New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4238808 =	47 (1.170)	4 (0.100)	3/300	NT	9.4%	coding (910/1341 nt)	lamB	maltose outer membrane porin (maltoporin)
	?	CP009273	4238948 =	32 (0.820)					coding (1050/1341 nt)	lamB	maltose outer membrane porin (maltoporin)

CTTGGCGTAGGTTGCGAAGACACGAATAGCCGGGCGTGACCAGATGCTGTCGCCAGCCTGCCATTGTTGTGCGAGGGTAATTTTGTACTGATTGTTCTTGTCGCCGGTGCGCTGGGATTCGACGTTGTCGTAGCCGATTTCCATCACGGTGCTCATGATTGGCGTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4239086‑4238808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggaAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAGGCTG  >  CP009273/4238948‑4239033                                                                                                                                                                                                                                                                                                                                                                               CTTGGCGTAGGTTGCGAAGACACGAATAGCCGGGCGTGACCAGATGCTGTCGCCAGCCTGCCATTGTTGTGCGAGGGTAATTTTGTACTGATTGTTCTTGTCGCCGGTGCGCTGGGATTCGACGTTGTCGTAGCCGATTTCCATCACGGTGCTCATGATTGGCGTCCACTTGTACATCGGGCGNATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCA                                                                                            >  1:568623/1‑275                                                                                                                                                                TGGCGTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAG      >  2:655567/1‑202                                                                                                                                                                TGGCGTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGAC                                                >  1:466546/1‑160                                                                                                                                                                    GTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGA                                            <  2:466539/160‑1                                                                                                                                                                    GTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTAGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGAAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAGGCTG  <  1:655581/202‑1                                                                                                                                                                                                                                                                                                                                                                               CTTGGCGTAGGTTGCGAAGACACGAATAGCCGGGCGTGACCAGATGCTGTCGCCAGCCTGCCATTGTTGTGCGAGGGTAATTTTGTACTGATTGTTCTTGTCGCCGGTGCGCTGGGATTCGACGTTGTCGTAGCCGATTTCCATCACGGTGCTCATGATTGGCGTCCACTTGTACATCGGGCGAATACCGACGGTCCACCACTTGGTGCCGTTGTCGTTATCCCAGTTGATATCCTGGTACATACCCACGTACATCATGTCCCAGTTGTCGCCCATGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4239086‑4238808 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggaAATCGGCTACGACAACGTCGAATCCCAGCGCACCGGCGACAAGAACAATCAGTACAAAATTACCCTCGCACAACAATGGCAGGCTG  >  CP009273/4238948‑4239033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.