New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3894523	34 (0.880)	4 (0.110)	4/294	NT	10.1%	coding (1058/1617 nt)	bglH	carbohydrate‑specific outer membrane porin, cryptic
	?	CP009273	= 3894651	39 (1.080)					coding (930/1617 nt)	bglH	carbohydrate‑specific outer membrane porin, cryptic

GCCGGTGTGATCACCATAATAACGACCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAG  >  CP009273/3894399‑3894918                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                            gccgGTGTGATCACCATAATAACGACCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGAGCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATaa                                                                                                                                                                                                                                                         <  1:399671/273‑1 (MQ=255)                ataataACGACCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATc                                                                                                                                                                                                                                                               >  1:263548/1‑252 (MQ=255)                    taaCGACCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCAt                                                                                                                                                                                                                                                           <  2:263543/252‑1 (MQ=255)                         aCCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCTCTTTCGTTTGCCGTGCCATAACGAACACTTACCTTTCATTTGGCTTTATCCCAtatctttatatctttaatatttaaattaa                                                                                                                                                                                                                               >  2:364021/1‑262 (MQ=255)                         aCCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATa                                                                                                                                                                                                                                                          >  2:106216/1‑248 (MQ=255)                         aCCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATACCATAACGGGATATCTTTATAGCGtaaataaa                                                                                                                                                                                                                               >  1:149257/1‑275 (MQ=255)                           cATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGNTACTGGCGNTAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCTGTGACATCACGACCACTTACCATTaaggtggctt                                                                                                                                                                                                                                                                   >  1:465218‑M2/1‑227 (MQ=255)                             ttAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACgg                                                                                                                                                                                                                                                      <  1:106217/248‑1 (MQ=255)                                                ttGCGCCAGCATAACGGCCTAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAAc                                                                                                                                                                                                                                                        >  1:568626/1‑227 (MQ=255)                                                    gcCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGa                                                                                                                                                                                                                                                    <  2:568617/227‑1 (MQ=255)                                                                                                             ttCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATc                                                                                                                                                                                                                                                >  1:694014/1‑174 (MQ=255)                                                                                                                 ttGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTta                                                                                                                                                                                                                                            <  2:694005/174‑1 (MQ=255)                                                                                                                         acgtatATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATCATACCCGTTATTATACTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTGTCCCATACCGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGAGATATCAATTTTACACGGAcaa                                                                                                                                >  1:270040/6‑272 (MQ=255)                                                                                                                          ccTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACCACCACTTACCATTAAGGTGGCTTTATCCCATAAc                                                                                                                                                                                                                                                        >  1:311085/1‑153 (MQ=255)                                                                                                                              tATCAAATTTCTTCGTTAAATATTTGCCAAGCATCCAGGTATCTTTCCAGTCATAACACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATGAAGGTGGCTTTATCCCATAATGGGa                                                                                                                                                                                                                                                    <  2:311079/153‑1 (MQ=255)                                                                                                                                        cTGCGTTAAAGATGTGCCAAACATCCAGGTCTCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaaggtggcttcaacgaattccccttcctggtcgcgaataactctatcgccagtaactttggccgttatgctgccgcaagtccatttcc                                                                                                                                                                                     <  2:508857‑M2/206‑89 (MQ=255)                                                                                                                                            gTTAAAGATGGGCCAAACATCCNGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGGTTGCCGTGACATAACGACCACTTACCATTaaggtggcttcaacgaattctccttcctggtcgcgaataactctatcgccagtaactttggcttttatactggcgcaagtccatttaccacc                                                                                                                                                                                 >  1:508864‑M2/1‑114 (MQ=255)                                                                                                                                                     gtgCCAAACATCCAGGTATCTTTCCAGTAATAATACCCGTTATGATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAAt                                                                                                                                                                                                                                  >  1:522193/1‑148 (MQ=255)                                                                                                                                                        ccAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaaggtggc                                                                                                                                                                                                                                                                     <  2:181862‑M2/110‑9 (MQ=255)                                                                                                                                                         cAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAAt                                                                                                                                                                                                                              <  2:522186/148‑1 (MQ=255)                                                                                                                                                            aCATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTa                                                                                                                                                                                                                                                                 <  1:181865/110‑1 (MQ=255)                                                                                                                                                             cATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaaggtggcttcaacgaattctccttcctggtcgcgaataactctatcgccagtaactttggccgttatgctggc                                                                                                                                                                                                   <  2:40966‑M2/171‑75 (MQ=255)                                                                                                                                                                ccAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCAGCATCa                                                                                         >  1:301680/1‑274 (MQ=255)                                                                                                                                                                ccAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGATGCGaatagta                                                                                                                                                                                >  1:718396/1‑181 (MQ=255)                                                                                                                                                                ccAGGTATCTTTCCAGTCATAATACCCGGCATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATT‑GTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGNAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAg                                                                                        >  1:501889/1‑274 (MQ=255)                                                                                                                                                                 cAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaaggtggcttcaacgaattctccttcctggtcgcgaataactctatcgccagtaactttggccgttatgctggcgcaa                                                                                                                                                                                               >  1:40966‑M2/1‑93 (MQ=255)                                                                                                                                                                         tttCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATGCCATAACGGGAGATCTTTATAGCGTAAATCAAtg                                                                                                                                                                                                                             >  1:241852/1‑133 (MQ=255)                                                                                                                                                                             cAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAAtggtat                                                                                                                                                                                                                         <  2:241847/133‑1 (MQ=255)                                                                                                                                                                                            ttattaTCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCtgtttgt                                                                                                                                                                                                    >  1:239830/1‑139 (MQ=255)                                                                                                                                                                                                tatCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTg                                                                                                                                                                                                <  2:239825/139‑1 (MQ=255)                                                                                                                                                                                                       aTTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCAtt                                                                                                                                                                                                                                                                             >  2:629689/1‑55 (MQ=255)                                                                                                                                                                                                       aTTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATc                                                                                                                                                                                                                                                               >  1:255922/1‑69 (MQ=255)                                                                                                                                                                                                       aTTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAAc                                                                                                                                                                                                                                                        >  1:79349/1‑76 (MQ=255)                                                                                                                                                                                                       aTTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGt                                                                                                                      >  2:85812/1‑206 (MQ=255)                                                                                                                                                                                                       aTTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAAttt                                                 >  1:186658/1‑275 (MQ=255)                                                                                                                                                                                                           tCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaagg                                                                                                                                                                                                                                                                         >  1:629698‑M2/1‑51 (MQ=255)                                                                                                                                                                                                           tCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCAt                                                                                                                                                                                                                                                           <  2:255917/69‑1 (MQ=255)                                                                                                                                                                                                           tCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGa                                                                                                                                                                                                                                                    <  2:79348/76‑1 (MQ=255)                                                                                                                                                                                                           tCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTc                                                                                                                  <  1:85813/206‑1 (MQ=255)                                                                                                                                                                                                              ttttCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCAtt                                                                                                                                                                                                                                                                             >  2:86796/1‑48 (MQ=255)                                                                                                                                                                                                              ttttCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAAtg                                                                                                                                                                                                                             >  1:49552/1‑96 (MQ=255)                                                                                                                                                                                                               tttCCGTTGCGCTTTCTTTTGCCTTGACATTACGACCACTTACCATTTAGTTGGCTTTATCACATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCa                                         <  1:5978/275‑1 (MQ=255)                                                                                                                                                                                                                 tCCGATGCGCTTTCGTTTGCCGTGACATAGCGACCACTTACCATTAAGGTGGCTTTATccc                                                                                                                                                                                                                                                             >  2:321630/1‑61 (MQ=255)                                                                                                                                                                                                                  ccGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTaagg                                                                                                                                                                                                                                                                         >  1:86797‑M2/1‑44 (MQ=255)                                                                                                                                                                                                                  ccGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAAtggtat                                                                                                                                                                                                                         <  2:49552/96‑1 (MQ=255)                                                                                                                                                                                                                     aTGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATaa                                                                                                                                                                                                                                                         <  1:321636/61‑1 (MQ=255)                                                                                                                                                                                                                                  tGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAAcc                                                                                                                                                           >  2:443076/1‑142 (MQ=255)                                                                                                                                                                                                                                     cGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATa                                                                                                                                                                                                                                                          >  2:183639/1‑44 (MQ=255)                                                                                                                                                                                                                                      gTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAgcg                                                                                                                                                       <  1:443083/142‑1 (MQ=255)                                                                                                                                                                                                                                         aCATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACgg                                                                                                                                                                                                                                                      <  1:183642/44‑1 (MQ=255)                                                                                                                                                                                                                                            tAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAAGCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGAGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGTAATCAGCctc            <  1:702182/275‑1 (MQ=255)                                                                                                                                                                                                                                                        aCCATTAAGGCGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCTTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCCCCGTGTTTACCCACCCAGAAATCATCCTCTGacgacact  >  1:708109/1‑268 (MQ=255)                                                                                                                                                                                                                                                             tAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTgtttgttt                                                                                                                                                                                                  >  2:492211/1‑76 (MQ=255)                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                            GCCGGTGTGATCACCATAATAACGACCATTAAAGGTGGTAAATGGACTTGCGCCAGCATAACGGCCAAAGTTACTGGCGATAGAGTTATTCGCGACCAGGAAGGAGAATTCGTTGAAGCCACCTTTATCAAATTTCTGCGTTAAAGATGTGCCAAACATCCAGGTATCTTTCCAGTCATAATACCCGTTATTATCCTGATTATCTTTTTCCGATGCGCTTTCGTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGCGCAAAG  >  CP009273/3894399‑3894918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.