                                                                                                                                                                                                aTGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAACAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTCCAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGATATGCCTTAtt                                           >  1:148462/1‑275 (MQ=255)                                                                                                                                                                                                  ggATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATAc                                                                                                                                                                                                                                >  2:605423/1‑92 (MQ=255)                                                                                                                                                                                                      aaGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCAt                                                                                                                                                                                                                            <  1:605432/92‑1 (MQ=255)                                                                                                                                                                                                           tCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATAc                                                                                                                                                                                                                                >  1:559341/1‑83 (MQ=255)                                                                                                                                                                                                           tCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAAt                                                                                                                                                                                                                      >  1:628248/1‑93 (MQ=255)                                                                                                                                                                                                           tCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCAACAGGCGATTGGTGACGTGTCTTTAGGTTATTCATTATTGNTGGATACAg                                >  2:279427/1‑275 (MQ=255)                                                                                                                                                                                                             ttATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacga                                                                                                                                                                                                                                        <  1:495336‑M2/73‑7 (MQ=255)                                                                                                                                                                                                               attaGTTTCAGACTTAAAGATAACGGTGCCGAATATACAATGACATTGAGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAg                            <  1:279432/272‑1 (MQ=255)                                                                                                                                                                                                               aTCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCAt                                                                                                                                                                                                                            <  2:559332/83‑1 (MQ=255)                                                                                                                                                                                                               aTCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAAt                                                                                                                                                                                                                  <  2:628239/93‑1 (MQ=255)                                                                                                                                                                                                                 cAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACgaagaa                                                                                                                                                                                                                                    <  2:495329/73‑1 (MQ=255)                                                                                                                                                                                                                  aGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAat                                                                                                                                                                                                              >  2:241645/1‑94 (MQ=255)                                                                                                                                                                                                                   gTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGAtt                                                                                                >  1:181806/1‑203 (MQ=255)                                                                                                                                                                                                                      tCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATaa                                                                                                                                                                                                          <  1:241650/94‑1 (MQ=255)                                                                                                                                                                                                                         gCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAg                                                                                                                                                          >  1:107229/1‑139 (MQ=255)                                                                                                                                                                                                                             tAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGa                                                                                                                                                      <  2:107228/139‑1 (MQ=255)                                                                                                                                                                                                                              aaaGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATaaa                                                                                                                                                                                                                   >  2:722677/1‑77 (MQ=255)                                                                                                                                                                                                                              aaaGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTa                                             >  2:128419/1‑243 (MQ=255)                                                                                                                                                                                                                              aaaGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTa                                             <  1:128420/243‑1 (MQ=255)                                                                                                                                                                                                                                  aTAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGaa                                                                                                                                                                                                               <  1:722687/77‑1 (MQ=255)                                                                                                                                                                                                                                  aTAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGAtt                                                                                                                                                                                            >  1:92861/1‑96 (MQ=255)                                                                                                                                                                                                                                    aaCGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaac                                                                                                                                                                              <  2:147436‑M2/108‑65 (MQ=255)                                                                                                                                                                                                                                    aaCGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAat                                                                                                                                                                                                              >  2:17869/1‑76 (MQ=255)                                                                                                                                                                                                                                    aaCGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCAACAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAGCAAATTAAAACGGGGAAAAt        >  1:208714/1‑274 (MQ=255)                                                                                                                                                                                                                                      cGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCaa                                                                                                                                                                                        <  2:92860/96‑1 (MQ=255)                                                                                                                                                                                                                                      cGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAg                                >  2:102743/1‑248 (MQ=255)                                                                                                                                                                                                                                        gTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaacatat                                                                                                                                                                          >  1:147437‑M2/1‑40 (MQ=255)                                                                                                                                                                                                                                        gTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATaa                                                                                                                                                                                                          <  1:17869/76‑1 (MQ=255)                                                                                                                                                                                                                                         tGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATCGGTGACgtg                                                               >  2:680408/1‑214 (MQ=255)                                                                                                                                                                                                                                         tGCCGAATATACAATGACAATGCGAGGGAGAGGATTTGAAAACGAAGAAATACCCATAACAATAAATGAATATAACTGATTCATGGAATTAAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTAAGCGTGGGATATTATACAGAAAAAACAGGATGACATACCGAAAAGGATGAAAGGTAATAGTCACCAGGGGATTGGAGACGAGGATTTAGGTTATGACTTATTGGAGGAAAGAGGAAGCAAATTAAAAGGAGGAAAACGTGAAc  >  2:121256/1‑275 (MQ=255)                                                                                                                                                                                                                                          gCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAg                            <  1:102744/248‑1 (MQ=255)                                                                                                                                                                                                                                           ccGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTAATATTCACCAGGCGATTgg                                                                      >  2:41283/1‑205 (MQ=255)                                                                                                                                                                                                                                             gAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAATTGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACAGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCtt                                                           <  1:680417/214‑1 (MQ=255)                                                                                                                                                                                                                                              aaTATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACaaaa                                                                                                                                                             >  1:470659/1‑115 (MQ=255)                                                                                                                                                                                                                                               atatACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGAc                                                                  <  1:41283/205‑1 (MQ=255)                                                                                                                                                                                                                                                  taCAATGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaac                                                                                                                                                                              <  1:110546‑M2/94‑65 (MQ=255)                                                                                                                                                                                                                                                  taCAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGa                                                                                                                                                         <  2:470652/115‑1 (MQ=255)                                                                                                                                                                                                                                                   aCAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACaa                                                                                                                                                               >  2:673984/1‑108 (MQ=255)                                                                                                                                                                                                                                                      aTGACATTGCGAGGTAGTGGATTTGAatacgaagactttacaaataactccaccgcaccaataaaattattgtgtctgatcctgggtaacatat                                                                                                                                                                          >  2:110545‑M2/1‑26 (MQ=255)                                                                                                                                                                                                                                                      aTGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATaaa                                                                                                                                                                                                                   >  1:548803/1‑53 (MQ=255)                                                                                                                                                                                                                                                       tGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACa                                                                                                                                                                                                                        >  1:523656/1‑47 (MQ=255)                                                                                                                                                                                                                                                       tGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACa                                                                                                                                                           <  1:673993/108‑1 (MQ=255)                                                                                                                                                                                                                                                        gACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAAt                                                                                                                                                                                                                      >  2:375480/1‑48 (MQ=255)                                                                                                                                                                                                                                                          cATTGCGAGGTAGTGGATTTGAATACGAAGAAATAc                                                                                                                                                                                                                                >  2:372901/1‑36 (MQ=255)                                                                                                                                                                                                                                                          cATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGaa                                                                                                                                                                                                               <  2:548794/53‑1 (MQ=255)                                                                                                                                                                                                                                                          cATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACtcattc                                                                                                                                                                                                   >  1:360279/1‑65 (MQ=255)                                                                                                                                                                                                                                                          cATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGaaaaaa                                                                                                                        >  1:381087/1‑140 (MQ=255)                                                                                                                                                                                                                                                           aTTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATaa                                                                                                                                                                                                                    <  2:523649/47‑1 (MQ=255)                                                                                                                                                                                                                                                            ttGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAAt                                                                                                                                                                                                                  <  1:375486/48‑1 (MQ=255)                                                                                                                                                                                                                                                             tGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAAt                                                                                                                                                                                                                      >  2:354556/1‑43 (MQ=255)                                                                                                                                                                                                                                                             tGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTa                                                                                               >  1:590930/1‑162 (MQ=255)                                                                                                                                                                                                                                                              gCGAGGTAGTGGATTTGAATACGAAGAAATACCCAt                                                                                                                                                                                                                            <  1:372907/36‑1 (MQ=255)                                                                                                                                                                                                                                                              gCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATgg                                                                                                                                                                                               <  2:360273/65‑1 (MQ=255)                                                                                                                                                                                                                                                              gCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGt                                                                                                                    <  2:381081/140‑1 (MQ=255)                                                                                                                                                                                                                                                               cGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATAtt                                                                                                                                    >  2:54293/1‑123 (MQ=255)                                                                                                                                                                                                                                                                 aGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAAt                                                                                                                                                                                                                  <  1:354562/43‑1 (MQ=255)                                                                                                                                                                                                                                                                 aGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAgg                                                                                           <  2:590921/162‑1 (MQ=255)                                                                                                                                                                                                                                                                   gTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTAc                                                                                                                                <  1:54293/123‑1 (MQ=255)                                                                                                                                                                                                                                                                             tGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTgg                                                                      >  1:253755/1‑171 (MQ=255)                                                                                                                                                                                                                                                                              gAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCAc                                                                                 >  1:118257/1‑159 (MQ=255)                                                                                                                                                                                                                                                                              gAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCt                                               >  1:138619/1‑193 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                             TGTAAAGTCTTCGTATACAAAAACACATTCAAACAATTTTTTTAACAACATCCATCATGCATTTAAGAAAAAAGATTGGATTTCGAATTATGATAGCCTGTTAACTTTGAGGGAG‑TTCTTTCGTTGCGCAACTCAGATTGATAAAAGTGGTTATCAGGTGCTTTCATCAAAAAATGAAACTGTTCACGCCATGGATAAGTTTCTTATCAGTTTCAGCCTTAAAGATAACGGTGCCGAATATACAATGACATTGCGAGGTAGTGGATTTGAATACGAAGAAATACCCATAACAATAAATGAATATAACTCATTCATGGATTTCAAAAACCGTGAATTTCCGTTAGAACAAAACAGACGATTGTATGCCTGGGATATTCTACAGAAAAAACAGTCTGACATACCGAAAAGGATTAAAGGTTATATTCACCAGGCGATTGGTGACGTGTCTTTAGGTTATGCCTTATTGGAGGATATAGTAAGCAAATTAAAACGGGGTAAATTTGAAC  >  CP009273/4427574‑4428079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.