New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	3564632 =	44 (1.140)	9 (0.250)	6/300	NT	17.3%	coding (48/1974 nt)	glgX	glycogen debranching enzyme
	?	CP009273	3564798 =	44 (1.200)					coding (2065/2187 nt)	glgB	1,4‑alpha‑glucan branching enzyme

TGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACA  >  CP009273/3564525‑3565069                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                tgaccTGGCAATTTATCGCTATGTTCATGGCCATTGGCCGCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTg                                                                                                                                                                                                                                                                                <  1:241215/272‑1 (MQ=255)    ccTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACGCAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGANGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCg                                                                                                                                                                                                                                                                             <  1:529709/275‑1 (MQ=255)        gCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCAGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGAt                                                                                                                                                                                                                                                                         >  1:310132/1‑275 (MQ=255)          aaGGCATAGCGATGTTCCTGGCCATTGGCGTAAAAGACACAAAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGGAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATa                                                                                                                                                                                                                                                                        <  1:300950/274‑1 (MQ=255)                             ggCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGACAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGGATTGa                                                                                                                                                                                                                                                    >  1:637233/1‑275 (MQ=255)                                                                tCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCg                                                                                                                                                                                                                 >  1:174516/1‑275 (MQ=255)                                                                tCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAAGCTCATCGCTGTGTAACGTGCCGCCATTGCCTGGAATACTGCCGTGATAGTGCATGGAATAGGTATGGAGGGATTGGNGCCCTTTTCCCGACTTGttttttccc                                                                                                                                                                                                                 >  2:479398/1‑269 (MQ=255)                                                                         gCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCACTCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGAAATGAGGATTTCACGCCATTTGCGCGGCTGGTGTGTGCCNCGGCGCTaa                                                                                                                                                                                                        >  2:277848/1‑275 (MQ=255)                                                                                       gAAGTTGACGCCTTGACCGTCGTAATGCGCGCCGGTGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCGTTCTGCCTCCCTAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTa                                                                                                                                                                                           <  1:268639/274‑1 (MQ=255)                                                                                                         gtcgtAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGc                                                                                                                                                                        <  1:277853/275‑1 (MQ=255)                                                                                                                    cgcCGATGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAAt                                                                                                                                                                                                                                                             <  1:145264/179‑1 (MQ=255)                                                                                                                                 gggTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGNTAGTGCATGGAATCGGGATTGAGGATTTCACGCCATTTGCCCGGCTGGGTTATGCCGTAGCGATAATCATGACGCGGTACCGTCGTAAAGTTACTGGAAACGATGATTTCTTTACACTCatt                                                                                                                                                >  1:594891/1‑275 (MQ=255)                                                                                                                                       gCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGNATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGCTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTCCCCTCTTTATc                                                                                                                                             >  1:595808/1‑272 (MQ=255)                                                                                                                                               ggAGTTGTGTCAGTCCGCCTCCCGAACCGGCCAGTTAGTGGCCGGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGAGCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGcaca                                                                                                                                   <  2:595799/273‑1 (MQ=255)                                                                                                                                                                ccTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACg                                                                                                                                       >  2:216617/1‑253 (MQ=255)                                                                                                                                                                  tCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATg                                                                                                                                                                                                                                                                 >  1:665386/1‑129 (MQ=255)                                                                                                                                                                    ccGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGcaca                                                                                                                                   <  1:216621/253‑1 (MQ=255)                                                                                                                                                                     cGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGCGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGAAAAAAGATCAGCACCGAGCGTTCttt                                                                                                            >  1:317204/1‑275 (MQ=255)                                                                                                                                                                      gAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAAt                                                                                                                                                                                                                                                             <  2:665377/129‑1 (MQ=255)                                                                                                                                                                            gccagATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCGTCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCAt                                                                                                                                                                                                    >  2:142420/1‑180 (MQ=255)                                                                                                                                                                                gATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCGTCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGAcg                                                                                                                                                                                                <  1:142421/180‑1 (MQ=255)                                                                                                                                                                                 gcctgacgctaccaccgctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGAcgc                                                                                                                                                                                               >  2:612186‑M2/98‑180 (MQ=255)                                                                                                                                                                                     gacgctaccaccgctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTa                                                                                                                                                                                           <  1:612195‑M2/87‑1 (MQ=255)                                                                                                                                                                                            cGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACt                                                                                                                                                                                                                                                                                 >  1:221513/1‑87 (MQ=255)                                                                                                                                                                                            cGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGt                                                                                                                                                                                                                                                                      >  1:626307/1‑98 (MQ=255)                                                                                                                                                                                                ggtAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCg                                                                                                                                                                                                                                                                             <  2:221508/87‑1 (MQ=255)                                                                                                                                                                                                ggtAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCAt                                                                                                                                                                                                                                                                  <  2:626298/98‑1 (MQ=255)                                                                                                                                                                                                  ctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGc                                                                                                                                                                                                                                  >  2:259908‑M2/81‑128 (MQ=255)                                                                                                                                                                                                  ctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAGACGATAATCATNACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCctc                                                                                                                                                   >  1:650469‑M2/81‑207 (MQ=255)                                                                                                                                                                                                  ctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCgg                                                                                                                                                                                             >  1:297758‑M2/81‑165 (MQ=255)                                                                                                                                                                                                  ctggccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGAAGCACAAAGATCAGCACCGAACGTTCTTTGTCATCCCCCACCAGCCATTCAAAGCCg                                                                                >  1:246921‑M2/81‑274 (MQ=255)                                                                                                                                                                                                      ccactatctggctggttcgggaggcagaatgacacaactctccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGt                                                                                                                                                                                                                         <  1:344014‑M2/57‑1 (MQ=255)                                                                                                                                                                                                      ccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCgg                                                                                                                                                                                                                              <  1:259913‑M2/52‑1 (MQ=255)                                                                                                                                                                                                      ccactatctggctggttcgggaggcagaatgacacaactcgccattggcaaacccgctcccctcggcgcgcattacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGTCTGGTTTATGCCGAAGCGATAATCATGACGCGGTAcc                                                                                                                                                                                         <  2:297752‑M2/89‑1 (MQ=255)                                                                                                                                                                                                         aGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGACCGTTCTTTGTCATCAACCACAAGCCATTCAAAACCGAACGGGTc                                                                        >  1:68542/1‑275 (MQ=255)                                                                                                                                                                                                               aGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGc                                                                                                                                                                                                                                  >  2:477686/1‑115 (MQ=255)                                                                                                                                                                                                                   aaTGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCgg                                                                                                                                                                                                                              <  1:477693/115‑1 (MQ=255)                                                                                                                                                                                                                     tgatGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGt                                                                                                                                                                                                                                                                      >  2:21856/4‑73 (MQ=255)                                                                                                                                                                                                                     tGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAg                                                                                                                                                                                                              >  1:424174/1‑129 (MQ=255)                                                                                                                                                                                                                         gacgacCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCAt                                                                                                                                                                                                                                                                  <  1:21856/73‑1 (MQ=255)                                                                                                                                                                                                                         gacgacCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGAt                                                                                                                                                                                                          <  2:424167/129‑1 (MQ=255)                                                                                                                                                                                                                           cgacCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTNCACGCCATTTGCCCGGCTGCTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCa                                                       <  1:541785/274‑1 (MQ=255)                                                                                                                                                                                                                                    cttgcAATCTCATCGCTGTGTACCGTGCCGCCATTGTCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGACTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGTTCAGCACCGAGCGTTCTTTGTCATCCACCGCCAGCCATTCAACGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTAtg                                             <  1:400179/272‑1 (MQ=255)                                                                                                                                                                                                                                         aaTCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCNATTTGCCCNGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGc                                        <  1:479405/275‑1 (MQ=255)                                                                                                                                                                                                                                                 cGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTAc                                                                                                                                                                            >  1:43004/1‑135 (MQ=255)                                                                                                                                                                                                                                                  tttttgtACCCTGCCTCCATTGCCTGCCTTACTGCCGGGATAGTTCATGGAATCTGTATTGCTGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGCCGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCCCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGt                                 <  2:317198/269‑1 (MQ=255)                                                                                                                                                                                                                                                     gtgtACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGc                                                                                                                                                                        <  2:43004/135‑1 (MQ=255)                                                                                                                                                                                                                                                      tgtACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACg                                                                                                                                       >  2:310537/1‑167 (MQ=255)                                                                                                                                                                                                                                                      tgtACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGt                                                                               >  2:242191/1‑223 (MQ=255)                                                                                                                                                                                                                                                          ccGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGcaca                                                                                                                                   <  1:310543/167‑1 (MQ=255)                                                                                                                                                                                                                                                          ccGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACgg                                                                           <  1:242196/223‑1 (MQ=255)                                                                                                                                                                                                                                                             tGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTc                          >  1:604709/1‑269 (MQ=255)                                                                                                                                                                                                                                                              gccgccATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTa                                                                                                                                                                                                                      >  1:646831/1‑80 (MQ=255)                                                                                                                                                                                                                                                              gccgccATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTc                                                                                                               >  2:96363/1‑183 (MQ=255)                                                                                                                                                                                                                                                                  ccATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGcc                                                                                                                                                                                                                  <  2:646822/80‑1 (MQ=255)                                                                                                                                                                                                                                                                  ccATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTg                                                                                                           <  1:96364/183‑1 (MQ=255)                                                                                                                                                                                                                                                                   cATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCAcc              <  2:604700/275‑1 (MQ=255)                                                                                                                                                                                                                                                                     gaataagatctcatGCCGTGTTAGTGCGTGTAATTGGTATTGTGGCTTTCACTCCAGTTGTCCGGCTGGGTTATGCCGAAGCGATAAGCATGACGCGGTACCGGCGTAAAGTTACTGGAACCGCTGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCTTTCTTTGTCATCCACCAACGGCCCTTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAg            <  2:594882/262‑1 (MQ=255)                                                                                                                                                                                                                                                                               tacTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCAACGAGCGTTCTTTGTCATCCACCACCAGCAATTCAAAGCCGTACGGGTCAAAATCCAGCACCTGCATTGCTTTATGGTGGCGGAAGGGGGGGTTCAGACCGCGCACCAGNCgctggcac  >  2:277937‑M2/4‑272 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                                                TGCCCTGGCAAGTCATAGCGATGTTCCTGGCCATTGGCGTCAAAGACACACAGTTCTACCCGCTCGGCATGAGCGGAGAAAAGTGTGAAGTTGACGCCCTGACCGTCGTAATGCGCGCCGAGGGGAGCGGGTTTGCCAATGGCGAGTTGTGTCATTCTGCCTCCCGAACCAGCCAGATAGTGGCCAGCGGTGGTAGCGTCAGGCTTAGTGAATGCTGACGACCGTGGCTGGCAATCTCATCGCTGTGTACCGTGCCGCCATTGCCTGCATTACTGCCGTGATAGTGCATGGAATCGGTATTGAGGATTTCACGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACA  >  CP009273/3564525‑3565069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.