New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3921394	42 (1.050)	6 (0.160)	5/296	NT	18.2%	coding (880/993 nt)	asnA	asparagine synthetase A
	?	CP009273	= 3921515	14 (0.370)					coding (1449/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein

TGAGCGATGGTCATCGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCAGCGTCTGAGCAGGCGGCTTCGCATCCCGGT  >  CP009273/3921128‑3921553                                                                                                                                                                                                                                                                           |                                                                                                                                                                tGAGCGTTGGTCATCGCCACGACGTGCTGGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCgg                                                                                                                                                          <  1:306986/274‑1 (MQ=255)   aGCGATGGTCATCGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGCGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGAGCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGACTGGAGCTGGAGTGGCAACCGGCGAGGCAGGGGGGTGAAAGGCCCGGAACCACGGGGGGCGGTGTCggt                                                                                                                                                         >  2:306981/1‑272 (MQ=255)               cGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGa                                                                                                                                            <  1:336437/274‑1 (MQ=255)                        ctGCGCGCACCGGATTGTGATGGCGGGCGCACCCCGTAAGAGCTGGGCCATGCGGGTCTGAACGGAGATAGTCTGGTGTGGAACCCGGTACTGGAAGAGGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTAtgctg                                                                                                                                    <  2:337443/272‑1 (MQ=255)                                                               gagCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGGCTCGGTTGACTATGCTGCTGCTGCACCTGCCCGCTATCGGCCCGGTTCGATTTGGAGt                                                                                           >  2:329365/1‑275 (MQ=255)                                                                  cTGGGCCATGCGAGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGTCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCAGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGGTCAGTGTGGAGTATg                                                                                        >  1:729571/1‑275 (MQ=255)                                                                         ttGCGTGTTTGTACTGCGATTTTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAgc                                                                                  <  1:391926/273‑1 (MQ=255)                                                                           gCGGGTCTGAACGGCTTTATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAgctg                                                                                <  1:329371/274‑1 (MQ=255)                                                                                                   gtgtGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTAtgctgctgct                                                                                                                               >  2:139381/1‑203 (MQ=255)                                                                                                       ggAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCaa                                                                                                                           <  1:139382/203‑1 (MQ=255)                                                                                                           cccGGTACTGGAAGATGTGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTTACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGtaa                                                <  1:105837/274‑1 (MQ=255)                                                                                                                          tGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAAc                                                                                                                          >  2:404205/1‑185 (MQ=255)                                                                                                                          tGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAg                                                                                                   >  2:182656/1‑208 (MQ=255)                                                                                                                              tttGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGtgtg                                                                                               <  1:182658/208‑1 (MQ=255)                                                                                                                              tttGAGCATTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGcc                                                                                                                      <  1:404212/185‑1 (MQ=255)                                                                                                                                                   aTCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGGGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCCTCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGATGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGGGGAGTATTGACAGATGCTGTTAGCGAGAGCATCCCTTCTCTGCTGTAATAATTTATCACCGCCAACGTCTGATAAGGAGGCTTCACAt        >  1:425459/1‑274 (MQ=255)                                                                                                                                                        tgtAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGtc                                                                                                                                                    >  2:486096/1‑129 (MQ=255)                                                                                                                                                            gATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCTTCGGCGGCGGTATCGGCCAGTCTCGt                                                                                                                                                <  1:486105/129‑1 (MQ=255)                                                                                                                                                               gCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGc                                                                                                                                                         >  1:11730/1‑117 (MQ=255)                                                                                                                                                                   acacGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGt                                                                                                                                                     <  2:11730/117‑1 (MQ=255)                                                                                                                                                                                 cAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgcgaacagcagctggccatactccacactgaacctggccgatatgcggcagttgcagcag                                                                     >  1:298784‑M1/1‑91 (MQ=255)                                                                                                                                                                                     tGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgcgaacagcagctggccatactccacactgaacctggccgatatgcggcagttgcagcagcagc                                                                 <  2:298779‑M1/183‑97 (MQ=255)                                                                                                                                                                                        cgcTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgc                                                                                                                               >  1:408621‑M1/1‑84 (MQ=255)                                                                                                                                                                                            gACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgcgaac                                                                                                                           <  2:408614‑M1/118‑39 (MQ=255)                                                                                                                                                                                             aCCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATc                                                                                                               >  1:575155/1‑129 (MQ=255)                                                                                                                                                                                                 gTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGcc                                                                                                           <  2:575142/129‑1 (MQ=255)                                                                                                                                                                                                  tGAAGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAAc                                                                                                                          >  1:29034/1‑113 (MQ=255)                                                                                                                                                                                                      gAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGcc                                                                                                                      <  2:29033/113‑1 (MQ=255)                                                                                                                                                                                                         gATCGCCTGGCGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTc                                                               >  1:729394/1‑165 (MQ=255)                                                                                                                                                                                                            cGCCTGGAGCTAGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGAACATCGGCGGCGGTATCGGc                                                                                                                                                         >  2:435057/1‑72 (MQ=255)                                                                                                                                                                                                             gCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCtt                                                           <  2:729380/165‑1 (MQ=255)                                                                                                                                                                                                                tggagctggagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgc                                                                                                                               >  2:381725‑M1/1‑60 (MQ=255)                                                                                                                                                                                                                tggagctagagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGt                                                                                                                                                     <  1:435064/72‑1 (MQ=255)                                                                                                                                                                                                                    gctggagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGataaattattacagcagagaagggacgctctcgcgaac                                                                                                                           <  1:381732‑M1/94‑39 (MQ=255)                                                                                                                                                                                                                    gctggagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTctct                                                       >  1:380991/1‑162 (MQ=255)                                                                                                                                                                                                                        gagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCatat                                                                                                                >  1:130780/1‑101 (MQ=255)                                                                                                                                                                                                                        gagTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTctgctg                                                   <  2:380984/162‑1 (MQ=255)                                                                                                                                                                                                                            ggCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGc                                                                                                            <  2:130779/101‑1 (MQ=255)                                                                                                                                                                                                                                  aGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAAtt                                           >  1:679144/1‑160 (MQ=255)                                                                                                                                                                                                                                   ggCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAAc                                                                                                                          >  2:362545/1‑80 (MQ=255)                                                                                                                                                                                                                                   ggCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGcc                                                                                                           >  2:715800/1‑95 (MQ=255)                                                                                                                                                                                                                                      gctgctGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATc                                       >  2:679130‑M2/1‑159 (MQ=255)                                                                                                                                                                                                                                       ctgctgCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGcc                                                                                                                      <  1:362552/80‑1 (MQ=255)                                                                                                                                                                                                                                       ctgctgCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGt                                                                                                       <  1:715814/95‑1 (MQ=255)                                                                                                                                                                                                                                        tgctgcGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGc                                                                                                                                                         >  1:320796/1‑44 (MQ=255)                                                                                                                                                                                                                                        tgctgcGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCGGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCAGCGTCTGAGCAGGCGGCTTCGc          >  2:532255/1‑187 (MQ=255)                                                                                                                                                                                                                                            gcgcGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGt                                                                                                                                                     <  2:320790/44‑1 (MQ=255)                                                                                                                                                                                                                                            gcgcGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCAGCGTCTGAGCAGGCGGCTTCGCATcc      <  1:532264/187‑1 (MQ=255)                                                                                                                                                                                                                                                                ccAGCGGGGGCGGTAGCGGCCAGGCTCGTTTGACTAGGCTGCTGCTGCAACTGCCGCATATGGGCCAGGTTCAGTGTGGAGTATGGCCAGCGGCAGTTCGGGAGAGCGTCCCTTCTctg                                                      <  1:41582/119‑1 (MQ=255)                                                                                                                                                                                                                                                                      gcggcgataaattattacagcagagaagggacgctctcgcgaacagcagctggccat                                                                                                              >  2:546133‑M1/1‑6 (MQ=255)                                                                                                                                                                                                                                                                          cgataaattattacagcagagaagggacgctctcgcgaacagcagctggccatactc                                                                                                          <  1:546144‑M1/57‑56 (MQ=255)                                                                                                                                                                                                                                                                           gataaattattacagcagagaagggacgctctcgcgaacagcagctggccatactccacactgaacctggccgatatgcggcagttgcagcagcagcatagtcaaacgagactggccgataccgccgccgatggtctgcggcatttcaccgcgcagcagc  >  2:679130‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                           |                                                                                                                                                                TGAGCGATGGTCATCGCCACGACGTGCGCGCACCGGATTATGATGACTGGAGCACCCCGTCAGAGCTGGGCCATGCGGGTCTGAACGGCGATATTCTGGTGTGGAACCCGGTACTGGAAGATGCGTTTGAGCTTTCCTCCATGGGGATCCGTGTAGATGCCGACACGCTGAAGCATCAACTGGCGCTGACCGGTGACGAAGATCGCCTGGAGCTGGAGTGGCATCAGGCGCTGCTGCGCGGTGAAATGCCGCAGACCATCGGCGGCGGTATCGGCCAGTCTCGTTTGACTATGCTGCTGCTGCAACTGCCGCATATCGGCCAGGTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCAGCGTCTGAGCAGGCGGCTTCGCATCCCGGT  >  CP009273/3921128‑3921553

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.