| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1551066 = | 51 (0.920) | 148 (2.680) | 48/134 | 0.0 | 73.5% | coding (185/432 nt) | osmC | lipoyl‑dependent Cys‑based peroxidase, hydroperoxide resistance; salt‑shock inducible membrane protein; peroxiredoxin |
| ? | CP009273 | = 1558208 | 56 (1.010) | coding (1783/2400 nt) | dosP | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator | |||||
Only 100 of 148 total aligned reads displayed.
ATCGGCGGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1551130‑1551066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCC < CP009273/1558208‑1558142 ATCGGCGGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATT > 1:673619/1‑68 GGCGGTGGTATCAATCGATGTTGGCGTGAATACCGGTACCACCAGTAGTAATGAAAGCGCCAATTCCT > 1:843632/1‑68 GGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTg > 1:4268865/1‑67 GGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTC < 1:1671010/68‑1 GGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTC < 1:3299637/68‑1 GGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTC < 1:4398896/68‑1 TGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGC > 1:539638/1‑68 GGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCA < 1:3897018/68‑1 TATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGA < 1:1908393/68‑1 TATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGA < 1:2327952/68‑1 TATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGA < 1:2132919/68‑1 TATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGA < 1:1542873/68‑1 CAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGA > 1:2059602/1‑68 AATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAG < 1:1987655/68‑1 ATCGCTGTTGGCGTGAATCCCGCTTCCCCCACCATTAATGAAACCGCCAATTCCTCTCGCAGAAGAGA < 1:1777568/68‑1 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:1887957/1‑68 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:1859540/1‑68 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:3918886/1‑68 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:3919590/1‑68 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA < 1:1256612/68‑1 ATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:2656065/1‑68 ATCGATGTTGGCGTAAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA > 1:2523105/1‑68 ATCGATGGTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGA < 1:1832383/68‑1 TCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGAT > 1:1583235/1‑68 TCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGAT > 1:247999/1‑68 TCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGAT > 1:4278101/1‑68 TCGATGTTCGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGAT > 1:301082/1‑68 TGTTTGCGTGAATCCCGCTTCCCCCAGCATTAATGAAATCGCCAATTCCTCTCGCAGAAGAGATTGGT < 1:4555946/68‑1 TGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGT > 1:869263/1‑68 TGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGT < 1:1582912/68‑1 TGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGT > 1:1998714/1‑68 TGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGT > 1:3488475/1‑68 GTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTG > 1:3607085/1‑68 TTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGA > 1:2168459/1‑68 TTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGA > 1:2474783/1‑68 TTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGA > 1:3635700/1‑68 TTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGA > 1:1765406/1‑68 TTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGGGA > 1:1520895/1‑68 GGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAA < 1:1484077/68‑1 GCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAAT < 1:2852137/68‑1 GCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAAT < 1:4733362/68‑1 GCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAAATTGGTGAAAT < 1:1011864/68‑1 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGTAATC > 1:1955309/1‑68 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATC > 1:2061554/1‑68 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATC > 1:1356566/1‑68 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATC > 1:3026887/1‑68 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATC > 1:2797956/1‑68 CGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATC > 1:2646461/1‑68 GTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCG < 1:3821572/68‑1 GTGAATCCCGCTTCCACCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCG < 1:248978/68‑1 GTGAATCCCGCTTCACCCAGCATTAATGAAAGCGCCTATTCCTCTCGCAGAAGAGATTGGTGAAATCG < 1:2536163/68‑1 GAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAA < 1:639451/68‑1 GAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAA < 1:3478414/68‑1 ATCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAA < 1:2179455/68‑1 TCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAAT < 1:2451090/68‑1 TCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAAT < 1:3053902/68‑1 TCCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAAT < 1:3585815/68‑1 CCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATA > 1:2917560/1‑68 CCCGCTTCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATA > 1:3785735/1‑68 TCCCCCTGCATTACTGAAAACGCCAACTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGC < 1:873232/68‑1 TCCCCCAGCATTAATGCAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGC < 1:829107/68‑1 TCCCCCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGC < 1:1407839/68‑1 CCAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTG > 1:2335459/1‑68 CAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGG > 1:412632/1‑68 CAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGG < 1:4585587/68‑1 CAGCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATAGTTGAAATCGAAAATATTGGGCGCTGG < 1:3720803/68‑1 GCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGT > 1:545144/1‑68 GCATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGT > 1:1009629/1‑68 ATTAATGAAAGCTCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCA > 1:4608947/1‑68 ATTAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCA > 1:4137595/1‑68 TAATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATC < 1:1025485/68‑1 AATGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCG < 1:1635625/68‑1 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGATATCGAAATTATTGGGCGCTGGGTCTTCGCG > 1:1186291/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:464628/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:1176004/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:4484060/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:1067866/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:4000527/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG < 1:3823228/68‑1 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:2635642/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:272542/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:3384507/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:1971954/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:4330447/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:3889198/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:2595359/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:1437753/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCAGCGCG > 1:4444981/1‑68 TGAAAGCGCCAATTCCTCTCGCAGAAGAGATAGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCG > 1:4102177/1‑68 TGAAAGCGACAATTCCTCTCGCAGAAGAGATTCGTGAAATCGAAAATATTGGGCCCTGGGTCATCGCG > 1:4604746/1‑68 GAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGG > 1:720406/1‑68 GAAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGG > 1:726239/1‑68 AAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGA > 1:1495191/1‑68 AAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGA > 1:4721744/1‑68 AAAGCGCCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGA > 1:3363541/1‑68 CCAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTG > 1:4634840/1‑68 CAATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATCTTGGGCGCTGGGTCATCGCGGAAGCTTGC < 1:324102/68‑1 AATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCC < 1:3656709/68‑1 AATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCC > 1:1043312/1‑68 AATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCC < 1:4278382/68‑1 ATCGGCGGTGGTATCAATCGATGTTGGCGTGAATCCCGCTTCCCCCAGCATTAATGAAAGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1551130‑1551066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTCCTCTCGCAGAAGAGATTGGTGAAATCGAAAATATTGGGCGCTGGGTCATCGCGGAAGCTTGCC < CP009273/1558208‑1558142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |