New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4273257	49 (0.700)	24 (0.350)	13/132	2.1	33.3%	coding (1574/1650 nt)	actP	acetate transporter
	?	CP009273	4273264 =	48 (0.700)					coding (1567/1650 nt)	actP	acetate transporter

TGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAGAGAACAGC  >  CP009273/4273197‑4273331                                                                    |                                                                    tGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGcc                                                                     <  1:2287587/68‑1 (MQ=255) cggccttgctcaacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcacc                                                                     <  1:1306066‑M2/1‑1 (MQ=255)    tCAACGCGAAAGCCGGTCTGGGAGAGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                                  >  1:5937773/1‑68 (MQ=255)    tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                                  >  1:1222241/1‑68 (MQ=255)    tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                                  >  1:5771518/1‑68 (MQ=255)    tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACCCTCACGCGCGCCTTc                                                                  >  1:3487284/1‑68 (MQ=255)       aCGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGc                                                               <  1:2451131/68‑1 (MQ=255)        cGCCTAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACTGTTCACGCTCACGCGCGGCTTCCGCt                                                              <  1:4514880/68‑1 (MQ=255)         gCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTg                                                             >  1:573778/1‑68 (MQ=255)         gCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTg                                                             >  1:5217021/1‑68 (MQ=255)          tcaacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcccCTTCCGCTGa                                                            >  1:5513813‑M2/59‑68 (MQ=255)          tcaacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGa                                                            >  1:6071583‑M2/59‑68 (MQ=255)          tcaacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGa                                                            >  1:4508799‑M2/59‑68 (MQ=255)          tcaacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGa                                                            >  1:6191709‑M2/59‑68 (MQ=255)          ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                            <  1:1768601/68‑1 (MQ=255)          ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                            <  1:3520080/68‑1 (MQ=255)          ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                            <  1:111969/68‑1 (MQ=255)            aacgccaaagccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGAGt                                                          <  1:6065345‑M2/12‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGTAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:1198617/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:5593734/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:6059381/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:4074114/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:4321704/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:3051051/68‑1 (MQ=255)            aaaGCCGGTCTGGGAGCGGATAAACAGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                          <  1:5594088/68‑1 (MQ=255)               gCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCCCGCGCGCCTTCCGCTGAGTTAt                                                       >  1:4218546/1‑68 (MQ=255)                     gccgggctgggagcggatgaacagcgcgcgggacagtacacgctcacCTTCCGCTGAGTTATCGGTTg                                                 >  1:1289338‑M2/48‑68 (MQ=255)                      tGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGc                                                <  1:3025761/68‑1 (MQ=255)                      ccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGAGTTATCGGTTGc                                                <  1:350271‑M2/22‑1 (MQ=255)                      ccggtctgggagcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGAGTTATCGGTTGc                                                <  1:2426540‑M2/22‑1 (MQ=255)                          aGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCTCCTTCCGCTGAGTTATCGGTTGCCgag                                            >  1:3808979/1‑68 (MQ=255)                          aGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgag                                            <  1:4028859/68‑1 (MQ=255)                          aGCGGATAAACTGCGCGCGGAACAGTTAACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgag                                            >  1:1885962/1‑68 (MQ=255)                           gCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCTCGCCTTCCGCTGAGTTATCGGTTGCCgaga                                           <  1:2807523/68‑1 (MQ=255)                           gCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgaga                                           <  1:4429088/68‑1 (MQ=255)                              gATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGagaaga                                        <  1:1305695/68‑1 (MQ=255)                                agcggataaactgcgcgcggaaccgttcacgctcacCTTCCGCGGAGTTATCGGTTGCCGAGAAGAAc                                      <  1:6063966‑M2/32‑1 (MQ=255)                                agcggataaactgcgcgcggaacagttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAAc                                      >  1:382733‑M2/37‑68 (MQ=255)                                agcggataaactgcgcgcggaacagttcacgcgcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAAc                                      <  1:2190412‑M2/32‑1 (MQ=255)                                    cTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGa                                  >  1:1543694/1‑68 (MQ=255)                                     tGCGCGCGGATCAGTTCACGCTCTCGCGCGCCTTCCGCTGAGTTATCTGTTGCCGAGAAGAACCAGAt                                 >  1:5987596/1‑68 (MQ=255)                                     tGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGAt                                 >  1:2641638/1‑68 (MQ=255)                                     tGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGAt                                 >  1:4998063/1‑68 (MQ=255)                                      taaactgcgcgcggaacagttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATg                                <  1:3780769‑M2/38‑1 (MQ=255)                                          tcgGAACAGAACACGCTCACGCGCGCCTTCCTCTGAGTTATCGGTTGCCGAGAATAACCAGATGCCGa                            <  1:5532813/67‑1 (MQ=255)                                          gcgGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGa                            <  1:5460850/68‑1 (MQ=255)                                           tgcgcgcggaacagttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAg                           >  1:206261‑M2/26‑68 (MQ=255)                                           cgGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAg                           <  1:786981/68‑1 (MQ=255)                                            ggAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAgg                          <  1:3533446/68‑1 (MQ=255)                                               aCAGATCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAAt                       <  1:5701176/68‑1 (MQ=255)                                                     cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg                 <  1:5020806/68‑1 (MQ=255)                                                     cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg                 <  1:3425922/68‑1 (MQ=255)                                                     cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg                 <  1:3998355/68‑1 (MQ=255)                                                     cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg                 <  1:4901891/68‑1 (MQ=255)                                                     acagttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg                 <  1:1300023‑M2/53‑1 (MQ=255)                                                       cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACggg               <  1:2839597/68‑2 (MQ=255)                                                       cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:5051904/68‑1 (MQ=255)                                                       cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:1437060/68‑1 (MQ=255)                                                       agttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:4815768‑M2/55‑1 (MQ=255)                                                       agttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:3833601‑M2/55‑1 (MQ=255)                                                       agttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:5110315‑M2/55‑1 (MQ=255)                                                       agttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:3347440‑M2/55‑1 (MQ=255)                                                       agttcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt               <  1:2342827‑M2/55‑1 (MQ=255)                                                        gctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGCACCAGATGCCGCGGAATGCCACGGTg              >  1:1971940/1‑68 (MQ=255)                                                        gctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTg              <  1:1990420/68‑1 (MQ=255)                                                         ctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGa             >  1:1313163/1‑68 (MQ=255)                                                          tcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt            <  1:5468638‑M2/58‑1 (MQ=255)                                                          tcacgctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt            <  1:5943665‑M2/58‑1 (MQ=255)                                                          tcacgctcacCTACCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt            <  1:3091126‑M2/58‑1 (MQ=255)                                                          tcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt            <  1:2374779/68‑1 (MQ=255)                                                          tcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt            <  1:5287927/68‑1 (MQ=255)                                                               ctcacCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAgaga       >  1:4083782‑M2/6‑68 (MQ=255)                                                                    cTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAGAGAGAACAgc  >  1:5456206/1‑68 (MQ=255)                                                                    |                                                                    TGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGATAGAGAACAGC  >  CP009273/4273197‑4273331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.