| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 270860 | NA (NA) | 103 (1.470) | 40/134 | 0.1 | 89.6% | noncoding (320/1221 nt) | IS30 | repeat region |
| ? | CP009273 | = 1104830 | 12 (0.170) | coding (40/1536 nt) | opgG | osmoregulated periplasmic glucan (OPG) biosynthesis periplasmic protein | |||||
Only 100 of 103 total aligned reads displayed.
ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/270794‑270860‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGTTTCATAATTAGTAA < CP009273/1104830‑1104764 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCTTATCAGGGCCTTGTTCGCACCTTCCT > 1:2723860/1‑68ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT < 1:5031712/68‑1ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:3605259/1‑68ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCGTCCT > 1:2564151/1‑68ATGAACCCTGGTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCT > 1:389959/1‑68 TGAACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:2370351/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGCTCTCATATCAGGGCCTTGTTCGCGCCTTCCTT > 1:5395097/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCCCCTTCCTT > 1:5940192/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:2872919/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:6189056/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:2189466/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:6003004/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:5786566/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:950867/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:3318199/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:5282588/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:369629/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:4484811/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:6214428/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTT > 1:1267376/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCAACTTCCTT > 1:4897402/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTACGCCCCTTCCTT > 1:1623912/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCAGATCAGGGACTTGTTCGCACCTTCCTT > 1:2678695/1‑68 TGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTAATATCAGGGACTTGTTCGCACCTTCCTT > 1:5760477/1‑68 GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA < 1:4940571/68‑1 GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTA < 1:1570828/68‑1 AACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAA > 1:1491277/1‑68 ACCCTGTTCTATGGCTCCAGATGAGAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAC > 1:1365386/1‑68 ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAAC < 1:3429072/68‑1 ACCCTGTTCTATGGCTCCAGATGACAAACATCATCTCATATCACGGACTTGATCGCACCTTCCTTAAC < 1:1567304/68‑1 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACA < 1:2956694/68‑1 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACA < 1:1450984/68‑1 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACA < 1:3452493/68‑1 CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACA > 1:5462020/1‑68 CCCAGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAcgt < 1:5266372/68‑4 CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACAT > 1:1551286/1‑68 CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATT < 1:4063078/68‑1 CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATT < 1:3010916/68‑1 CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATT < 1:4453026/68‑1 TTCTATGGCTCCAGAAGACAATCATGATCTCATATCAGTGACTTGTTCGCACCTTCCTTAACATTACT < 1:1892164/68‑1 TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTG > 1:4647559/1‑68 TCTATGGCTCCAGATGACAAACAAGATCTCATATCAGGGACTTGTTCGCCCCTTCCTTAACATTACTG > 1:1699154/1‑68 CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGC > 1:4832871/1‑68 CTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGC > 1:3729773/1‑68 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAG > 1:3980437/1‑68 ATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGGTCGCACCTTCCTTAACATTACTGCAG > 1:3037244/1‑68 TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGC < 1:4903733/68‑1 TGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGC < 1:2266515/68‑1 GGCTCCAGTTGACAAACATGAGCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCA < 1:5850505/68‑1 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCAGCTTCCTTAACATTACTGCAGCA > 1:1190003/1‑68 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCA > 1:2021275/1‑68 GGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCA > 1:3965936/1‑68 GGCTCCAGATGACAAACATGATCTCATATCAGGGACCTGTTCGCACTTTCCTTAACATTACTGCAGCA < 1:4580393/68‑1 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTC > 1:5055129/1‑68 TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTC > 1:2985180/1‑68 TCCAGATGACAAACATGATCTCATATCAGGGAATTGTTCGCACCTTCCTTAACATTACTGCAGCACTC > 1:1562795/1‑68 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAA < 1:422042/68‑1 CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAA < 1:4582313/68‑1 AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAAC < 1:1799827/68‑1 GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACC > 1:5729889/1‑68 TGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAA < 1:1790557/68‑1 TGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTCAACATTACTGCAGCACTCAACCAA > 1:6169869/1‑68 ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACG < 1:687924/68‑1 ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACG < 1:3911706/68‑1 ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATT < 1:812911/68‑1 ATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTT > 1:1144322/1‑68 ATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTT > 1:1557602/1‑68 TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTC > 1:1171237/1‑68 CTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAGCGCATTTTCATCA < 1:3722898/68‑1 CTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCA < 1:6002376/68‑1 CTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCA > 1:2695500/1‑68 CTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCA > 1:2860883/1‑68 CTCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCA < 1:829911/68‑1 TCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCAT > 1:501621/1‑68 TCATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCAT < 1:4268576/68‑1 CATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATT < 1:4049920/68‑1 CATATCAGGGAATTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATT < 1:5931914/68‑1 ATATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTT > 1:4257452/1‑68 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCATCGCATTTTCATCATTTGT > 1:5115479/1‑68 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGT > 1:2001108/1‑68 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGT > 1:2261857/1‑68 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGT > 1:3656241/1‑68 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGT < 1:2395551/68‑1 ATCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGT > 1:415881/1‑68 taAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTA > 1:2591000/3‑68 TCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTA > 1:4385533/1‑68 TCAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTA > 1:5040671/1‑68 ctGGGACATGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAG < 1:4380772/66‑1 CAGTGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAG < 1:2591094/68‑1 CAGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAG > 1:2010723/1‑68 CAGGGACTTGTTCGCACCTGCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAG < 1:5391015/68‑1 tGGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGT < 1:4793908/67‑1 GGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTT > 1:3838235/1‑68 GGGACTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTT > 1:4572579/1‑68 CTTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATG > 1:231490/1‑68 TTGTTCGCACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGT < 1:2998924/68‑1 ACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGTTTCATAAT > 1:3968123/1‑68 ACCTTCCTTAACATTACTGCAGCACTCAACCAACGCATTATCATCATTTGTAGTTTATGATTCATAAT > 1:3235116/1‑68 cagCCTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGTTTCATAATTA < 1:5004570/65‑1 CTTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGTTTCATAATTAGTAA > 1:5883041/1‑68 ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/270794‑270860‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAACATTACTGCAGCACTCAACCAACGCATTTTCATCATTTGTAGTTTATGTTTCATAATTAGTAA < CP009273/1104830‑1104764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |