New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3515028	32 (0.830)	24 (0.660)	10/296	NT	44.8%	coding (304/540 nt)	hofN	DNA catabolic putative fimbrial assembly protein
	?	CP009273	= 3515380	29 (0.800)					coding (731/780 nt)	hofM	DNA catabolic putative pilus assembly protein

CTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCG  >  CP009273/3515110‑3515615                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                            cTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTACGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Actgg                                                                                                                                                                                                                                         <  1:386788‑M2/275‑5 (MQ=255)                                        taGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGATGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATGGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCa                                                                                                                                                                                                  <  1:403166/274‑1 (MQ=255)                                         cgttgttgttCCGCCTCCAGCAAAGCTGCGGCGATGCCCGCGTCGGCGCTGCCTGGCAGACGCAGTATTAGCGTTATCCCGACCGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCa                                                                                                                                                                                                  <  2:680063/273‑1 (MQ=255)                                               tgttCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTGGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGTCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGCTGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggca                                                                                                                                                                                           <  1:14584‑M2/275‑51 (MQ=255)                                                                aaCTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCcac                                                                                                                                                                           >  1:198650/1‑274 (MQ=255)                                                                aaCTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGCCGGCTGACGAACAGAAACGGCCTCCCAGGGACCACAACCGccaaggcgag                                                                                                                                                                           >  2:118292/1‑266 (MQ=255)                                                                            ccgccctCCGGCGATGCCTGTCATACGACGTATTCGCTTTATCCCGACGGCCATCATCTGACGCGCAACGATCATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTCTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctggatatcaaggggctga                                                                                                                                                              >  2:14584‑M2/2‑196 (MQ=255)                                                                              gcgcTTCGGCGCTTCCTGTCAGACGCATTATTAGCGTTAGCCCGACGGCCAGCAGCAGAGTCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCTAAAAAGTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCttt                                                                                                                                                            <  1:632334/275‑1 (MQ=255)                                                                                    cGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGCTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAACGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACCGAACCGGCCTCCCAGGGATCCAATCCGCCGTCGCCCCAACCCGCGACGCTTTCGGGAt                                                                                                                                                      >  2:287010/1‑275 (MQ=255)                                                                                              gaaaaagagccacaTTAGCGTTATCCCGACGGCCAGCCGCAGCGGCGCAACGAACAGCAGCAACCAGAAGAGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATa                                                                                                                                             <  2:689893/261‑1 (MQ=255)                                                                                                                  ttATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAATCTGCGCTGGAAGCactggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctggagatcaaggggctgacaacaagcattaccgcgtaanacgcaccagaa                                                                                                                             <  2:61153‑M2/275‑113 (MQ=255)                                                                                                                  ttATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgataacgataagctggcagcagggaacgc                                                                                                                                                                                <  2:42260‑M2/219‑62 (MQ=255)                                                                                                                  ttATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  2:579734‑M2/219‑62 (MQ=255)                                                                                                                  ttATCCCGACGGCCAGCAGCAGAAGCGCTACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgctt                                                                                                                                                                                                                                 <  1:485794‑M2/170‑13 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  1:56291‑M2/217‑62 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  1:449411‑M2/217‑62 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  2:445738‑M2/217‑62 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaac                                                                                                                                                                                  <  2:348741‑M2/215‑60 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgacaagctggcagcagtggacgt                                                                                                                                                                                <  2:358076‑M2/217‑62 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgctt                                                                                                                                                                                                                                 <  2:292321‑M2/168‑13 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATcc                                                                                                                                                                                      >  2:416019/1‑211 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTcgc                                                                                                                       >  1:216930/1‑274 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCGccgaagcg                                                                                                                      >  1:446539/1‑269 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTACGCCACATATCACGACGCTTTCGGGATCAACGGATAACGATGCCGCCAGCTCCTTcgc                                                                                                                       >  1:96817/1‑274 (MQ=255)                                                                                                                    aTCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTCACGacga                                                                                                                                                                                                                >  1:396859/1‑182 (MQ=255)                                                                                                                      cccGCCGGCCAGCCGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttaa                                                                                                                                                                                                                             >  2:485787‑M2/1‑154 (MQ=255)                                                                                                                      cccGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgataacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  1:42260‑M2/1‑154 (MQ=255)                                                                                                                      cccGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagcgggcagcagggaacgctgga                                                                                                                                                                            >  1:579743‑M2/1‑154 (MQ=255)                                                                                                                      cccGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCgcgc                                                                                                                     <  1:43131/274‑1 (MQ=255)                                                                                                                      cccGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACCCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCGAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTgccgccctgtcacctatac                                                                                                                     >  1:689902/1‑261 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  2:449404‑M2/1‑152 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  1:445745‑M2/1‑152 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctg                                                                                                                                                                              >  1:348747‑M2/1‑152 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttac                                                                                                                                                                                                                             >  1:292327‑M2/1‑152 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGacgataag                                                                                                                                                                                                            <  2:396852/185‑8 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGACACGGCCTCCCAGGGATCAAATCCGCCt                                                                                                                                                                                  <  1:416026/211‑1 (MQ=255)                                                                                                                        cGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCAGCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  2:56291‑M2/1‑152 (MQ=255)                                                                                                                          aCGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGCATCAAATCCGCCTTCGCCACATATCGCGAc                                                                                                                                                                 >  1:678606/1‑226 (MQ=255)                                                                                                                              ccAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCttt                                                                                                                                                            <  1:248932/227‑1 (MQ=255)                                                                                                                              ccAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCtt                                                                                                                                                             <  2:678597/226‑1 (MQ=255)                                                                                                                               cagcagcagAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATccc                                                                                                           <  1:118293/275‑1 (MQ=255)                                                                                                                                                  aaCATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCNAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGcccc                                                                                        <  1:531904/275‑1 (MQ=255)                                                                                                                                                                                           cTGTCGCCAGGGCAAAAAATTAATTGGCTGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  1:565635‑M2/146‑62 (MQ=255)                                                                                                                                                                                           cTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATTAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑GTCCA‑‑CCTGGCGCCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGcc                                                                                          <  1:688886/232‑1 (MQ=255)                                                                                                                                                                                               cGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  2:565626‑M2/1‑81 (MQ=255)                                                                                                                                                                                                     ggCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAAt                                                                                                                                                                                        >  1:217343/1‑128 (MQ=255)                                                                                                                                                                                                      gCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  1:209353‑M2/135‑62 (MQ=255)                                                                                                                                                                                                        atgaaagacagtGGCGCGTTCACCCGTACGGCGTCCTTAGCGCCAGCCCCCGCATGTTGGCACTGT‑‑‑CCCCA‑‑CCTGGCGGCGGTAGCCGCGGCTGACGAACAGTAACGGCCTCCCCGGTATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACAt                                  <  2:96816/264‑1 (MQ=255)                                                                                                                                                                                                         aaaaaTTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGc                                                                                                                                                                                    <  2:217339/128‑1 (MQ=255)                                                                                                                                                                                                          aaaaTTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  2:209349‑M2/1‑70 (MQ=255)                                                                                                                                                                                                                aattGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGtt                                                                                                >  2:555822/1‑205 (MQ=255)                                                                                                                                                                                                                    ggCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCTCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCCCGCTAGTCATCCCCACCGCCAGTTTgcg                                                                                            <  1:555831/205‑1 (MQ=255)                                                                                                                                                                                                                                       cTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCggg                                                                                                                                                        >  2:634229/1‑126 (MQ=255)                                                                                                                                                                                                                                         caccACGCCCCCGCCCAAGCGCGATGTCACAGC‑‑‑CCCCA‑‑CCTGCCGGCCGTACCGCCGGCGGACGAACAGAAACGGCCTCCCAGTGATCAAATCCGCCTGCGCAACATATCGCGACGCTTTCGGGATCAACGGATAACTCTCCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCg  <  2:198647/272‑1 (MQ=255)                                                                                                                                                                                                                                                 gcCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgc                                                                                                                                                                                <  2:20818‑M2/92‑62 (MQ=255)                                                                                                                                                                                                                                                     gCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑Cctggcggcgcttttacccgagcacgcctggctgacaacgataagctggcagcagggaacgctgga                                                                                                                                                                            >  1:20818‑M2/1‑27 (MQ=255)                                                                                                                                                                                                                                                                              tcCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAg                                                                                                                                                                                                               >  2:539642/1‑35 (MQ=255)                                                                                                                                                                                                                                                                                cA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCtt                                                                                                                          >  2:495199/1‑118 (MQ=255)                                                                                                                                                                                                                                                                                    ccTGGCGGCGGTAGCGGCGGCTGACGAACAGAAAc                                                                                                                                                                                                           <  1:539650/35‑1 (MQ=255)                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                            CTCCAGCAAACGTGGCTTCGTTATCTGTAAGCTGCGGGCGAGTTGTTGTTCCGCCTGAAGCAAAACTGCGTCTATGCGCGCTTCGGCGCTGCCTGTCAGACGCAGTATTAGCGTTATCCCGACGGCCAGCAGCAGAGGCGCAACGAACATCAGCAACCAGAAACGCAGAAAAGCGGTCCGGCGTTGCTGTCGCCAGGGCAAAAAATTAATTGGCGGGTTCATCAGTACGCCTTCCCAAGCGCCAGCCCCAGCGCGATGGCAAAGT‑‑‑CTCCA‑‑CCTGGCGGCGGTAGCGGCGGCTGACGAACAGAAACGGCCTCCCAGGGATCAAATCCGCCTTCGCCACATATCGCGACGCTTTCGGGATCAACGGATAACGCTGCCGCCAGCTCCTTCGCGCTAGTCATCCCCACCGCCAGTTTGCGCCCCCAGCTATAGCGCGTCGCCCACAGCCACTGTTCGTTATCACGCCAGGCCAGACATTGCTGATGAGAAGGTAAAAAAGGCAGGAATCG  >  CP009273/3515110‑3515615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.