New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4519391	74 (1.930)	4 (0.110)	4/294	NT	5.7%	coding (670/1314 nt)	sgcC	putative PTS system EIIC permease component
	?	CP009273	= 4519682	63 (1.750)					coding (379/1314 nt)	sgcC	putative PTS system EIIC permease component

ATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTA  >  CP009273/4519443‑4519951                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                               aTCTATATTNCGCCCCTTTACTAAAGGGATTTTTTCATAGATATCATCAAGTAGAACGAAAAGCGTTACTGAGCTGGAACCGTAGCCTTGCGGTATCGAAATTCCTTCCAGCACGACGATGTTCTGTACTCGTTTTGCCGTCCAGTCGGCCATTCTTCACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCa                                                                                                                                                                                                                                             <  2:264533/275‑1 (MQ=255)        tttcGTCCCTTCATGAAAGGGATTTTTTCATAGATAGAATCAATTTGAACGAACAGCGGTACTGAACTGGAACCGTAGCCTTNCGGTATCGNAATACCTTCCACACCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGCGCCAGTATTTGTAAATATCGACGTTCATCGtttt                                                                                                                                                                                                                                      <  1:483418/272‑1 (MQ=255)             tCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAACGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGGAAATAACGACGTTCCTCGTTTTGGTc                                                                                                                                                                                                                                  >  1:627634/1‑274 (MQ=255)             tCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGACGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCa                                                                                                                                                                                                                                 >  1:319193/1‑275 (MQ=255)                cTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAAATGTAAATATCGACGTTCATCGTTTTTGTCAGAc                                                                                                                                                                                                                              >  1:262114/1‑275 (MQ=255)                           ggATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCCGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCTACATGCCAGTAATTGTAAAAATCGACGGTACTCGTTTTGGTCAGACggtgggcaatc                                                                                                                                                                                                                   >  2:312880/1‑266 (MQ=255)                                      tagatagCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACATTCCAGCCCGACGATGTTATGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCACCGCATGGCAGATTTCCCCCAGCACACCCTAAATCAGGTTACCGGTCATCAGCTGGACCACCGTAACCGTAATTTCGTCGTGCCAATAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGAGTGACCAACATgacaaaat                                                                                                                                                                                                         >  1:94268/1‑267 (MQ=255)                                              aTCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGCCGGGTGACCAGCATGGCGANATTGagaagac                                                                                                                                                                                                >  2:55524/1‑274 (MQ=255)                                                  aGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGTCTTGCGGTATCGACATACATTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCCTTTTTAACGATAGCGCCGCATGGCAGATGGCCCCCAGCACACAATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGCCATTGTAAATAACGACGTTAATCGTTTGGGTCAGACGGGTGACCAGCCGGGCGAACTTgagcggacacat                                                                                                                                                                                            >  2:120194/1‑266 (MQ=255)                                                  aGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCAAGCACACCATAAATCATGCTACCGGTTATAAGCTGGACCACCGTACCCGTAATGGCGTAGTTCCAGTAACTGTAAATATCGACGTTCATCGATCTGGTAAGACGGGTGACCAGCATGGCGACATAGAGAAGAAAAAt                                                                                                                                                                                            >  1:285425/1‑275 (MQ=255)                                                   gTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCAAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCAAACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTCGTGCCAGTAATTGTAAATATCGACGGTCATCGTTTTGGTCAGACGGGGGGCCAGCAGGGCGAGATTGGGCAGCACAATa                                                                                                                                                                                           >  2:619005/1‑275 (MQ=255)                                                      gAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGNAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACt                                                                                                                                                                                        <  1:619014/275‑1 (MQ=255)                                                       aaCGAAAAGCGGTACGGAACGGGAACCGTAGCCTTTCGGTATCGAAATACCTTCCAGCCCGACGACGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCAAACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATaa                                                                                                                                                                                          <  2:319187/272‑1 (MQ=255)                                                                        aaCTGGAACCGTAGCCTTGCGTGATCGAAATACCTTCCAGCCCTACGTTGTTCTGTACCCGTTTGGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCAGCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCa                                                                                                                                                                      <  1:120195/275‑1 (MQ=255)                                                                          cTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAAt                                                                                                                                                                                                                                                                                >  1:653738/1‑167 (MQ=255)                                                                             gAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGACATAAGCTGGACAACCGTACCCGTAATggcgtagtgctcggtctgatttttggcctggcggctggtgaaggctttcaaggttgggcccgtctggtgattaccgttggggccatgatggggtttttccggcgcgtcttc                                                                                                                                                                 <  2:228382‑M2/275‑112 (MQ=255)                                                                              aaCCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATggcg                                                                                                                                                                                                                                                                            >  2:653729‑M2/1‑163 (MQ=255)                                                                               aCCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCt                                                                                                                                                                <  1:312886/274‑1 (MQ=255)                                                                                                ttgAAATACTTTCCAGCCCGACGATTTTCTGTACCAGTTTGGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACACGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCg                                                                                                                                              <  1:184749/273‑1 (MQ=255)                                                                                                                        ggtttggTACCCGTGTTGCCGTCCAGTCGCCCATTTTTAACCAGAGGGCCGCATGGCAGATGGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGAAATTGAGAATAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCACCGCCGGAGGCAGGGCCTGCGCCAACGTCa                                                                                                                      <  2:235402/269‑1 (MQ=255)                                                                                                                           tCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATGAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTaa                                                                                                                                                                                                                                                                >  1:596871/1‑134 (MQ=255)                                                                                                                               tACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATGAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGt                                                                                                                                                                                                                                                            <  2:596862/134‑1 (MQ=255)                                                                                                                               tACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATggcg                                                                                                                                                                                                                                                                            <  1:650012‑M2/118‑5 (MQ=255)                                                                                                                                   cGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATggcgtagt                                                                                                                                                                                                                                                                        >  2:650003‑M2/1‑110 (MQ=255)                                                                                                                                    gTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGc                                                                                                                                                                                                                   >  2:320141/1‑170 (MQ=255)                                                                                                                                    gTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACACCGGAGGCAGGGCCTGCGCCAAc                                                                                                                          >  1:235407/1‑259 (MQ=255)                                                                                                                                       ttGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACAtt                                                                                                                                                                                                        >  2:204496/1‑178 (MQ=255)                                                                                                                                        tGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAATCTGGACCACCGTACCCGTGATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACTGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATa                                                                                                                                                                                  <  1:85551/199‑1 (MQ=255)                                                                                                                                        tGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATgg                                                                                                                                                                                                               <  1:320147/170‑1 (MQ=255)                                                                                                                                         gCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACAAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATCCAGGCCTa                                                                                                      >  2:241647/1‑274 (MQ=255)                                                                                                                                           cGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTgaga                                                                                                                                                                                                    <  1:204500/178‑1 (MQ=255)                                                                                                                                              ccAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACg                                                                                                                                                                                                                                                 >  1:49320/1‑130 (MQ=255)                                                                                                                                              ccAGGCGGCCATTTTTACCGTGATCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGa                                                                                                <  1:55524/275‑1 (MQ=255)                                                                                                                                                  tCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCa                                                                                                                                                                                                                                             <  2:49320/130‑1 (MQ=255)                                                                                                                                                         tttttACCTATACAGCCGAAGGGCCGCGTGCCCCCACCACACCATAACTCAGTCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGGGCCAGTAATTGTAAATAGCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatc                                                                                     <  2:629725/275‑1 (MQ=255)                                                                                                                                                         tgttgaaCGATAGCGCCGCATGGCAGATTGCCCCCAGCACAGCATGAAGCAGGCGACCGGTAATAAGTTGGACCACCTTACCCGTAATGGCGTAGGGCCAGTAATTGTAAATATCGACGTGCATCGTTTTGGTCAGACGGGTGAGCAGCAGGGCGACATTGAGAAGAAAAATAACTGGGATAATCCTGGCGCCAAGGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatc                                                                                     <  2:719797/270‑1 (MQ=255)                                                                                                                                                            ttAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCAACGTACCCGTAATggcgtagtgctcggtctgatttttggcctggcggctggtgaaggctttaaaggttgcgccagtctgatgattaccgttgcggcaatcatggtgttgttcccgcgcatgatccgcctgattgttgagggcctgctgcccatctccgacggtgcaagaaagttcttccagaaatatttcaaaggacgtgaa                                                                                   >  1:228387‑M2/1‑85 (MQ=255)                                                                                                                                                             tAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAAtcatca                                                                                 <  1:427589/275‑1 (MQ=255)                                                                                                                                                               aaggttgcgcCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACt                                                                               <  1:345797/269‑1 (MQ=255)                                                                                                                                                                cGAGAGCACAGCAGGGAAGATTGCCCCCGTCACAACAGAGCTCAAGCTACCGGACTGACGCTTGGCGACAGTTCGCGTAATGGAGTAGTGCCACTAATCGGAAATATTGACGGGCAGCGTTTTGGTCAGACGGGCGACCAGCATGGCGACATTGAGAAGAAAAATAGCTGGGATAGTCATGGCGCCAATGGCTGTCGCATAACCAACGCCTGAGGCAGGGCATGAGCCAACGTCAAAGACATGCAGTGCTAGGCCGTAACTCTCCATCATCACt                                                                               <  2:285420/274‑1 (MQ=255)                                                                                                                                                                 gATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACttt                                                                             <  1:340594/275‑1 (MQ=255)                                                                                                                                                                                         cccAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATggcgtagtgctcggtctgatttttggcctggcggctggt                                                                                                                                                                                                                                         <  2:57165‑M2/95‑40 (MQ=255)                                                                                                                                                                                            aGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATa                                                                                                                                                        >  1:49933/1‑173 (MQ=255)                                                                                                                                                                                             gCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATggcgtagtgctcggtctgatttttggcctggcggctggtgaag                                                                                                                                                                                                                                     >  1:57165‑M2/1‑52 (MQ=255)                                                                                                                                                                                             gCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAatat                                                                                                                                                                                                                                                      >  1:94100/1‑78 (MQ=255)                                                                                                                                                                                                cacCATAAATCATGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCa                                                                                                                                                    <  2:49933/173‑1 (MQ=255)                                                                                                                                                                                                 acCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGAc                                                                                                                                                                                                                                                  <  2:94099/78‑1 (MQ=255)                                                                                                                                                                                                   gaaaaaaccggCTACCTGTGATAAGCTGGGACACCGTACGCCTGATGTGGTTGTTCCAGTAATTTTAAATGTCGAAGTTCATCGGTTTGGGCAGACGGGTGACACGCATGGCGACATTGAGAAGAAAAATAACTGGGATAGTCAGGGCGCCAATGGCTGTCGCATAACAAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACg                                           <  2:681599/266‑1 (MQ=255)                                                                                                                                                                                                      aaaTCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGACAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTAAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑Tc                                       >  1:233162/1‑275 (MQ=255)                                                                                                                                                                                                        aTCCGGCTGCCGGTCATAAGCTGGACCACCTTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCAc                                     <  1:456849/275‑1 (MQ=255)                                                                                                                                                                                                        aTCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCAACACTTTGATAGAGGGAATGAGGGTGTCGATCGCCATGACGagaa                                       >  2:640415/1‑271 (MQ=255)                                                                                                                                                                                                        aTCAGGATACCTGTCATAAGCTGGACCACCGTACCCGTAAGGGCGGAGTGCCAGTAATTGTAAATATCGACGTTCATCTGTTTGGTCAGACGGGTGACCAGCATGGCGACATGGAGAAGAAAAATAACTGGGATAACCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCAACACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCAc                                     <  1:697648/275‑1 (MQ=255)                                                                                                                                                                                                             gCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCg                                                                                                                                                                                                                                          >  1:635649/1‑74 (MQ=255)                                                                                                                                                                                                             gCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTc                                >  1:105390/1‑275 (MQ=255)                                                                                                                                                                                                             gCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTc                                >  1:438779/1‑275 (MQ=255)                                                                                                                                                                                                             gCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTc                                >  1:277475/1‑275 (MQ=255)                                                                                                                                                                                                                 ccGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGtttt                                                                                                                                                                                                                                      <  2:635640/74‑1 (MQ=255)                                                                                                                                                                                                                               gACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCAt                                                                                                                                                         >  1:649411/1‑137 (MQ=255)                                                                                                                                                                                                                               gACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTg                                                                                                                                 >  2:598032/1‑161 (MQ=255)                                                                                                                                                                                                                               gACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGa                                                                                                >  1:646752/1‑194 (MQ=255)                                                                                                                                                                                                                               gACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGACAAAACCa               >  2:153886/1‑274 (MQ=255)                                                                                                                                                                                                                                   accGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAAcc                                                                                                                                                     <  2:649402/137‑1 (MQ=255)                                                                                                                                                                                                                                   accGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGcc                                                                                                                             <  1:598041/161‑1 (MQ=255)                                                                                                                                                                                                                                   accGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACg                                                                                            <  2:646743/194‑1 (MQ=255)                                                                                                                                                                                                                                    ccGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGACAAAACCAATCCCa         <  1:153889/275‑1 (MQ=255)                                                                                                                                                                                                                                     cGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTg                                                                                                                                                                                                                                     >  2:195654/1‑55 (MQ=255)                                                                                                                                                                                                                                     cGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGGTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGACGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCAAGGCAGAACCGCTc                                                                                         >  2:669880/1‑195 (MQ=255)                                                                                                                                                                                                                                        aCCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGAGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGACAAAACCAATCCCAACCg     <  1:241652/275‑1 (MQ=255)                                                                                                                                                                                                                                         cccGTAATGGCGTATTGCCAGTAATTGTAAATATCTNCGTTCATCGTCATGTTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGTGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatc                                                                                     <  1:669889/195‑1 (MQ=255)                                                                                                                                                                                                                                         cccGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCa                                                                                                                                                                                                                                 <  1:195657/55‑1 (MQ=255)                                                                                                                                                                                                                                         cccGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTGTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAatc                                                                                     >  1:679748/1‑195 (MQ=255)                                                                                                                                                                                                                                            gTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCTCCAT‑TCGACACACCAGTCCCAGACCGACAAAACCaacaccctcccctc  >  2:384420/1‑262 (MQ=255)                                                                                                                                                                                                                                             tAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAAtcatca                                                                                 <  2:679739/195‑1 (MQ=255)                                                                                                                                                                                                                                               aTGGCGTAGTGCCAGTAATTGTAAATTTCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGAc                                                                                                                 >  1:113943/1‑161 (MQ=255)                                                                                                                                                                                                                                                tGGCGTAGTGCCAGTATTTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGa                       <  1:384426/249‑1 (MQ=255)                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                               ATCGATATTGCGTCCCTTCATGAAAGGGATTTTTTCATAGATAGCATCAAGTAGAACGAAAAGCGGTACTGAACTGGAACCGTAGCCTTGCGGTATCGAAATACCTTCCAGCCCGACGATGTTCTGTACCCGTTTTGCCGTCCAGTCGGCCATTTTTAACGATAGCGCCGCATGGCAGATTGCCCCCAGCACACCATAAATCAGGCTACCGGTCATAAGCTGGACCACCGTACCCGTAATGGCGTAGTGCCAGTAATTGTAAATATCGACGTTCATCGTTTTGGTCAGACGGGTGACCAGCATGGCGACATTGAGAAGAAAAATAACTGGGATAATCATGGCGCCAATGGCTGTCGCATAACCAACGCCGGAGGCAGGGCCTGCGCCAACGTCAAAGACATGCAGGGCTAGGCCGAAACGCTCAATCATCACTTTGATAGGGGGACTGAGGCTGTCGATCGCCATGACGA‑TCACCAGTCCCATACCGACAAAACCAATCCCAACCGTTA  >  CP009273/4519443‑4519951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.