New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4433728 =	45 (1.170)	8 (0.220)	5/296	NT	17.5%	coding (1530/1734 nt)	tamA	translocation and assembly module for autotransporter export, outer membrane subunit
	?	CP009273	4434929 =	33 (0.910)					coding (1001/3780 nt)	tamB	translocation and assembly module for autotransporter export, inner membrane subunit

GGTTCAGATGTCGATTTCTCCGTTTTCCAGGCGCAGAACGTCTGGATCCGCACACTGTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCTTACTGTTGCT  >  CP009273/4433459‑4433984                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                 gtataatcgtcagATTTCTCCGTTTTCCAGGCGCAGTACGTCTGGATCCGCACACTGTACGATCGCCATCGTTTTGTTCCACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGANAAGGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGAc                                                                                                                                                                                                                                                                <  1:610768/260‑1 (MQ=255)                 tctgCGTTTTCCAGGCGCAGAACGTCTGGATCCGCACACTTTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTTCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcgc                                                                                                                                                                                                                                              <  1:620720/274‑1 (MQ=255)                                                      acTGTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACANAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGACAATGGTGGGGCGCGGTGttggagtagtc                                                                                                                                                                                                                               <  1:494801/252‑10 (MQ=255)                                                          tACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGAACTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATCCCAGTACAACGTGACCGGAAACTGGACGGGCGACGTGTTTGTCGCATGTGGCGAAGCGATAAGCGCTATTcgc                                                                                                                                                                                                      >  1:24734/1‑273 (MQ=255)                                                                    aTCGTTTTGTTACACGGGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGANCGCAGTATTCGTGGCTACATATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACttt                                                                                                                                                                                          <  1:550077/275‑1 (MQ=255)                                                                                  cgcgGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGACAGGGGCCTCGAAGTTGATAACCGGAGCCCTGGAATACCAGTACAACGTGCCCGGAAAAGGGTGGGGCGAGGTGTTTGTAGATAGTGGCGAAGCGGGAAGGGAGATGTGCGCGAGCGACTTTAAAAcggtgagagg                                                                                                                                                                            >  2:318714/1‑266 (MQ=255)                                                                                               gctggATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATATCCGGATCGCTGNAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCCGCGCCTTTAAAACCGGTACCGGGGTCGGCGTgcgc                                                                                                                                                               >  1:669676/1‑275 (MQ=255)                                                                                                    aTTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAATGTGCCTCGAAGTTAATAACCCGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAAACGGTAACGGGGTAGGCGTGCGCTggg                                                                                                                                                           >  1:222332/1‑274 (MQ=255)                                                                                                          ccctggtagacagACAAACTACCGCCTGGTTTGTGTTTGTTCGCCGGGGGAAGACGCAGTTGTCGTGGCTACAAATACAAAATTATGTCTCCGAAATACGCCCACGGTGACATGAAAGGGGCCTCTAAGTTTGTAACCGGATCGCTGGAATACCAGTACAACGGGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGc                                                                                                                                                     <  2:669667/262‑1 (MQ=255)                                                                                                            tgtaatcggtcattttgccggtaagtttcagtttcagatcatccgcctgatactgcttctcaccagtgaacggccagtaaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccggac                                                                                                                                                                                                                                                                <  2:599421‑M1/3‑1 (MQ=255)                                                                                                                atcggtcattttgccggtaagtttcagtttcagatcatccgcctgatactgcttctcaccagtgaacggccagtaaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccggaccgga                                                                                                                                                                                                                                                            >  1:599430‑M1/159‑165 (MQ=255)                                                                                                                          aaGGACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATAAAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGTCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCaaa                                                                                                                                    <  1:453759/275‑1 (MQ=255)                                                                                                                           aGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGGAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCaaa                                                                                                                                    >  1:341802/1‑274 (MQ=255)                                                                                                                                          gCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTGCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTggg                                                                                                                                                                                                                                                  >  2:581241/1‑149 (MQ=255)                                                                                                                                          gCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTcgccg                                                                                                                                                                                                    >  2:66178/1‑195 (MQ=255)                                                                                                                                           attttCTTCGGCGGGGGTGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACATCGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTAc                                                                                                                    <  1:39512/272‑1 (MQ=255)                                                                                                                                              ttcttcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTGCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcgc                                                                                                                                                                                                                                              <  1:581250/149‑1 (MQ=255)                                                                                                                                              ttcttcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGc                                                                                                                                                                                                <  1:66179/195‑1 (MQ=255)                                                                                                                                                        ggggCGACCGCAGTATTCGAGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCTATAGTGGCTaa                                                                                                                                                                                                                        >  1:574684/1‑161 (MQ=255)                                                                                                                                                            cgaacggtgTAATCGTGACTACAAATACAAATCTATCGCTCCGAAATACGCCATCAGTGACCTGAAAGGGTCCTCGAACTTGATAACCCGATCGCTGGAATACCAGTACAACGTGACCAGAATATGGTGGGGCGCAGTGTTTGTCGATTGTGGCGAAGCgg                                                                                                                                                                                                                    <  2:574675/153‑1 (MQ=255)                                                                                                                                                                        cccgtcttttaaatcccaacCTATCGCTCCGACATCCTCCAACGGTGACCTGAATGGGGCCTCGTAGTTGTTTCCCTGATCCCTGTATTCCTATTTCACCCTGCCCGGAATCTGGTGGGGCGCGGGTTTTGTCGATAGTCGCGAAGCGGTAATCTATCTTCTCCCCAGCGCCTTTAAGTCCTGTAACGGGGTCGGCGTTCGCTTGGAATCGCCGGTCGTGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAACACGAACACGGTTTa                                                                                       <  2:122469/264‑1 (MQ=255)                                                                                                                                                                             gtgaacggccagtaaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATtcgcct                                                                                                                                                                                                    <  1:556302‑M1/63‑2 (MQ=255)                                                                                                                                                                             gCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTggg                                                                                                                                                                                                                                                  >  1:54896/1‑114 (MQ=255)                                                                                                                                                                             gCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGc                                                                                                                                                                                                                           >  2:249456/1‑137 (MQ=255)                                                                                                                                                                             gCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAAc                                                                                                                                   >  1:213691/1‑225 (MQ=255)                                                                                                                                                                                 caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcgc                                                                                                                                                                                                                                              <  2:54896/114‑1 (MQ=255)                                                                                                                                                                                 caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAg                                                                                                                                                                                                                       <  1:249461/137‑1 (MQ=255)                                                                                                                                                                                 caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGa                                                                                                                               <  2:213687/225‑1 (MQ=255)                                                                                                                                                                                 acggccagtaaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGc                                                                                                                                                                                                >  2:556293‑M1/94‑160 (MQ=255)                                                                                                                                                                                     ccagtaaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccggac                                                                                                                                                                                                                                                                <  1:172684‑M1/3‑1 (MQ=255)                                                                                                                                                                                         taaagctgtttgctgttcacttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccggaccgga                                                                                                                                                                                                                                                            >  2:172681‑M1/86‑92 (MQ=255)                                                                                                                                                                                           tCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcgc                                                                                                                                                                                                                                              >  1:580081/1‑104 (MQ=255)                                                                                                                                                                                           tCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGAGTCGGCGTGCGCTGGGAATCGCAGGTCGGGCCAATCAACCTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTggg                                                                   >  1:439859/1‑275 (MQ=255)                                                                                                                                                                                              aTCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTACGCTGGCAATCACCGGGCGGGCCAATCAAACTCGATTTTGCCGTTCGGGTCGCTGATACAGACGAACACGGGATAAAGTTATACACCGGTATggtgta                                                                >  2:149362/1‑271 (MQ=255)                                                                                                                                                                                               tCGCTCCGAAATACGTCAACGGTGACCTTAAAGGGGACTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGNATCGCCGGTCGGGCCAATCCAACTCGATTTTGCCGTAACGGTCGCGGATAAAGACGAACACGGGTAAAAGGTTTAAAACGGTCTGGGGCCa                                                               >  1:511207/1‑275 (MQ=255)                                                                                                                                                                                               tCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGgtg                                                                                                                                                                                                                                          <  2:580072/104‑1 (MQ=255)                                                                                                                                                                                                    tctaaaTACGCCAACGGTGACCTGAAAGGGTCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGTAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAAtt                                                          <  1:685/272‑1 (MQ=255)                                                                                                                                                                                                            cttccacgttgagcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgga                                                                                                                                                                                                                                                                 >  2:45957‑M1/67‑68 (MQ=255)                                                                                                                                                                                                              cgaagggTGACCCCCAAGGGGCCTCCGAGTGGATAAACGCGTCGCGGGAATACCAGTACACCGTGCCCGTAAATTGTGTGGGCGCGGTGTTTGTCGATTGTGGCGAATCGTTAAGCGATATTCGCCGCAGCGACTTTAAAACCGTTACCGGGTTCGGCGTGCGCTGGGAAGCGCCGTTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGTGCCAGAATTATGAGTTTAt                                                <  2:511200/270‑1 (MQ=255)                                                                                                                                                                                                                       agcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTcgccg                                                                                                                                                                                                    <  1:307390‑M1/63‑1 (MQ=255)                                                                                                                                                                                                                       agcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGaaaaaaa                                       <  1:244704‑M1/220‑1 (MQ=255)                                                                                                                                                                                                                       agcggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCAGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGGTTATGGaaaaaaa                                       <  1:259278‑M1/220‑1 (MQ=255)                                                                                                                                                                                                                       aCCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTgg                                                                    >  1:70639/1‑246 (MQ=255)                                                                                                                                                                                                                         cggcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTcgccg                                                                                                                                                                                                    <  1:245056‑M1/63‑1 (MQ=255)                                                                                                                                                                                                                           gcaatccggcttccgccagtcgcgtctgggcgcgtaaatccatatccaccgGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGc                                                                                                                                                                                                >  2:307384‑M1/52‑118 (MQ=255)                                                                                                                                                                                                                           gAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGcc                                                                <  2:70638/246‑1 (MQ=255)                                                                                                                                                                                                                                 ggCCTCGAATTTGATAACCGGATCGCTGGAATACCAGTACAACGTGCCCGGAAAATGGTGGGGCGCGTTGTTTGTCGATAGTGGCGAAGCGNTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCgg                             <  1:530134/275‑1 (MQ=255)                                                                                                                                                                                                                                 ggCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTAc                                                                                      >  1:348377/1‑218 (MQ=255)                                                                                                                                                                                                                                 ggCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCg                                                                          >  1:64538/1‑230 (MQ=255)                                                                                                                                                                                                                                     tCGAAGTTGATAACCGGGTCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGtt                                                                                  <  2:348371/218‑1 (MQ=255)                                                                                                                                                                                                                                     tCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCt                                                                      <  2:64537/230‑1 (MQ=255)                                                                                                                                                                                                                                      cGAAGTTGATAACCGGATTGTGGGAATACCAGTACAACGTGCACGGAAAATGGGGGGGCGGGGTGTTTGTCGAGAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTgg                        <  1:149363/275‑1 (MQ=255)                                                                                                                                                                                                                                      cGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTgg                        <  1:338760/275‑1 (MQ=255)                                                                                                                                                                                                                                       cgcacagtcggggcagggcgcgtcaatcactgtccgccgGGCCGGAAAATGGTGGGGCGGGGTGTTTGTAGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTgg                        >  2:244699‑M1/40‑274 (MQ=255)                                                                                                                                                                                                                                             gATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGGTACAGGTTTACAACGGTCTGGGGCCAGAAGTATTAGGTTATTAACAAAAATGAGCCTCTGCTTTgttttttt                 >  2:338754/1‑270 (MQ=255)                                                                                                                                                                                                                                                     gATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAACACCGGTACCGGGGt                                                                                                                                                                         >  1:53097/1‑115 (MQ=255)                                                                                                                                                                                                                                                     gATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGAGGGGCGCGGTGTTTGTCGATAGTGGAGAAGCGGTAAGCGATATCCGACGCAGCGACTTTAAACCCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCCTACCGGTTGCGGGTAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGCATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCCTAc         >  1:163841/1‑275 (MQ=255)                                                                                                                                                                                                                                                         gCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGc                                                                                                                                                                     <  2:53097/115‑1 (MQ=255)                                                                                                                                                                                                                                                             gAATAGCAGTAAAACGTGATCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGGAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCTTACTGTTGCt  <  1:21711/274‑1 (MQ=255)                                                                                                                                                                                                                                                                           cGTGACCGGAAAATGGTGGTGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTAGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGgtt                      >  1:576044/1‑240 (MQ=255)                                                                                                                                                                                                                                                                           cGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGa                                                                                                                                                          >  1:486730/1‑108 (MQ=255)                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                 GGTTCAGATGTCGATTTCTCCGTTTTCCAGGCGCAGAACGTCTGGATCCGCACACTGTACGATCGCCATCGTTTTGTTACACGCGGCACGCTGGGCTGGATTGAAACCGGTGATTTCGACAAAGTACCGCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGATATTCGCCGCAGCGACTTTAAAACCGGTACCGGGGTCGGCGTGCGCTGGGAATCGCCGGTCGGGCCAATCAAACTCGATTTTGCCGTACCGGTCGCGGATAAAGACGAACACGGGTTACAGTTTTACATCGGTCTGGGGCCAGAATTATGAGTTTATGGAAAAAAATCAGCCTCGGCGTGGTTATCGTTATCTTACTGTTGCT  >  CP009273/4433459‑4433984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.