New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3913891	18 (0.470)	7 (0.190)	6/304	NT	23.2%	coding (358/471 nt)	atpF	F0 sector of membrane‑bound ATP synthase, subunit b
	?	CP009273	= 3914106	29 (0.780)					coding (143/471 nt)	atpF	F0 sector of membrane‑bound ATP synthase, subunit b

CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCAC  >  CP009273/3913836‑3914372                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                           cgttcgttGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTctgc                                                                                                                                                                                                                                                                        >  1:332122‑M2/1‑271 (MQ=255) cGTTCGGTGATCTTCTCGGCGCCAGCAAAAGCCAGGATAGCAACGTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCNCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGACCTTATGTGCTCGTTctg                                                                                                                                                                                                                                                                         <  1:515100‑M2/274‑4 (MQ=255)             ttctCGGCGCCAGCAACAGCCAGGATAGTAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCNGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGcc                                                                                                                                                                                                                                                            >  1:531168/1‑275 (MQ=255)                                  aGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTATGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACg                                                                                                                                                                                                                                       <  1:395943/275‑1 (MQ=255)                                                         ctctTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTTGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTTGTGCTGGCCTTTGCCAGGTCACGGCCCTTGTGTGCGCGTTCTGCGGGAGCAAGGCGGGCAGCACTCTCTTTTGTCCGTTTTTCGTGGGCtctcatggtt                                                                                                                                                                                                                 >  2:282008/1‑265 (MQ=255)                                                                 gggCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtggatg                                                                                                                                                                                                         >  1:712518‑M2/1‑207 (MQ=255)                                                                   gCATGTTTACGCTCGGCTTCTATTTCCGCCTGCGCCTGGTCCACGATTTTAGTTCGTTCCTGTTCTGCCTCAGCTTTCGCGTCGTCCAGAANCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATTGCTGCCAATAATGGCGGCCATAc                                                                                                                                                                                                      <  1:494321/275‑1 (MQ=255)                                                                   gCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGCTCCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgcctcgaagatcatcgaacgttccgtggcttcat                                                                                                                                                                                                      <  2:712508‑M2/275‑71 (MQ=255)                                                                                           ttccccttcgccttGGCCACTTTTTTTGTTCGTTCCTGTTCTGCCTCCGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTTTTCGCCTNCTCGATTATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAgaacgaa                                                                                                                                                                              <  1:528832/271‑1 (MQ=255)                                                                                                   cgcctgGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGAACaa                                                                                                                                                                      >  1:58604/1‑275 (MQ=255)                                                                                                                                     gCCTCATCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGTTCGATTATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAg                                                                                                                                    <  1:574387/275‑1 (MQ=255)                                                                                                                                      ccTCAGTTTTCGCTTCGTCCATATTCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAg                                                                                                                                    <  1:418390/274‑1 (MQ=255)                                                                                                                                           gCTTTCGCTTCGTCCAGAATCCGTCAGCAACGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTNCCATTGATGGCGGCCATACGTACTTCATGCAGAACAGAACGAAAAGGACCAACGCGAGGGCCCGGCCGAGGAtttttggggttagcatcac                                                                                                                              >  1:490395/1‑262 (MQ=255)                                                                                                                                                      gTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtggatgaagctgctaacagcgacatcgtggataaacttgtcgct                                                                                                                                                                   <  2:570203‑M2/227‑106 (MQ=255)                                                                                                                                                          aGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTTGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtggatgaagctgctaacagcgacatcgtcgataaacttgtcgctgaac                                                                                                                                                               >  1:570212‑M2/1‑118 (MQ=255)                                                                                                                                                                 gCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCAt                                                                                                                                                                                                        >  1:312076/1‑179 (MQ=255)                                                                                                                                                                     gcggcgTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGt                                                                                                                                                                                                    <  2:312070/179‑1 (MQ=255)                                                                                                                                                                                       cTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGCTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTGTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGAACAAAGCCCCTATGTANTTAACTTTcgtttatttcgttt                                                                                    >  2:428170/1‑260 (MQ=255)                                                                                                                                                                                                 aCCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGTCTGCCATTATTGGCGGCCATCCGTACTTCATNCAGAACAGAACGAACAGGCCAAACGCGATGGCCTGGCCGAGGATGGTTGCGTTAAGATTCACAGCAAAATGACTCGATTTAGTTAACGTTCTGATATTTTTATTTAAATAAAAgaa                                                                        >  1:658287/1‑273 (MQ=255)                                                                                                                                                                                                           ccGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTCTGTGCTCGTACTGCGGACGCAAGGCCGTCAGCAATCTCTTTTTGACGTTTTTCGAt                                                                                                                                                                                                                              >  2:225288/1‑115 (MQ=255)                                                                                                                                                                                                               tttcgctttTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTGTTTGACGTTTTTCGATGGCt                                                                                                                                                                                                                          <  1:225293/115‑1 (MQ=255)                                                                                                                                                                                                                ttcgctttTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTACGGAATCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGAGGGCTGACATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCctc                                                                                                                 <  1:629869/219‑1 (MQ=255)                                                                                                                                                                                                                       tttcccgcgcnccgggcgCGCTTGCCTTTGCAAGGTCAAGTTCCTTTTGTGCTCGTTCTGCGGAATCAAGGACGTTAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTCATGGACGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTTCGTTAAGAGTCACAGCACAATGCCTCTATTTAGTTAGCGTTCATATATTGCTCTTGAGATAAAAGCAACGCTTACTACGCGTCAGCGa                                                   <  2:58603/262‑1 (MQ=255)                                                                                                                                                                                                                           cAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGTTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATc                                              <  1:282013/275‑1 (MQ=255)                                                                                                                                                                                                                            tgCTGGTCGGTCGCGCTTGCCTTTTCAATGTCAAGCTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCCACGCTTACTACGCGACAGCGAACATCa                                             <  1:428177/274‑1 (MQ=255)                                                                                                                                                                                                                                 gtcggtcgCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAAt                                                                                                                                                                                                                 >  1:435015/1‑106 (MQ=255)                                                                                                                                                                                                                                     gtcgCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATggcg                                                                                                                                                                                                             <  2:435008/106‑1 (MQ=255)                                                                                                                                                                                                                                                          tcaaggtcCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtg                                                                                                                                                                                                             <  1:52320‑M2/85‑64 (MQ=255)                                                                                                                                                                                                                                                              ggtcCTTATGTGCTCGTTctgcgtaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtggatg                                                                                                                                                                                                         >  2:52320‑M2/1‑18 (MQ=255)                                                                                                                                                                                                                                                               gtcCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGCTGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGAAACGCTTACTACACGACAGCGAACATCACGAACAGACCCAGACCTACAGCGATCAACGGGaa           >  1:343620/1‑273 (MQ=255)                                                                                                                                                                                                                                                                    tATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATGTAg                                                                                                          >  1:447999/1‑174 (MQ=255)                                                                                                                                                                                                                                                                    tATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATAAGTACTTCATGCAGAACAGAACGAACAGGACAAACGCTATGGCCTGGCCGAGGATTGTTGCGTTAAGTTTCACAGCCCAATGCCTCTATTTAg                                                                                                          >  2:460287/1‑174 (MQ=255)                                                                                                                                                                                                                                                                       gtgCTCGTTCTGCGGAAGCAAGGCCGGCAGCAATCTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGANTTTGCTCTNTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTAAAGCGATCATCGGAATAGAAAccac  >  1:479549/1‑275 (MQ=255)                                                                                                                                                                                                                                                                        tgCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTaa                                                                                                      <  2:447992/174‑1 (MQ=255)                                                                                                                                                                                                                                                                        tgCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAAc                                                                                                     >  1:348738/1‑175 (MQ=255)                                                                                                                                                                                                                                                                        tgCGCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGCTAAGATTTACAGCACAATGCCTCTATTTAGTTaa                                                                                                      <  1:460294/174‑1 (MQ=255)                                                                                                                                                                                                                                                                         gCTCGTTctgcggaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtg                                                                                                                                                                                                             <  2:437715‑M2/70‑64 (MQ=255)                                                                                                                                                                                                                                                                          cTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGAt                                                                                                                                  >  2:152180/1‑144 (MQ=255)                                                                                                                                                                                                                                                                            cGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTc                                                                                                 <  2:348732/175‑1 (MQ=255)                                                                                                                                                                                                                                                                            cGTTCTGCGGAAGCAAGGCCGACAGCAACTTCTTTTTGACGTTATTCGATGGCTGCCATTAAttg                                                                                                                                                                                                               >  1:525694/1‑63 (MQ=255)                                                                                                                                                                                                                                                                             gTTctgcggaagcaagttgctatcctggctgttgctggcgccgagaagatcatcgaacgttccgtggatg                                                                                                                                                                                                         >  1:437722‑M2/1‑3 (MQ=255)                                                                                                                                                                                                                                                                              ttCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGCCAAACGCGAtggcct                                                                                                                                                          >  2:270257/1‑116 (MQ=255)                                                                                                                                                                                                                                                                              ttCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTcac                                                                                                                              <  1:152183/144‑1 (MQ=255)                                                                                                                                                                                                                                                                               |                                                                                                                                                                                                                                                                           CGTTCGATGATCTTCTCGGCGCCAGCAACAGCCAGGATAGCAACTTGCTTACGCAGCTCTTCACGGGCACGTTTACGCTCGGCTTCAATTTCCGCCTGCGCCTGGGCCACGATTTTAGTACGTTCCTGTTCTGCCTCAGCTTTCGCTTCGTCCAGAATCTGCGAGCGGCGTTTGTTCGCCTGCTCGATGATTACCTGGGCTTCCGCTTTCGCTTTTTTCAGCTGGTCGGTCGCGCTGGCCTTTGCAAGGTCAAGGTCCTTATGTGCTCGTTCTGCGGAAGCAAGGCCGTCAGCAATTTCTTTTTGACGTTTTTCGATGGCTGCCATTAATGGCGGCCATACGTACTTCATGCAGAACAGAACGAACAGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCAC  >  CP009273/3913836‑3914372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.