New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4125531	43 (1.070)	5 (0.130)	5/296	NT	10.6%	coding (1769/2181 nt)	katG	catalase‑peroxidase HPI, heme b‑containing
	?	CP009273	= 4125717	43 (1.120)					coding (1955/2181 nt)	katG	catalase‑peroxidase HPI, heme b‑containing

GATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAA  >  CP009273/4125446‑4125983                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                           gATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAgtg                                                                                                                                                                                                                                                                         <  1:465863‑M2/275‑4 (MQ=255)             aTTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACGGCGTTGGCGTATTGAGCAATGACTACTTCGTGAACTTGCTGGCTATGCGTTCCGAgtggaaatcgagg                                                                                                                                                                                                                                                               <  2:196143‑M2/273‑14 (MQ=255)                                               aCGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGAACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTGGGCGTATGGAGCAAGGACTTCTTCGTGAACTTGCTGGATATGCGTAAAGAGTGTAAAGCGACCGACGAACCGAACGCGAGGTTGGAAggaggtggcaga                                                                                                                                                                                                                           >  2:160123/1‑265 (MQ=255)                                                                                             gTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGTGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTg                                                                                                                                                                                                            <  1:379225/244‑1 (MQ=255)                                                                                              tCACTGTTGATCGAAAAAGCACAGCAACTGACGGTTACTGCGCCGGAAATGACTGCGCTGGTGGGCGTCATGCGTGTACTGGGGTCCAACTNCGATGGCAGCAAAAACGGCTTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGACGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGtt                                                                                                                                                                            <  1:555357/275‑1 (MQ=255)                                                                                              tCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGtttt                                                                                                                                                                            >  1:130907/1‑275 (MQ=255)                                                                                                 ctgctgATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAgtggaaacgtccagacgagcgcgatagttacggaaaccgtcagcaattggctccagcagc                                                                                                                                                                                                                <  1:107910‑M2/236‑61 (MQ=255)                                                                                                    ctgATCGACACCGTAAAGAACCTGGAGCGGACGGCGCAGGAAATGACTGGGCTGGTGGGCGTGATGGGTGTACTGGGTGACAAGTGCGATGGCAGCAAAAACGGGTTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCGTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTc                                                                                                                                                                      <  2:130906/275‑1 (MQ=255)                                                                                                       aTCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTa                                                                                                                                                                    >  1:211933/1‑274 (MQ=255)                                                                                                                                           gAAATGACTGCGCTGGTGGGCGGCTTGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAg                                                                                                                               <  1:196145/275‑1 (MQ=255)                                                                                                                                                     cgcTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAAAGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGaaa                                                                                                                                                                                                                                                   >  2:490990/1‑149 (MQ=255)                                                                                                                                                         ggtggGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAAAGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTAGAAAGCGACCGACGAATCGAAAGAGc                                                                                                                                                                                                                                               <  1:490999/149‑1 (MQ=255)                                                                                                                                                               cggcATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTg                                                                                                                                                                                                                                             >  1:461726/1‑145 (MQ=255)                                                                                                                                                                  cATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAGGGCCGTGACCNTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGaatgttg                                                                                                        >  1:680459/1‑270 (MQ=255)                                                                                                                                                                   aTGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCg                                                                                                                                                                                                                                         <  2:461719/145‑1 (MQ=255)                                                                                                                                                                      ggggtgcTGGGTGCCAACTTAGAGGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTAGTGGTCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTa                                                                                                     <  2:211931/268‑1 (MQ=255)                                                                                                                                                                       gtgtACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATTCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTaaa                                                                                                   <  1:375738/275‑1 (MQ=255)                                                                                                                                                                        tgtACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGAACGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCTAAGTGAAATTTCCGGCCAGNCGTGCGGATCTGGTGTTTGGTTCTAAATCCGTCCTGCGTCCGGTGGCGGCAGTTTACGCCGGTAGCGATGCCAACGAGAAGATTGTTCAAg                                                                                                  >  1:569647/1‑275 (MQ=255)                                                                                                                                                                              gggTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAATTCAGTCCTGCGAGCGGTGGCGGAAGTTTACGCCCGTAGCGATGCCCACGAGGAGGTTGTTAACGACTTct                                                                                            >  2:713448/1‑274 (MQ=255)                                                                                                                                                                               ggTGCCAACTTCGATGCCAGCAAAAACGACGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGNATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGt                                                                                           >  1:552385/1‑275 (MQ=255)                                                                                                                                                                                 tGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCg                                                                                                                                                              >  1:480617/1‑206 (MQ=255)                                                                                                                                                                                  gCCAACGTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGGTGGCGTATTGAGCAATGACTACTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGACATTTACGGCCAGCCGTGCggcagtggt                                                                                                                                                                               >  2:427716/1‑181 (MQ=255)                                                                                                                                                                                   ccAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGgt                                                                                                                                                                               >  1:255532/1‑187 (MQ=255)                                                                                                                                                                                     aaCTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCt                                                                                                                                                          <  2:480608/206‑1 (MQ=255)                                                                                                                                                                                      aCTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGttt                                                                                                                                                                           <  1:427723/188‑1 (MQ=255)                                                                                                                                                                                       cTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGttt                                                                                                                                                                           <  2:255529/187‑1 (MQ=255)                                                                                                                                                                                       cTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCa                                                                                    <  1:399499/274‑1 (MQ=255)                                                                                                                                                                                                             gTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAAGTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCCGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGAAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTc                                                               >  1:707880/1‑273 (MQ=255)                                                                                                                                                                                                             gTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTg                                                                                                                                                >  1:124218/1‑192 (MQ=255)                                                                                                                                                                                                                 tCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCgg                                                                                                                                            <  2:124217/192‑1 (MQ=255)                                                                                                                                                                                                                          gcgTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAgtgga                                                                                                                                                                                                                                                                       <  1:639610‑M2/60‑6 (MQ=255)                                                                                                                                                                                                                          gcgTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAg                                                                                                                                                                                                                                                                           >  2:637670‑M2/1‑55 (MQ=255)                                                                                                                                                                                                                             ttGGCGTAGTGAGCAATGACTTCTTAGTGAACTTGCTGGATATGCGTTACGAGTGTAAAGCGACCGACGAATCGAAAGCGCTGTTCCAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGTCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACctgctg                                             <  1:442423/275‑1 (MQ=255)                                                                                                                                                                                                                              tGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGc                                                                                                                                                                                                                                                                   <  2:639596/60‑1 (MQ=255)                                                                                                                                                                                                                               gggggaTTGGGCTATGACTTCTTCTTGACTTTGCGTGTTATGCGTTAGGAGTGGAAAGCGAACTTGGAATGGAAAGAGCGGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGGCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTa                                           <  2:680445/270‑1 (MQ=255)                                                                                                                                                                                                                                     ttGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGcga                                                                                                                                                                                                                                                                 >  1:562931/1‑55 (MQ=255)                                                                                                                                                                                                                                      tGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTa                                                                                                                                                                                                     >  2:465108/1‑114 (MQ=255)                                                                                                                                                                                                                                         gCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGcgaccga                                                                                                                                                                                                                                                             <  2:562919/55‑1 (MQ=255)                                                                                                                                                                                                                                          cAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGc                                                                                                                                                                                                 <  1:465115/114‑1 (MQ=255)                                                                                                                                                                                                                                             tGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACgg                                                                                                                                                                                                  >  2:258368/1‑110 (MQ=255)                                                                                                                                                                                                                                             tGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGc                                                                                                                                                                                             >  1:218187/1‑115 (MQ=255)                                                                                                                                                                                                                                             tGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGt                                                                               >  1:658074/1‑225 (MQ=255)                                                                                                                                                                                                                                                 ttcttcGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAg                                                                                                                                                                                              <  1:258371/110‑1 (MQ=255)                                                                                                                                                                                                                                                 ttcttcGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTg                                                                                                                                                                                         <  2:218185/115‑1 (MQ=255)                                                                                                                                                                                                                                                 ttcttcGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGaaa                                                                           <  2:658060/225‑1 (MQ=255)                                                                                                                                                                                                                                                  tcttcGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGcgaccg                                                                                                                                                                                                                                                              >  2:275481/1‑45 (MQ=255)                                                                                                                                                                                                                                                      cGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACcgacga                                                                                                                                                                                                                                                          <  1:275485/45‑1 (MQ=255)                                                                                                                                                                                                                                                         gAACTTGCTGGATATGCGTTACGAgtggaaacgtccagacgagcgcgatagttacggaaacc                                                                                                                                                                                                                                      <  2:69504‑M2/62‑39 (MQ=255)                                                                                                                                                                                                                                                           aCTTGCTGGATATGCGTTACGAgtggaaacgtccagacgagcgcgatagttacggaaaccgtcagcaattggctccagcagctcaaacatctca                                                                                                                                                                                                    <  2:28544‑M2/94‑73 (MQ=255)                                                                                                                                                                                                                                                             ttGCTGGATATGCGTTACGAgtggaaacgtccagacgagcgcgatagttacggaaaccgtca                                                                                                                                                                                                                                  >  1:69505‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                                                               gCTGGATATGCGTTACGAgtggaaacgtccagacgagcgcgatagttacggaaaccgtcagcaattggctccagcagctcaaacatctcaatgt                                                                                                                                                                                                >  1:28545‑M2/1‑18 (MQ=255)                                                                                                                                                                                                                                                               gCTGGATATGCGTTAAGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTAc                                                                                                                                    >  1:522734/1‑154 (MQ=255)                                                                                                                                                                                                                                                                   gATATGTGGTACGAGTGGAAAGCGACCGACGAATCGAAAGGGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCa                                                                                                                                <  2:522725/154‑1 (MQ=255)                                                                                                                                                                                                                                                                         ctttACGGGTGGAAAGGGACCGACGAATCGAAAGAGCTGTTGGAAGGCCGTAACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGAGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGaa  <  1:654431/272‑1 (MQ=255)                                                                                                                                                                                                                                                                             aCGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCCGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAg                                                                                                                                         >  2:348753/1‑135 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                           GATCAGACTGACATTGAGATGTTTGAGCTGCTGGAGCCAATTGCTGACGGTTTCCGTAACTATCGCGCTCGTCTGGACGTTTCCACCACCGAGTCACTGCTGATCGACAAAGCACAGCAACTGACGCTGACCGCGCCGGAAATGACTGCGCTGGTGGGCGGCATGCGTGTACTGGGTGCCAACTTCGATGGCAGCAAAAACGGCGTCTTCACTGACCGCGTTGGCGTATTGAGCAATGACTTCTTCGTGAACTTGCTGGATATGCGTTACGAGTGGAAAGCGACCGACGAATCGAAAGAGCTGTTCGAAGGCCGTGACCGTGAAACCGGCGAAGTGAAATTTACGGCCAGCCGTGCGGATCTGGTGTTTGGTTCTAACTCCGTCCTGCGTGCGGTGGCGGAAGTTTACGCCAGTAGCGATGCCCACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAA  >  CP009273/4125446‑4125983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.