| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4273257 | 49 (0.700) | 24 (0.350) | 13/132 | 2.1 | 33.3% | coding (1574/1650 nt) | actP | acetate transporter |
| ? | CP009273 | 4273264 = | 48 (0.700) | coding (1567/1650 nt) | actP | acetate transporter | |||||
CGGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4273191‑4273257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAGAGA > CP009273/4273264‑4273326 CGGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACC < 1:1306066/68‑1 TCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCCCCTTCCGCTGA > 1:5513813/1‑68 TCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGA > 1:6191709/1‑68 TCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGA > 1:6071583/1‑68 TCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGA > 1:4508799/1‑68 AACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGT < 1:6065345/68‑1 GCCGGGCTGGGAGCGGATGAACAGCGCGCGGGACAGTACACGCTCACCTTCCGCTGAGTTATCGGTTG > 1:1289338/1‑68 CCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGC < 1:2426540/68‑1 CCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGC < 1:350271/68‑1 AGCGGATAAACTGCGCGCGGAACCGTTCACGCTCACCTTCCGCGGAGTTATCGGTTGCCGAGAAGAAC < 1:6063966/68‑1 AGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAAC > 1:382733/1‑68 AGCGGATAAACTGCGCGCGGAACAGTTCACGCGCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAAC < 1:2190412/68‑1 TAAACTGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATG < 1:3780769/68‑1 TGCGCGCGGAACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAG > 1:206261/1‑68 ACAGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACG < 1:1300023/68‑1 AGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGT < 1:4815768/68‑1 AGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGT < 1:5110315/68‑1 AGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGT < 1:3833601/68‑1 AGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGT < 1:3347440/68‑1 AGTTCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGT < 1:2342827/68‑1 TCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAT < 1:5468638/68‑1 TCACGCTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAT < 1:5943665/68‑1 TCACGCTCACCTACCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAT < 1:3091126/68‑1 CTCACCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAGAGA > 1:4083782/1‑68 CGGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4273191‑4273257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAGAGA > CP009273/4273264‑4273326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |