New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4273257	49 (0.700)	24 (0.350)	13/132	2.1	33.3%	coding (1574/1650 nt)	actP	acetate transporter
	?	CP009273	4273264 =	48 (0.700)					coding (1567/1650 nt)	actP	acetate transporter

CGGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAT  >  CP009273/4273191‑4273321                                                                   |                                                                 cgGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTtcacgctcacg                                                                 <  1:3958643/68‑1 (MQ=255) cgGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACc                                                                 <  1:1306066‑M1/68‑2 (MQ=255)       tGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGcc                                                           <  1:2287587/68‑1 (MQ=255)          tCAACGCGAAAGCCGGTCTGGGAGAGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                        >  1:5937773/1‑68 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCCCcttccgctga                                                        >  1:5513813‑M1/1‑58 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctga                                                        >  1:4508799‑M1/1‑58 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctga                                                        >  1:6071583‑M1/1‑58 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctga                                                        >  1:6191709‑M1/1‑58 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                        >  1:5771518/1‑68 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTc                                                        >  1:1222241/1‑68 (MQ=255)          tCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACCCTCACGCGCGCCTTc                                                        >  1:3487284/1‑68 (MQ=255)            aaCGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctgagt                                                      <  1:6065345‑M1/68‑13 (MQ=255)             aCGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGc                                                     <  1:2451131/68‑1 (MQ=255)              cGCCTAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACTGTTCACGCTCACGCGCGGCTTCCGCt                                                    <  1:4514880/68‑1 (MQ=255)               gCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTg                                                   >  1:5217021/1‑68 (MQ=255)               gCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTg                                                   >  1:573778/1‑68 (MQ=255)                ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                  <  1:1768601/68‑1 (MQ=255)                ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                  <  1:111969/68‑1 (MQ=255)                ccAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGa                                                  <  1:3520080/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGTAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:1198617/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:4074114/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:3051051/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:5593734/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:6059381/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:4321704/68‑1 (MQ=255)                  aaaGCCGGTCTGGGAGCGGATAAACAGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGt                                                <  1:5594088/68‑1 (MQ=255)                     gCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCCCGCGCGCCTTCCGCTGAGTTAt                                             >  1:4218546/1‑68 (MQ=255)                     gCCGGGCTGGGAGCGGATGAACAGCGCGCGGGACAGTACACGCTCACcttccgctgagttatcggttg                                             >  1:1289338‑M1/1‑47 (MQ=255)                      ccGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctgagttatcggttgc                                            <  1:2426540‑M1/68‑23 (MQ=255)                      ccGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctgagttatcggttgc                                            <  1:350271‑M1/68‑23 (MQ=255)                            tGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGc                                      <  1:3025761/68‑1 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACCGTTCACGCTCACcttccgcggagttatcggttgccgagaagaac                                  <  1:6063966‑M1/68‑33 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctgagttatcggttgccgagaagaac                                  >  1:382733‑M1/1‑36 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCTCCTTCCGCTGAGTTATCGGTTGCCgag                                  >  1:3808979/1‑68 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgag                                  <  1:4028859/68‑1 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACAGTTCACGCGCACcttccgctgagttatcggttgccgagaagaac                                  <  1:2190412‑M1/68‑33 (MQ=255)                                aGCGGATAAACTGCGCGCGGAACAGTTAACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgag                                  >  1:1885962/1‑68 (MQ=255)                                 gCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCTCGCCTTCCGCTGAGTTATCGGTTGCCgaga                                 <  1:2807523/68‑1 (MQ=255)                                 gCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCgaga                                 <  1:4429088/68‑1 (MQ=255)                                    gATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGagaaga                              <  1:1305695/68‑1 (MQ=255)                                      tAAACTGCGCGCGGAACAGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatg                            <  1:3780769‑M1/68‑39 (MQ=255)                                          cTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGa                        >  1:1543694/1‑68 (MQ=255)                                           tGCGCGCGGATCAGTTCACGCTCTCGCGCGCCTTCCGCTGAGTTATCTGTTGCCGAGAAGAACCAGAt                       >  1:5987596/1‑68 (MQ=255)                                           tGCGCGCGGAACAGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgag                       >  1:206261‑M1/1‑25 (MQ=255)                                           tGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGAt                       >  1:2641638/1‑68 (MQ=255)                                           tGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGAt                       >  1:4998063/1‑68 (MQ=255)                                                tcgGAACAGAACACGCTCACGCGCGCCTTCCTCTGAGTTATCGGTTGCCGAGAATAACCAGATGCCGa                  <  1:5532813/67‑1 (MQ=255)                                                gcgGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGa                  <  1:5460850/68‑1 (MQ=255)                                                 cgGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAg                 <  1:786981/68‑1 (MQ=255)                                                  ggAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAgg                <  1:3533446/68‑1 (MQ=255)                                                     aCAGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacg             <  1:1300023‑M1/68‑54 (MQ=255)                                                     aCAGATCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAAt             <  1:5701176/68‑1 (MQ=255)                                                       aGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggt           <  1:4815768‑M1/68‑56 (MQ=255)                                                       aGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggt           <  1:2342827‑M1/68‑56 (MQ=255)                                                       aGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggt           <  1:3347440‑M1/68‑56 (MQ=255)                                                       aGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggt           <  1:3833601‑M1/68‑56 (MQ=255)                                                       aGTTCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggt           <  1:5110315‑M1/68‑56 (MQ=255)                                                          tCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggtgat        <  1:5468638‑M1/68‑59 (MQ=255)                                                          tCACGCTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggtgat        <  1:5943665‑M1/68‑59 (MQ=255)                                                          tCACGCTCACctaccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggtgat        <  1:3091126‑M1/68‑59 (MQ=255)                                                           cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg       <  1:3998355/68‑1 (MQ=255)                                                           cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg       <  1:5020806/68‑1 (MQ=255)                                                           cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg       <  1:4901891/68‑1 (MQ=255)                                                           cacgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACg       <  1:3425922/68‑1 (MQ=255)                                                             cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACggg     <  1:2839597/68‑2 (MQ=255)                                                             cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt     <  1:5051904/68‑1 (MQ=255)                                                             cgctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGt     <  1:1437060/68‑1 (MQ=255)                                                              gctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGCACCAGATGCCGCGGAATGCCACGGTg    >  1:1971940/1‑68 (MQ=255)                                                              gctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTg    <  1:1990420/68‑1 (MQ=255)                                                               ctcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGa   >  1:1313163/1‑68 (MQ=255)                                                               cTCACcttccgctgagttatcggttgccgagaagaaccagatgccgaggaatgccacggtgatagaga   >  1:4083782‑M1/1‑5 (MQ=255)                                                                tcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt  <  1:5287927/68‑1 (MQ=255)                                                                tcacgcGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAt  <  1:2374779/68‑1 (MQ=255)                                                                   |                                                                 CGGCCTTGCTCAACGCCAAAGCCGGTCTGGGAGCGGATAAACTGCGCGCGGAACAGTTCACGCTCACGCGCGCCTTCCGCTGAGTTATCGGTTGCCGAGAAGAACCAGATGCCGAGGAATGCCACGGTGAT  >  CP009273/4273191‑4273321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.