New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1124916	35 (0.580)	17 (0.280) +AAA	14/370	2.5	32.4%	coding (411/1209 nt)	mdtH	multidrug efflux pump MdtH
	?	NC_000913	1124917 =	36 (0.580)					coding (410/1209 nt)	mdtH	multidrug efflux pump MdtH

TGACCATAATTGGCAGCATCAGCATCACTTGTACAGCCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGG  >  NC_000913/1124621‑1125237                                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                                                      tGACCATAATTGGCAGCATCAGCATCACTTGTACAGCCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATACGAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑c                                                                                                                                                                                                                                                             <  1:136703/380‑1 (MQ=255)                               atcacttgtacagcccagcatgtagtaacccgccagcgtcagaacataggtgacaaaacgcttgcacgcatcacgcgggtcatgccttcgcgaacgggcgtgcgtacggtggagagtttccatgctggtaacaaccacgcattgaacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACcac                                                                                                                                                                                                                                   <  1:136708‑M2/105‑1 (MQ=255)                                                taACCCGCCAGCGTCAGAACATAGGTGACAAAAACGCTTGTCACGCATCACGC‑GGGTCATGCC‑TCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACgctgc                                                                                                                                                                                                                                                                                                                                    <  1:890298/267‑1 (MQ=255)                                                               aGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCATCGCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCT‑CCCAACAATGCGCCAATGACCG‑CA‑CGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGa                                                                                                                                                                                                                                                                                                                              >  1:890306/1‑257 (MQ=255)                                                                                aaCGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATc                                                                                                                                                                                                                                                                                    <  1:890305/280‑1 (MQ=255)                                                                                aaCGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAAC‑ATGCGCCAATGA‑CG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGAt                                                                                                                                                                                                                                                                                     >  1:890310/1‑277 (MQ=255)                                                                                  cGCTTGTCACGCATCACGCGGGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACcac                                                                                                                                                                                                                                   <  1:136714/322‑1 (MQ=255)                                                                                              cgcatcacgcgggtcatgcctttcgcgaacgggcgtgcgtacggtggagagtttccatgctggtaacaaccacgcattgaacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaaacagcgagaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AAcgc                                                                                                                                                                                                                                                                                             <  1:136715‑M2/54‑1 (MQ=255)                                                                                                           cgggtcatgccttcgcgaacgggcgtgcgtacggtggagagtttccatgctggtaacaaccacgcattgaacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑Aaac‑aa                                                                                                                                                                                                                                                                            <  1:136716‑M2/68‑1 (MQ=255)                                                                                                                  cgcgAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGc                                                                                                                                                                                                                                                                       >  1:890313/1‑258 (MQ=255)                                                                                                                  cgcgAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑t                                                                                                                                                                                                                                            >  1:890312/1‑281 (MQ=255)                                                                                                                                ggcgtgcgtacggtggagagtttccatgctggtaacaaccacgcattgacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAg                                                                                                                                                                      <  1:136721‑M2/162‑1 (MQ=255)                                                                                                                                  tACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCCGTGTCGGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAACACGACC‑ACGCTGCTGTGGACGGATT‑AATTTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCGAAATCCGGGCGGCGCGGCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGt                                                                                                                            >  1:136722/1‑375 (MQ=255)                                                                                                                                                    t‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTG‑CCC‑TGT‑GGCGCAGACCAGGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑Aaac‑aa                                                                                                                                                                                                                                                                            <  1:890314/217‑1 (MQ=255)                                                                                                                                                            aacaacCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAC‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATCAAAAC‑AACGTGCCACCGAGt                                                                                                                                                                                                                                                               >  1:136724/1‑226 (MQ=255)                                                                                                                                                              caacCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑a                                                                                                                                                                                                                                                                                  <  1:890315/204‑1 (MQ=255)                                                                                                                                                                acCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTG‑CCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAC‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑‑TTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑c                                                                                                                                                                                                                                                             >  1:136725/1‑220 (MQ=255)                                                                                                                                                                  cACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCG‑AAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑tt                                                                                                                                                                                                                     <  1:890317/255‑1 (MQ=255)                                                                                                                                                                      gaacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtatgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaaaaaaaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATTAAA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCATCCAGCATACCCGGTAAACAAATCATCGGTTTGGCACC‑a                                                                                                                                   <  1:136723‑M2/198‑1 (MQ=255)                                                                                                                                                                              gaacgccgcacatagcacaaatagaactgcccctgtggcgcagaccaggcgaaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaa                                                                                                                                                                                                                                                                                                                                                       <  1:890318‑M2/1‑1 (MQ=255)                                                                                                                                                                                cgcACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCAcc                                                                                                                                                                                                                                                                   <  1:890319/201‑1 (MQ=255)                                                                                                                                                                                   acaTAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAACACGACC‑ACGCTGCTGTGGACGGATT‑AA‑‑TTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGTCCCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑a                                                                                                                                   >  1:136726/1‑314 (MQ=255)                                                                                                                                                                                             aaTA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑c                                                                                                                                                                >  1:890324/1‑277 (MQ=255)                                                                                                                                                                                              aTA‑GAACTGCCCC‑TGTCGGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCT‑CCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCa                                                                                                                                                                    >  1:890325/1‑273 (MQ=255)                                                                                                                                                                                                            gtggcgcagaccaggcgaagtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaaaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCg                                                                                                                              <  1:890320‑M2/197‑1 (MQ=255)                                                                                                                                                                                                                                gaaGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCGAAACGCGG‑CGGATC‑Aaac                                                                                                                                                                                                                                                                               <  1:890327/145‑1 (MQ=255)                                                                                                                                                                                                                                   agtcgtattgcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaAAAAACACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGGTTTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑Aatcat                                                                                                                                                 >  1:136728‑M2/81‑261 (MQ=255)                                                                                                                                                                                                                                         ttGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑Aat                                                                                                                                                    >  1:890331/1‑247 (MQ=255)                                                                                                                                                                                                                                         ttGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑‑AAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACCAAAAGCGGTC‑GCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGAC‑GCGGCCCAGCCCATTTGactc                          >  1:136729/1‑362 (MQ=255)                                                                                                                                                                                                                                           gCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AAT‑C‑GGC‑GCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCaa                                                                                                                      >  1:890333/1‑271 (MQ=255)                                                                                                                                                                                                                                            gcaacagccagctccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaAAAAC‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCg                                                                                                                          >  1:136730‑M2/72‑272 (MQ=255)                                                                                                                                                                                                                                                gccacgcTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCc‑g                                                                                                                                                                                      <  1:136727/206‑1 (MQ=255)                                                                                                                                                                                                                                                        tccccaacaatgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaAAAAA‑ACGACCAACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGc                                                                                                                        <  1:890334‑M2/204‑1 (MQ=255)                                                                                                                                                                                                                                                         cccAACAATGCGCCAATGACCG‑CACCGGCAGCTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑Aaac                                                                                                                                                                                                                                                                               <  1:890329/121‑1 (MQ=255)                                                                                                                                                                                                                                                           caacaaTGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGc                                                                                                                                                                                                                                                                       <  1:890328/126‑1 (MQ=255)                                                                                                                                                                                                                                                              acaTGCGCCAATGACCGCCACCGGCA‑CTGTCCTGCATCATCAACAGCGAAG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑t                                                                                                                                                                                                                                                                                                                   >  1:890337/3‑84 (MQ=255)                                                                                                                                                                                                                                                               aaTGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAA‑CACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑Aat                                                                                                                                                    >  1:890338/1‑223 (MQ=255)                                                                                                                                                                                                                                                                  cgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTa                                                                         <  1:890332‑M2/250‑1 (MQ=255)                                                                                                                                                                                                                                                                   tgcgccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCg                                                                           <  1:890330‑M2/248‑1 (MQ=255)                                                                                                                                                                                                                                                                     ccaatgaccgcaccggcactgtcctgcatcatcaacagcgagaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAACAAACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGc                                                                                                                                                                                               <  1:890335‑M2/141‑1 (MQ=255)                                                                                                                                                                                                                                                                         aatgaccgcaccggcactgtcctgcatcatcaacagcgagaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCA‑TGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGc                                                                                                                        <  1:136731‑M2/202‑1 (MQ=255)                                                                                                                                                                                                                                                                          gACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGGACA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGttt                                                                                                                                           <  1:890336/223‑1 (MQ=255)                                                                                                                                                                                                                                                                           aCCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAACACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑‑AAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCg                                                                           >  1:136735/1‑284 (MQ=255)                                                                                                                                                                                                                                                                                  ccGGCA‑CTGTCCTGCATCATCAACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGGCCGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGGCCA‑TGaaa                                                                                                                                                                                                                                        >  1:890342/1‑133 (MQ=255)                                                                                                                                                                                                                                                                                      cactgtcctgcatcaatcaacagcgagaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGc                                                                                                                                                                                                              <  1:136736‑M2/125‑1 (MQ=255)                                                                                                                                                                                                                                                                                           gTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGAc                                                                                              >  1:890343/1‑251 (MQ=255)                                                                                                                                                                                                                                                                                                  atcatcAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AAT‑C‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑a                                                                                                                                   >  1:890346/1‑206 (MQ=255)                                                                                                                                                                                                                                                                                                   tcatcaACAGCG‑AGAAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACcaca                                                                                                                                                                                                                                  <  1:890339/121‑1 (MQ=255)                                                                                                                                                                                                                                                                                                   atcaacagcgagaaaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATAcc                                                                                                   <  1:890340‑M2/224‑1 (MQ=255)                                                                                                                                                                                                                                                                                                     atcaACAGCG‑AG‑‑‑‑AA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATCAAAAC‑AACGTGCCACCGAGT‑CCCGAGAGCAAGG‑CATTGAAAACCACAATAGCCACGG‑TTCGTGGGCGATA‑CCA‑TGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGTAAAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGTAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCggg  <  1:136734/332‑1 (MQ=255)                                                                                                                                                                                                                                                                                                         aCAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TG‑AAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATAcc                                                                                                   <  1:890341/231‑1 (MQ=255)                                                                                                                                                                                                                                                                                                            gCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATa                                                                                   >  1:890347/1‑245 (MQ=255)                                                                                                                                                                                                                                                                                                                aaaAAAAA‑ACGACC‑ACGCTGCTGTGGACGGA‑T‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATaa                                                                                  <  1:890351‑M2/240‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                   aaaaa‑aCGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AAT‑C‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCt                                                                                        >  1:890349/1‑234 (MQ=255)                                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                                                      TGACCATAATTGGCAGCATCAGCATCACTTGTACAGCCAGCATGTAGTAACCCGCCAGCGTCAGAACATAGGTGAC‑AAAACGCTTGTCACGCATCACGC‑GGGTCATGCCTTCGCGAACGGGCGTGCGTACGGTGGAGAGTTTCCAT‑GCTGGTAACAACCACGCATTGAACGCCGCACATAGCACAAATA‑GAACTGCCCC‑TGT‑GGCGCAGACCAGGCGAAAGTCGTATTGCAACAGCCAGCTCCCCAACAATGCGCCAATGACCG‑CACCGGCA‑CTGTCCTGCATCATCAACAGCG‑AG‑AAAAA‑ACGACC‑ACGCTGCTGTGGACGGATT‑AA‑TTTCACCACCAGCGCCG‑AACGCGG‑CGGATC‑AAAC‑AACGTGCCACCGAGT‑CCCGAGAGC‑AGG‑CA‑TGAAAACCACAATAGCCACGG‑TTCGTGGGCGATACCCATTGTGGCG‑AATCC‑GGCGGCGC‑GCAT‑CAGCATA‑CCGGT‑AAC‑AATCATCGGTTTGGCACC‑AAAGCGGTCGGCAATTGCACCGCCGAAAATACCCAGACCTTGCTGAATAAATTGGCGTAGACCGAGAGCAATACCGACCATGACGGCGGCCCAGCCCATTTGATCAACGAAGCGGATAGAGATCAGCGGG  >  NC_000913/1124621‑1125237

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.