| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4519391 | 74 (1.930) | 4 (0.110) | 4/294 | NT | 5.7% | coding (670/1314 nt) | sgcC | putative PTS system EIIC permease component |
| ? | CP009273 | = 4519682 | 63 (1.750) | coding (379/1314 nt) | sgcC | putative PTS system EIIC permease component | |||||
ACATAATGGGTATCAGTAGCAGACCGACAGCAATGGTGGTTGGATGCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAG > CP009273/4519121‑4519661 | aCATAATGGGTATCAGTAGCAGACCGACAGCAATGGTGGTTGGATGCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAAACCGAGCACTACGCCGATa > 1:34339/1‑275 (MQ=255) aCCGACAGCAATGGTGGTTGGATGCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGAACGCCGACCATGc > 1:92776/1‑275 (MQ=255) cGACAGCAATGGTGGTTGGATGCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAAGCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCaacac > 1:264538/1‑270 (MQ=255) gCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAACCATCAGACCGCGCACTACGCCGATAATCACCGGATCGCCGACCATGACGTAACGGTTCTGGactgcct > 1:150122/1‑267 (MQ=255) ccccAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGTCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAg < 1:386665/275‑1 (MQ=255) tATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCCACATTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCCCCGGATCGCCGACCATGCCGAAGCGTGCCGGGATCTCCTGATCACCCATTTTTCTTccc > 2:588793/1‑275 (MQ=255) tATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAAACCGAGCACTACGCCCATAATCACCGGATCGCCAACCCTGCCTTAGCGTGCCTGGATCTCCCGAGCATCGCTATTGAGTccc > 2:707500/1‑275 (MQ=255) aCCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCCCCAGCCGCCAGGCCAAAAATCAGACCGAGCACTCCACCGATAATCACCGGATCGCCGCCCACGCCGCAGCGTTTCTGTATCTCCTGAGCCCCGACATTgttccccctcctta > 2:350238/1‑262 (MQ=255) aCCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGa > 1:105062/1‑275 (MQ=255) tataCACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTCACGCCTTCACCAGCAGCCCGGCCAAAAATCACACNGAGCCCTACGCCGATACTCACCGGATCGCCCACCATGCCGTAGCGTTTCTGGATATCCTGAGCCTCGCTATTGCGTCCCTTCAtcacccg > 1:559598/1‑268 (MQ=255) tataCACTTCACGTCATTTGAAATATTTATGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCACTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACNGAGCACTACGCCGATAAGCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGCACTCCTGAGCATCGATAATATGGCCCTTCATGAAAgc > 1:511863/1‑273 (MQ=255) taCACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGAt < 1:280020/236‑1 (MQ=255) ttCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACTAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATGACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGAAATTGCGTCCCTTCATGAAAGGGAtttttt > 1:681608/1‑275 (MQ=255) ttCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCattacgggtacgttggtccagcttatgaccggtagcctgatttatggtgtgctgggggcaatctgccatgcggcgctatcgttaa > 1:228387‑M1/1‑189 (MQ=255) cACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGGGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCTCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCACCGACCATGCCGTACCGTTTCTTTATCCCCCGAGCCTCAATATTTGCTCCCTTccttgaacatctta > 2:377960/1‑257 (MQ=255) tCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACNCCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGTGTCCCTCCATGAAAGGGATTTTTTCataga < 1:509583/275‑1 (MQ=255) ccggttGAAAGATCTCTGGAAGAACTTTCTTGCACCGCCGGAGATGGGCAGCAGGCCCGCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCataga < 2:33677/271‑1 (MQ=255) ccTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCataga < 1:350244/274‑1 (MQ=255) ccTCTGAAATACTGACGGAGGAACTTTCTTGAACCGGCGAGGATGGGCAGAAGGCCCTAAACAATCAGACGGATCATGCGCGAGAACAACACCAGGATTGCCGAAACGGTAAGCATCAGACTGGCGGAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCataga < 2:627828/274‑1 (MQ=255) cTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACNCCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCTACCCTTCATGAAAAGGATTTTTTCataga < 1:487976/273‑1 (MQ=255) ttGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAACATCAGACCGAGCACTACGACGATAATCACCGGATAGCGCACCCTGCCGTCGCGGTTCCGGAACCCCTGAGCAGCGATAGAGCGGCCCTCCCTGAAAGGGAGCATTTCatatctc > 2:509576/1‑269 (MQ=255) ttGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGCATCGCCGACCATGCCGTAGCGTCTCTGGATATCCTGCGCATCGATCTTGCGTCCCTCCTTGAAAGGGGTATTTTCatctatc > 2:487969/1‑268 (MQ=255) tGAAATATTTGTTGAAGAATTTTCTTGCACCGTCGGAGATGAGCAGCAGTCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATNATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCACCCCTCGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTTAGCATCGATATTGCGTCCCGCCATCAAAGGGATCTTTTCATAGATAGCa < 1:495068/275‑1 (MQ=255) ggAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCCGGATTTCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCCTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACg < 2:710012/275‑1 (MQ=255) ggAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATNGCCGCAACNGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAGAGGGATTGTTTCATAGATAGCATCAAGTAGAACg < 1:468404/275‑1 (MQ=255) aCTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGaaaaac > 1:586119/1‑273 (MQ=255) gccgcgtagaTGGGCAGCCGGCCCCCAACAATCAGGCGGATCATGCGCGTGAACAACACCATGCTTGCCGCAACGGTAATCATCAGGCTGGCGCAACCTTTACAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACt < 2:34339/268‑1 (MQ=255) tCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGAAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGACGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCAGTAGCGTTTCTGGACCTCCTGATCATCGATAtt > 1:693256/1‑206 (MQ=255) agaTGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAATCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCg < 1:377966/275‑1 (MQ=255) agcggactctacacaaTCAGGCGGCTCATGCGCGGGAACAACACCCTGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTTAAGCCTTCACCAGCCGCCAGGCCAAAACTCAGCCCGAGCCCTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTg < 2:92775/263‑1 (MQ=255) cagGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAgg > 2:323653/1‑210 (MQ=255) cccTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGAtt < 1:323659/210‑1 (MQ=255) aacaaTCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGAt < 2:525054/126‑1 (MQ=255) ggCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAATCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCg < 1:401739/248‑1 (MQ=255) ggCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGAGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTc > 1:629734/1‑274 (MQ=255) gaagacgcgccggaaaAACCCCATCATGGCCCCAACGGTAATCACCAGACGGGCCCAACCTTGAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCattacgggtacggttgtccagcttatgtccggtagcctgatttatggtgtgctgggggcaatctgccatgcggcgctatcgttaaaaatggccgactggacggcaaaacgggtacagaacatcgtcgggctggaaggtatttcgataccgcaaggctacggttc < 2:228382‑M1/269‑165 (MQ=255) tGCGCGGTAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCGTTAAAGCCTTCACCAGCCGCCAGGCCAAAAAGCAGNCCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCcgacg < 1:540429/275‑1 (MQ=255) ggAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGcc > 2:211884/1‑127 (MQ=255) caacaCCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCAAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAg < 1:211888/127‑1 (MQ=255) aTGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTACAGCCTTCACGAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGACCGCAGACCATGc > 1:611317/1‑115 (MQ=255) aTGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCt > 2:596029/1‑127 (MQ=255) tGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGc > 1:195493/1‑150 (MQ=255) ttGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGAt < 1:596038/127‑1 (MQ=255) ttGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAgg > 1:484127/1‑163 (MQ=255) tcgCCGCAACGGTAGTAACCAGACCGGCACAACCGTTAAAGCCTTCCCCTGCCGCCCGGCCAAAAAGCAGTCCGAGCGCTACGCAGTGTATCACCGGATCGCCGACCATGCCGtc < 2:611308/113‑2 (MQ=255) tGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTcc < 2:195490/150‑1 (MQ=255) ccGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGCTCTCCTGACCATCGATCTTGCGTCCCTTCATGACAgg > 2:544011/1‑160 (MQ=255) ccGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGTACTGGAACCGTAGCCTTTCGGGATCGAACTAACTTCCAGCCCGACGAAGTTCTGTACCCGTTTTGCCGTc > 2:672378/1‑275 (MQ=255) cGCAACGGTACTCATCACACTGGCGCAACCTTTAAAGCCTTCACCATCCGCCAGGCCAAACATCAGTCCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGAtt < 2:484120/163‑1 (MQ=255) aaCGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGAtt < 1:544020/160‑1 (MQ=255) cGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTTCGGTATCGAAATACCTTCCAGCCCGACAATGTTCTGTACCCGGTTTGCCGTCCAGTCg > 1:459306/1‑275 (MQ=255) ttcatcaGACTGGCGCAACCTTTAATGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCNGATCGCCGNCCATGCCGTAGCCTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCa < 1:478181/273‑1 (MQ=255) atcatcAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCt > 1:614491/1‑118 (MQ=255) tcaGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGc < 2:614482/118‑1 (MQ=255) gcgcAACCTTTAAAGCGTTCACCAGCCGGCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGa > 1:527835/1‑169 (MQ=255) gcgcAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGCCGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACAAt > 1:719807/1‑273 (MQ=255) cgcAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAg < 1:419993/274‑1 (MQ=255) cgcAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCANGCCGTAGCNTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAg < 1:476345/274‑1 (MQ=255) aggagcaattAACGCCTTCACCAGCCTCCACGCCAAAAATCAGACCGAGCACTACGCCGATAATCCCCGGATCGCCGACCATGCCGTAGCGTTGCTGGCTCTCCTGAGCAGCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAg < 2:105061/266‑1 (MQ=255) aaCCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAg < 2:527827/169‑1 (MQ=255) aaaGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTTGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATg < 1:707510/273‑1 (MQ=255) cTTCACCAGCCGCCCGGCCAAAAATCAGACCGAGCACTACGCCGATAATAACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGGTCTTGCGTCCATTCATGAAAGGGATTCTTTCATAGGTGGCATGAAGTAGAACGAAGAGCTGAACTTAACTTGAACCCTAGTCACGCGGTCTCGGCATACCTTCCAGCACGACGATGTCGTGGACCCGCTTTGCCCACCAGGCGGCCATGTTTCACGTGTGCGCCCGATGGCCGAtt > 2:328595/1‑275 (MQ=255) cTTCACCAGCCGCCATGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCGGACCATGCCGTAGCGGTTCTGGATCTCCTGAGCATCGAGATTGCGTCCCTTCATGAAAGGGATGTTTTCAAAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGACATTTTTAACGATAGCGCCGCATGGCAGAtt < 1:328601/275‑1 (MQ=255) cTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCattacgggtacggtggtccagcttatgaccggtagcctgatttatggtgtgc > 1:57165‑M1/1‑43 (MQ=255) cTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGAtt < 1:588802/275‑1 (MQ=255) tCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCa > 1:207798/1‑93 (MQ=255) tCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATATCGCCGCATGGCAGATTGc > 1:193999/1‑275 (MQ=255) aCCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCattacgggtacggtggtccagcttatgaccggtagcctgatttatggtgtgctggg < 2:57165‑M1/95‑57 (MQ=255) cAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGa < 2:207794/93‑1 (MQ=255) cgccAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAgg > 2:108050/1‑111 (MQ=255) acgagggggagaaaTCAGCCCGATGCCGACGCCCATAAGCACCGGTTCGCCGACCATGTCGTATGATGTCTCTATCTCCTGAGCAGAGATCTTGCATCCCGTAATGCAACAGAGTTTTTCATAGATAGCATCGAGTAGAAAGAAAAGCGGTAGTGAACTGGAACAGTAGCCTTGCGGTATCGAAATACCTTCCAGTCCGACGATGGTCTGTACCCGTTTAGCCGTCCAGTCGGCCAGTTTTAACGATAGCGTCGCGTGGCAGAGTGCACTCAgga < 2:85215/264‑3 (MQ=255) aGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGAtt < 1:108051/111‑1 (MQ=255) aGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGccc > 2:99470/1‑182 (MQ=255) cGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCcgacg < 1:99471/182‑1 (MQ=255) gAGCATTTCTCCGATAATCACCTGTTCGCCTACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCTTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTATAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTAc < 1:72432/272‑1 (MQ=255) aGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCatagatag > 2:365573/1‑106 (MQ=255) aGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCatagatag > 1:53281/1‑106 (MQ=255) aaCTACACAGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCa < 2:193996/274‑1 (MQ=255) aCTACGCCattacgggtacggtggtccagcttatgaccggtagcctgatttatggtgtgctgggggcaatctgccatgcggcgctatcgttaaaaatggccgactggacggcaaaacg > 2:650003‑M1/1‑8 (MQ=255) cTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATc < 2:53281/106‑1 (MQ=255) cTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATc < 1:365579/106‑1 (MQ=255) tgCCGATAATCACCGGATCGCCGACCATGTCGTAGCGTTTCTGGTTATCCTGAGCATTGATATTGCGTCCCTTCACGAAAGGGATTTTTTCATTGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGTAACATTCGCCTTTCGCTATCGCAACACCTTCCATCCCGACGATGTTCTGTACCCGTTTTGCCGTCCATCCGGCCATTTTTAACGATAGCGCCGCCTGGCAGATTGCCCCCAGCAAACCATAAATAAGGCGACCGGCCCTAAg > 2:184746/2‑274 (MQ=255) cGCCattacgggtacggtggtccagcttatgaccggtagcctgatttatggtgtgctgggggcaatctgccatgcggcgctatcgttaaaaatggccgactggacggcaaaacgggtacagaacatcgtcgggctggaaggtatttcgataccgcaaggctacggtt > 2:653729‑M1/1‑4 (MQ=255) cGCCattacgggtacggtggtccagcttatgaccggtagcctgatttatggtgtgctgggggcaatctgccatgcggcgctatcgttaaaaatggccgactggacggcaaaacgggta < 1:650012‑M1/118‑115 (MQ=255) cGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTg > 1:361824/1‑123 (MQ=255) | ACATAATGGGTATCAGTAGCAGACCGACAGCAATGGTGGTTGGATGCCCCAGCGTCACAGCAGTATCCAGACCGATATACACTTCACGTCCTTTGAAATATTTCTGGAAGAACTTTCTTGCACCGTCGGAGATGGGCAGCAGGCCCTCAACAATCAGGCGGATCATGCGCGGGAACAACACCATGATTGCCGCAACGGTAATCATCAGACTGGCGCAACCTTTAAAGCCTTCACCAGCCGCCAGGCCAAAAATCAGACCGAGCACTACGCCGATAATCACCGGATCGCCGACCATGCCGTAGCGTTTCTGGATCTCCTGAGCATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAG > CP009273/4519121‑4519661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |