New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4125531	43 (1.070)	5 (0.130)	5/296	NT	10.6%	coding (1769/2181 nt)	katG	catalase‑peroxidase HPI, heme b‑containing
	?	CP009273	= 4125717	43 (1.120)					coding (1955/2181 nt)	katG	catalase‑peroxidase HPI, heme b‑containing

GTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGG  >  CP009273/4125266‑4125803                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                 gtgAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGt                                                                                                                                                                                                                                                                          <  1:119695/274‑1 (MQ=255)                          tGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCaa                                                                                                                                                                                                                                                >  1:203129/1‑275 (MQ=255)                                    ggAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGAt                                                                                                                                                                                                                                                                <  1:316786/249‑1 (MQ=255)                                                       tCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTTAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAAGGACTgc                                                                                                                                                                                                                   >  1:591254/1‑275 (MQ=255)                                                       tCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCAGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCCCGCTAGTCTGGGCGTTTCCACCACCGAACCCCTGCCGATCGACAAAGGACAGCCACCAACCGCGCCCGCGCCGGcaaggtctt                                                                                                                                                                                                                    >  2:697509/1‑268 (MQ=255)                                                                     gCTGGCGGATATCTTTGTGTTGGCTGGTGTGTTTTGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGggcggc                                                                                                                                                                                                      <  1:122582/274‑1 (MQ=255)                                                                                           gctggTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTACGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCActgc                                                                                                                                                                                                                                                                    >  2:401994/1‑190 (MQ=255)                                                                                           gctggTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCAAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCTCCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCAATCGTATACTGGGTGCCAAAtt                                                                                                                                                                               >  1:380539/1‑275 (MQ=255)                                                                                              ggTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGa                                                                                                                                                                            <  1:159370/275‑1 (MQ=255)                                                                                               gtgtGGTTGGTGCTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTACGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGAt                                                                                                                                                                                                                                                                <  1:402001/190‑1 (MQ=255)                                                                                                tgtgGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATg                                                                                                                                                                          >  1:324250/1‑275 (MQ=255)                                                                                                    tttggtGTTGCGAAAGCGGCAAGCGCCGCAGGTTTGGGCTTTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGgc                                                                                                                                                                        <  2:324244/272‑1 (MQ=255)                                                                                                           ttGAGTAAGCCGCAAGCGCCGCAGGTTTGTGCATTCATGTACCGTTTTCGCCGGGTCGCGGTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTAACGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAAc                                                                                                                                                               <  1:643057/275‑1 (MQ=255)                                                                                                               gaAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCg                                                                                                                                                           <  1:68510/275‑1 (MQ=255)                                                                                                                   gCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAg                                                                                                                                                                                                                                                                           >  1:542280/1‑159 (MQ=255)                                                                                                                       cAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCAc                                                                                                                                                                                                                                                                       <  2:542269/159‑1 (MQ=255)                                                                                                                                      tgggCATTCATGTACCGTTTCGGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTa                                                                                                                                    <  1:14724/272‑1 (MQ=255)                                                                                                                                         tataagagacagcGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCGGCTGGAGCCAATTGCTGACGGTGTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTAtt                                                                                                                                  <  1:216030/262‑1 (MQ=255)                                                                                                                                             tCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGATGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCAGGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGACTTCACTGACCGCGGTGGCGTATTGAGCa                                                                                                                             >  1:413608/1‑275 (MQ=255)                                                                                                                                                   acggTTTGCGCGGGGTCGCGTTGAGGCGCGGTAGGATCAGACGGAGAGGGAGATGTGTGAGCGGATGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCAGTCGTTTGGACGTTTCCACCACCGAGTCACTGCTGAGCGAAAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGAACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGAct                                                                                                                       <  1:92626/272‑1 (MQ=255)                                                                                                                                                       tttGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGggc                                                                                                                                                                                                         >  1:31265/1‑189 (MQ=255)                                                                                                                                                       tttGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCCCGTTGGCGTATTGAGCAATGActtctt                                                                                                                   >  1:440863/1‑275 (MQ=255)                                                                                                                                                           cgcCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCa                                                                                                                                                                                                     <  2:31264/189‑1 (MQ=255)                                                                                                                                                                ggTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGCCTGCGCTGGTGGGCGGCAGGCGGGTACTGGGTGCCAACTTCGATGGCAGCAAAACCGGCGTCTTCACTGACCGCGGTGGCGTGTGGGGCAATGTctctgtccctttat                                                                                                           >  2:216028/1‑262 (MQ=255)                                                                                                                                                                      gTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCTCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGATAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGa                                                                                                    <  1:697523/275‑1 (MQ=255)                                                                                                                                                                                     gATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAgtg                                                                                     <  1:465863‑M2/275‑4 (MQ=255)                                                                                                                                                                                               aCATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACtcgtaacgcatatccagc                                                                                                                                                                                                                                                                >  1:28545‑M1/1‑76 (MQ=255)                                                                                                                                                                                               aCATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGggcgg                                                                                                                                                                                                       >  1:189303/1‑151 (MQ=255)                                                                                                                                                                                               aCATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCaaa                                                                                                                                                                  >  1:30668/1‑188 (MQ=255)                                                                                                                                                                                                 aTTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACGGCGTTGGCGTATTGAGCAATGACTACTTCGTGAACTTGCTGGCTATGCGTTCCGAgtggaaatcgagg                                                                           <  2:196143‑M2/273‑14 (MQ=255)                                                                                                                                                                                                   tGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACtcgtaacgcatatccagcaagt                                                                                                                                                                                                                                                            <  2:28544‑M1/94‑23 (MQ=255)                                                                                                                                                                                                   tGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATg                                                                                                                                                                                                   <  2:189301/151‑1 (MQ=255)                                                                                                                                                                                                   tGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACg                                                                                                                                                              <  2:30667/188‑1 (MQ=255)                                                                                                                                                                                                     agaTGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGTGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCAGTGACcgc                                                                                                                                             >  1:721675/1‑203 (MQ=255)                                                                                                                                                                                                         gTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTg                                                                                                                                         <  2:721661/203‑1 (MQ=255)                                                                                                                                                                                                               gctgctGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACtcgtaacgcatatccagcaagttcacgaagaagtcattgctcaatacgccaacgcggtcagtgaagacgccgtttttgctgccatcgaagttggcacccagtacacgcatgccgcccaccagcgcagtcatttccggcgcggtcagcgtcagttgctgtgctttgtcgatcagcag                                                                                                  <  1:107910‑M1/236‑177 (MQ=255)                                                                                                                                                                                                                   ctgGAGCCAAGTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCActgc                                                                                                                                                                                                                                                                    >  1:724773/1‑70 (MQ=255)                                                                                                                                                                                                                       aGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGAt                                                                                                                                                                                                                                                                <  2:724759/70‑1 (MQ=255)                                                                                                                                                                                                                             ttGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCtt                                                                                                                                                       >  1:394246/1‑169 (MQ=255)                                                                                                                                                                                                                                 tGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACtcgtaacgcatatccagcaa                                                                                                                                                                                                                                                              >  1:69505‑M1/1‑42 (MQ=255)                                                                                                                                                                                                                                 tGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACt                                                                                                                                                   <  2:394239/169‑1 (MQ=255)                                                                                                                                                                                                                                   aCGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGAACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTGGGCGTATGGAGCAAGGACTTCTTCGTGAACTTGCTGGATATGCGTAAAGAGTGTAAAGCGACCGACGAACCGAACGCGAGGTTGGAAggaggtggcaga                                       >  2:160123/1‑265 (MQ=255)                                                                                                                                                                                                                                     ggTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACtcgtaacgcatatccagcaagttc                                                                                                                                                                                                                                                          <  2:69504‑M1/62‑25 (MQ=255)                                                                                                                                                                                                                                                 tATCGCGCTCGTCTGAACGTTTCCACCATTGAGTCACTGCTGATCGACAAAg                                                                                                                                                                                                                                                        >  1:502151/1‑52 (MQ=255)                                                                                                                                                                                                                                                   tCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAg                                                                                                                                                                                                                                                        >  1:26906/1‑50 (MQ=255)                                                                                                                                                                                                                                                   tCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGcaca                                                                                                                                                                                                                                                    >  1:436523/1‑54 (MQ=255)                                                                                                                                                                                                                                                     gcgcTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGcaca                                                                                                                                                                                                                                                    <  2:502142/52‑1 (MQ=255)                                                                                                                                                                                                                                                       gcTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGcaca                                                                                                                                                                                                                                                    <  2:26905/50‑1 (MQ=255)                                                                                                                                                                                                                                                       gcTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCaa                                                                                                                                                                                                                                                <  2:436516/54‑1 (MQ=255)                                                                                                                                                                                                                                                              cctcgatttccactcggaacgcatagccagcaagttcacgaagtagtcattgctcaatacgccaacgccgtcagtgaagacgccgtttttgctgccatcgaagttggcacccagtacacgcatgccgcccaccagcgcagtcatttccggcgcggtcagcgtcagttgctgtgctttgtcgatcagcagtgactcggtggtggaaacgtccagacgagcgcgatagttacggaaaccgtcagcaattggctccagcagctcaaacatctcaat              <  2:196143‑M1/267‑261 (MQ=255)                                                                                                                                                                                                                                                                     ttCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTCACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACCTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTCGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGatat                                                                                                 >  2:596497/1‑183 (MQ=255)                                                                                                                                                                                                                                                                      tCCACtcgtaacgcatatccagcaagttcacgaagaagtcattgctcaatacgccaacgc                                                                                                                                                                                                                           <  1:639610‑M1/60‑56 (MQ=255)                                                                                                                                                                                                                                                                        cACtcgtaacgcatatccagcaagttcacgaagaagtcattgctcaatacgccaacgcggtcagtgaagacgccgtttttgctgccatcgaagttggcacccagtacacgcatgccgcccaccagcgcagtcatttccggcgcggtcagcgtcagttgctgtgctttgtcgatcagcagtgactcggtggtggaaacgtccagacgagcgcgatagttacggaaaccgtcagcaattggctccagcagctcaaacatctcaatgtcagtctgatc  <  1:465863‑M1/275‑273 (MQ=255)                                                                                                                                                                                                                                                                         accaccGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGGCTTCTTCGAGAACTTGCTGGATATGCGt                                                                                             <  1:596510/183‑1 (MQ=255)                                                                                                                                                                                                                                                                          ctcgtaacgcatatccagcaagttcacgaagaagtcattgctcaatacgccaacgc                                                                                                                                                                                                                           >  2:637670‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                 GTGAACGCCGCAGCCGTTCGTGCTCTGCCTGTTCTGGAGAAAATCCAGAAAGAGTCTGGTAAAGCCTCGCTGGCGGATATCATAGTGCTGGCTGGTGTGGTTGGTGTTGAGAAAGCCGCAAGCGCCGCAGGTTTGAGCATTCATGTACCGTTTGCGCCGGGTCGCGTTGATGCGCGTCAGGATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGG  >  CP009273/4125266‑4125803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.