New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1124916	35 (0.580)	17 (0.280) +AAA	14/370	2.5	32.4%	coding (411/1209 nt)	mdtH	multidrug efflux pump MdtH
	?	NC_000913	1124917 =	36 (0.580)					coding (410/1209 nt)	mdtH	multidrug efflux pump MdtH

TCGTTGACCATAATTGGCAGCATCAGCATCACTTGTACAG‑CCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGG  >  NC_000913/1124617‑1125237                                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                                                                 tcgtTGACCATAATT‑GCAGCATCAGCATCACTTGTACAG‑CCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCCTTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCAC‑AATA‑GAACTGCCCC‑TGTCGGCGCAGACCGACGGCGGAAGTCGTATTGCAACAGCCAGCTCCCCAAC‑ATGCGCC‑ATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaacgaccacg                                                                                                                                                                                                                                                                                                                                       >  1:136706‑M1/1‑300 (MQ=255)     tGACCATAATTGGCAGCATCAGCATCACTTGTACAG‑CCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATACGAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑c                                                                                                                                                                                                                                                         <  1:136703/380‑1 (MQ=255)                            atcaCTTGTACAGCCCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTG‑CACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccac                                                                                                                                                                                                                                      <  1:136708‑M1/381‑109 (MQ=255)                                                     taACCCGCCAGCGTCAGAACATAGGTGACAAAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑‑TCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACgctgc                                                                                                                                                                                                                                                                                                                              <  1:890298/267‑1 (MQ=255)                                                                    aGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCATCGCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCT‑CCCAACAATGCGCCAATGACCG‑CA‑CGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGa                                                                                                                                                                                                                                                                                                                        >  1:890306/1‑257 (MQ=255)                                                                                     aaCGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATc                                                                                                                                                                                                                                                                               <  1:890305/280‑1 (MQ=255)                                                                                     aaCGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAAC‑ATGCGCCAATGA‑CG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGAt                                                                                                                                                                                                                                                                                >  1:890310/1‑277 (MQ=255)                                                                                       cGCTTGTCACGCATCACGCGGGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACcac                                                                                                                                                                                                                               <  1:136714/322‑1 (MQ=255)                                                                                                cGCATCACGC‑GGGTCATGCCTTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATCAAACAGCG‑AGaaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgc                                                                                                                                                                                                                                                                                        <  1:136715‑M1/267‑59 (MQ=255)                                                                                                         c‑gGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaa                                                                                                                                                                                                                                                                            <  1:136716‑M1/268‑71 (MQ=255)                                                                                                                        cgcgAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGc                                                                                                                                                                                                                                                                   >  1:890313/1‑258 (MQ=255)                                                                                                                        cgcgAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑t                                                                                                                                                                                                                                        >  1:890312/1‑281 (MQ=255)                                                                                                                                ggCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTG‑ACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcag                                                                                                                                                                             <  1:136721‑M1/341‑166 (MQ=255)                                                                                                                                        tACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCCGTGTCGGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAACACGACCACGCTGCTGTGGACGGATTAATTTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCGAAATCCGGGCGGCGCGGCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGt                                                                                                                            >  1:136722/1‑375 (MQ=255)                                                                                                                                                          t‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTG‑CCC‑TGT‑GGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑Aaacaa                                                                                                                                                                                                                                                                        <  1:890314/217‑1 (MQ=255)                                                                                                                                                                  aacaacCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAC‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATCAAAACAACGTGCCACCGAGt                                                                                                                                                                                                                                                           >  1:136724/1‑226 (MQ=255)                                                                                                                                                                    caacCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑a                                                                                                                                                                                                                                                                             <  1:890315/204‑1 (MQ=255)                                                                                                                                                                      acCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTG‑CCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAC‑ACGACCACGCTGCTGTGGACGGATTAA‑‑TTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑c                                                                                                                                                                                                                                                         >  1:136725/1‑220 (MQ=255)                                                                                                                                                                        cACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGtt                                                                                                                                                                                                                  <  1:890317/255‑1 (MQ=255)                                                                                                                                                                                gAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaa                                                                                                                                                                                                                                                                                                                                              <  1:890318‑M1/134‑5 (MQ=255)                                                                                                                                                                                gAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTA‑TGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaaaaaaaaaaacgaccacgctgctgtggacggattaaatttcaccaccagcgccgaacgcggcggatcaaacaaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatccagcatacccggtaaacaaatcatcggtttggcacca                                                                                                                                <  1:136723‑M1/339‑211 (MQ=255)                                                                                                                                                                                      cgcACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCAcc                                                                                                                                                                                                                                                               <  1:890319/201‑1 (MQ=255)                                                                                                                                                                                         acaTAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAACACGACCACGCTGCTGTGGACGGATTAA‑‑TTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGTCCCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑a                                                                                                                                   >  1:136726/1‑314 (MQ=255)                                                                                                                                                                                                   aaTA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATAc                                                                                                                                                               >  1:890324/1‑277 (MQ=255)                                                                                                                                                                                                    aTA‑GAACTGCCCC‑TGTCGGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCT‑CCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCa                                                                                                                                                                  >  1:890325/1‑273 (MQ=255)                                                                                                                                                                                                                    gt‑gGCGCAGACC‑A‑GGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcg                                                                                                                                     <  1:890320‑M1/300‑206 (MQ=255)                                                                                                                                                                                                                                        gaaGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCGAAACGCGG‑CGGATC‑Aaac                                                                                                                                                                                                                                                                          <  1:890327/145‑1 (MQ=255)                                                                                                                                                                                                                                          aGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaacacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggtttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcat                                                                                                                                                          >  1:136728‑M1/1‑77 (MQ=255)                                                                                                                                                                                                                                                 ttGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAat                                                                                                                                                    >  1:890331/1‑247 (MQ=255)                                                                                                                                                                                                                                                 ttGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑‑AAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACCAAAAGCGGTC‑GCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGAC‑GCGGCCCAGCCCATTTGactc                          >  1:136729/1‑362 (MQ=255)                                                                                                                                                                                                                                                   gCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaacacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcg                                                                                                                                      >  1:136730‑M1/1‑68 (MQ=255)                                                                                                                                                                                                                                                   gCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AAT‑C‑GGC‑GCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCaa                                                                                                                      >  1:890333/1‑271 (MQ=255)                                                                                                                                                                                                                                                        gccacgcTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCc‑g                                                                                                                                                                                   <  1:136727/206‑1 (MQ=255)                                                                                                                                                                                                                                                               tCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaacgaccaacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcggc                                                                                                                                   <  1:890334‑M1/263‑208 (MQ=255)                                                                                                                                                                                                                                                                 cccAACAATGCGCCAATGACCG‑CACCGGCAGCTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑Aaac                                                                                                                                                                                                                                                                          <  1:890329/121‑1 (MQ=255)                                                                                                                                                                                                                                                                   caacaaTGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGc                                                                                                                                                                                                                                                                   <  1:890328/126‑1 (MQ=255)                                                                                                                                                                                                                                                                      acaTGCGCCAATGACCGCCACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCGAAG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑t                                                                                                                                                                                                                                                                                                              >  1:890337/3‑84 (MQ=255)                                                                                                                                                                                                                                                                       aaTGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAA‑CACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAat                                                                                                                                                    >  1:890338/1‑223 (MQ=255)                                                                                                                                                                                                                                                                         tGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcggcaattgcaccgccgaaaatacccagaccttgctgaataaattggcg                                                                                        <  1:890330‑M1/296‑251 (MQ=255)                                                                                                                                                                                                                                                                           cgcCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcggcaattgcaccgccgaaaatacccagaccttgctgaataaattggcgta                                                                                   <  1:890332‑M1/299‑256 (MQ=255)                                                                                                                                                                                                                                                                             ccAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggc                                                                                                                                                                                                 <  1:890335‑M1/187‑146 (MQ=255)                                                                                                                                                                                                                                                                               aaTGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccatgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcggc                                                                                                                                      <  1:136731‑M1/244‑205 (MQ=255)                                                                                                                                                                                                                                                                                  gACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGGACA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGttt                                                                                                                                           <  1:890336/223‑1 (MQ=255)                                                                                                                                                                                                                                                                                   aCCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAACACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑‑AAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCg                                                                           >  1:136735/1‑284 (MQ=255)                                                                                                                                                                                                                                                                                          ccGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGGCCGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGGCCA‑TGaaa                                                                                                                                                                                                                                    >  1:890342/1‑133 (MQ=255)                                                                                                                                                                                                                                                                                              cA‑CTGTCCTGCATCAATC‑AACAGCG‑AGaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggc                                                                                                                                                                                                                   <  1:136736‑M1/154‑128 (MQ=255)                                                                                                                                                                                                                                                                                                   gTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGAc                                                                                              >  1:890343/1‑251 (MQ=255)                                                                                                                                                                                                                                                                                                          atc‑atc‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AAT‑C‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑a                                                                                                                                   >  1:890346/1‑206 (MQ=255)                                                                                                                                                                                                                                                                                                           tc‑atc‑aACAGCG‑AGAAAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACcaca                                                                                                                                                                                                                              <  1:890339/121‑1 (MQ=255)                                                                                                                                                                                                                                                                                                              atc‑aACAGCG‑AGaaaaaaaaaacgaccacgctgctgtggacggattaatttcaccaccagcgccgaacgcggcggatcaaacaacgtgccaccgagtcccgagagcaggcatgaaaaccacaatagccacggttcgtgggcgatacccattgtggcgaatccggcggcgcgcatcagcataccggtaacaatcatcggtttggcaccaaagcggtcggcaattgcaccgccgaaaatacc                                                                                                              <  1:890340‑M1/240‑229 (MQ=255)                                                                                                                                                                                                                                                                                                              atc‑aACAGCG‑AG‑‑‑‑AA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATCAAAACAACGTGCCACCGAGT‑CCCGAGAGCAAGG‑CATTGAAAACCACAATAGCCACGGTTCGTGGGCGATA‑CCA‑TGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGTAAACAATCATCGGTTTGGCACC‑AAAGCGGTCGGTAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCggg  <  1:136734/332‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                   aCAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TG‑AAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATAcc                                                                                                   <  1:890341/231‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                      gCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATa                                                                                   >  1:890347/1‑245 (MQ=255)                                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                                                                                 TCGTTGACCATAATTGGCAGCATCAGCATCACTTGTACAG‑CCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑TTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACC‑A‑GGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATC‑ATC‑AACAGCG‑AG‑AAAAA‑ACGACCACGCTGCTGTGGACGGATTAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCAGCATACCGGT‑AACAATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGG  >  NC_000913/1124617‑1125237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.