New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4433728 =45 (1.170)8 (0.220) 5/296 NT 17.5% coding (1530/1734 nt) tamA translocation and assembly module for autotransporter export, outer membrane subunit
?CP009273 4434929 = 33 (0.910)coding (1001/3780 nt) tamB translocation and assembly module for autotransporter export, inner membrane subunit

GCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGTCAATCTCG  >  CP009273/4434657‑4435183
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                              
gcgcGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAGGGTGAAAAAGTGAAGCTGAAAATGGGAGGCGCAATGCGCGAACAGCTGACGAATGGCGTTAATCTTtccggtccgg                                                                                                                                                                                                                                                              >  1:137738/1‑275 (MQ=255)
                         aCCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGGTAAACTTTCCGGTCCGGTGGATATGGATTTATGCGCCCCGa                                                                                                                                                                                                                                      >  2:169640/1‑274 (MQ=255)
                             tGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATAATAAAATGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGa                                                                                                                                                                                                                                 <  1:169643/275‑1 (MQ=255)
                                     ccacgccgaggctgatttttttccataaactcataattctggccccagaccgatgtaaaactgtaacccgtgttcgtctttatccgcgaccggtacggcaaaatcgagtttgattggcccgaccggcgattcccagcgcacgccgaccccggtaccggttttaaagtcgctgcggcgaatatcgcttaccgcttcgccactatctacaaacaccccgccccaccattttccggccCGGCGGACAGTGATTGACGCGCCCTGCCCCgactgtgcg                                                                                                                                                                                                                          >  2:244699‑M2/236‑270 (MQ=255)
                                     aTGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCgg                                                                                                                                                                                                                          >  1:15335/1‑274 (MQ=255)
                                         tgctgAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGTATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCTCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGc                                                                                                                                                                                                                      >  1:691907/1‑274 (MQ=255)
                                                aGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGGGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGCTTGACGCGCCCAGAGGCGCCTGGCTTGAGCGGGATTgg                                                                                                                                                                                                              >  2:596000/1‑274 (MQ=255)
                                                    tttttttccataacctcataattctggccccagaccgatgtaaaactgtaacccgtgttcgtctttatccgcgaccggtactgcaaaatcgagtttgattggcccgaccggcgattcccagcgcacgccgaccccggtaccggttttaaagtcgctgcggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCt                                                                                                                                                                                                          <  1:259278‑M2/55‑1 (MQ=255)
                                                    tttttttccataaactcataattctggccccagaccgatgtaaaactgtaacccgtgttcgtctttatccgcgaccggtacggcaaaatcgagtttgattggcccgaccggcgattcccagcgcacgccgaccccggtaccggttttaaagtcgctgcggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCt                                                                                                                                                                                                          <  1:244704‑M2/55‑1 (MQ=255)
                                                      ggtcatttccGGAAATACTAAACTGAACGCCCTGGATAGCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAAAAGTACACTGAACGTGGAGACGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGTCGCt                                                                                                                                                                                                          <  1:720241/264‑1 (MQ=255)
                                                                         aaaCTGGGCGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCAAGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCNCTCTCAACAGTACACTGAAAGTGGAGCAGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGCCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGGTTGCCGCTCAACGTGGAAGTGAACAGCa                                                                                                                                                                                      <  1:552296/274‑1 (MQ=255)
                                                                                    ccTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACt                                                                                                                                                                          >  1:153115/1‑275 (MQ=255)
                                                                                    ccTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGGGGAAGGGAACAGCAAACAGCTTTACt                                                                                                                                                                          >  1:286053/1‑275 (MQ=255)
                                                                                                     gTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACCTCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGCTATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGAGTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGGgag                                                                                                                                                         >  1:387397/1‑275 (MQ=255)
                                                                                                        aaGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCATACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAg                                                                                                                                                      <  1:426872/275‑1 (MQ=255)
                                                                                                               cGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACATCTTAACTGGCCGCTCACTGGTGAGAAGCAGAATc                                                                                                                                               >  1:314666/1‑275 (MQ=255)
                                                                                                                gTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGCTTTATGCGCCCAGACGCGACTGGAGGAAGCCGGATTGCCGCTCACCGTGGAAGTGAACAGCCAACAGCTTTACTGTCCGTTCACTGGTg                                                                                                                                                           >  1:369799/1‑262 (MQ=255)
                                                                                                                                      gacggTCAGACACCTGGCCGGTGGTCAACAACCACAAAAGTACACTGAACGGGGGGCCGTGGAAAGGTGAAAAAGGGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATctgaaactgaaa                                                                                                                        <  2:153112/271‑1 (MQ=255)
                                                                                                                                                               cATCACTCTCACCAGGCCGCTGGACGGGAGGGCGGTGAAGGGTGAAGAAGGGGAGCTGAGTATGGGCGGGGCGCTGCACGAATGGTTGGGGAGTGGCGGGAATCTTGCCGGTGCGGTGGGGAAGGGTTCACGCGGCCAGGCGCGGCTGGCGGAAGCCGGATTGCCGCGGAACGTGGAAGTGAACAGCAGACAGCTTGACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGCTCTGAAACTGAAACTGAACGGCAAAACGACCGATTacc                                                                                               <  2:314660/275‑2 (MQ=255)
                                                                                                                                                               cATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATANGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTaca                                                                                               <  1:596009/275‑1 (MQ=255)
                                                                                                                                                                     tctcAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAANCAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGAAAAATGACCGATTACACGctct                                                                                         >  1:523376/1‑275 (MQ=255)
                                                                                                                                                                              tACACTGAACGTGGATCCGTTGATAGGTGGAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTANTGGc                                                                                                                                                                       >  1:493566/1‑188 (MQ=255)
                                                                                                                                                                              tACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAAc                                                                                                                                                                                          >  2:140005/1‑169 (MQ=255)
                                                                                                                                                                                cacTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGACGCTCGACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCACTATGCgctg                                                                               >  1:639548/1‑271 (MQ=255)
                                                                                                                                                                                  cTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCa                                                                                                                                                                                      <  1:140006/169‑1 (MQ=255)
                                                                                                                                                                                  cTGAAAGTGGAGCCGGTGAAAGGTGAANAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAgg                                                                                                                                            <  1:540430/211‑1 (MQ=255)
                                                                                                                                                                                     aaCGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCCAACAGCTTTACTGGc                                                                                                                                                                       >  1:583941/1‑181 (MQ=255)
                                                                                                                                                                                         tGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGtt                                                                                                                                                                   <  2:583932/181‑1 (MQ=255)
                                                                                                                                                                                          ggAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGAt                                                                                                   >  1:396206/1‑244 (MQ=255)
                                                                                                                                                                                               cGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCa                                                                                                                                                    >  2:324633/1‑190 (MQ=255)
                                                                                                                                                                                                   gAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTAt                                                                                                                                                <  1:324639/190‑1 (MQ=255)
                                                                                                                                                                                                           aaaaaGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGACGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGt                                                                                                                                                                    >  1:344984/1‑162 (MQ=255)
                                                                                                                                                                                                             gctgcggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGc                                                                                                                                                                                                              >  2:307384‑M2/68‑118 (MQ=255)
                                                                                                                                                                                                             gctgcggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGt                                                                                                                                                                    >  2:556293‑M2/68‑160 (MQ=255)
                                                                                                                                                                                                               aGTGACACTGGAAATGGGCGCCGCTCTGCGCGAACAGCTGGAGATTGGCGTTAATCTCGCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGTAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCAc                                                                                                                                                                <  2:344978/162‑1 (MQ=255)
                                                                                                                                                                                                                 cggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCg                                                                                                                                                                                                            <  1:245056‑M2/53‑1 (MQ=255)
                                                                                                                                                                                                                 cggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCt                                                                                                                                                                                                          <  1:307390‑M2/55‑1 (MQ=255)
                                                                                                                                                                                                                 aggcgaatatcgcttaccgcttcgccactatcgacaaacaccgcgccccaccattttccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCAc                                                                                                                                                                <  1:556302‑M2/97‑1 (MQ=255)
                                                                                                                                                                                                                                  ggcgGGCTGCGCGAACAGCTGGAGATTGGCGTTGATCTTTCCGGTCCGGTGGATATGGATTTACGCGACCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAANAGCAAACAGCGTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCaa                            <  1:649619/275‑1 (MQ=255)
                                                                                                                                                                                                                                         tGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTgg                                                                                                                                                                                                  >  1:261022/1‑102 (MQ=255)
                                                                                                                                                                                                                                             cgAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGt                                                                                                                                                                                              <  2:261017/102‑1 (MQ=255)
                                                                                                                                                                                                                                                            tGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGTCAATCTCg  >  1:291182/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                  tAATCTTTCCGGTCCGGTGGATATGGATTTACGCGACCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGACACTTACCGGCAAAATGACCGATTACACg                                                                                             <  1:519389/178‑1 (MQ=255)
                                                                                                                                                                                                                                                                         tccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTa                                                                                                                                                                            >  2:172681‑M2/8‑92 (MQ=255)
                                                                                                                                                                                                                                                                         tccggtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGAt                                                                                                   >  1:599430‑M2/8‑165 (MQ=255)
                                                                                                                                                                                                                                                                             gtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTgg                                                                                                                                                                        <  1:172684‑M2/89‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gtcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTaca                                                                                               <  2:599421‑M2/162‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tcCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAg                                                                                                                                                                                               >  2:45957‑M2/3‑68 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                              
GCGCGTGACGGGCGACACGGACATCACCGTGAGCACCATGCTGCTGAAAGTGAGCAGCATTGACGGCAATACTAAACTGGACGCCCTGGATATCGATTCCAGTCAAGGGATCGTCAACGCCAGCGGCACGGCGCAGCTGTCAGACAACTGGCCGGTGGACATCACTCTCAACAGTACACTGAACGTGGAGCCGTTGAAAGGTGAAAAAGTGAAGCTGAAAATGGGCGGCGCGCTGCGCGAACAGCTGGAGATTGGCGTTAATCTTTCCGGTCCGGTGGATATGGATTTACGCGCCCAGACGCGACTGGCGGAAGCCGGATTGCCGCTCAACGTGGAAGTGAACAGCAAACAGCTTTACTGGCCGTTCACTGGTGAGAAGCAGTATCAGGCGGATGATCTGAAACTGAAACTTACCGGCAAAATGACCGATTACACGCTCTCTATGCGTACGGCAGTGAAGGGACAGGAGATCCCGCCCGCGACTATTACCCTCGACGCCAAAGGTAATGAACAGCAGGTCAATCTCG  >  CP009273/4434657‑4435183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.