Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_000913	2,980,730	Δ3 bp	intergenic (‑95/+32)	ygeA ← / ← araE	amino acid racemase/arabinose:H(+) symporter

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2980729	NA (NA)	19 (0.310)	16/388	2.3	NA	intergenic (‑94/+35)	ygeA/araE	amino acid racemase/arabinose:H(+) symporter
	?	NC_000913	2980733 =	NA (NA)					intergenic (‑98/+31)	ygeA/araE	amino acid racemase/arabinose:H(+) symporter

GCGCCCGCCCGCTGTAAGCCAA‑G‑CGCCGCCT‑CAGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGA  >  NC_000913/2980409‑2980999                                                                                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                     cgccccgcccgCTGCAAGCCAACGCCGCCGCCTCCAGCCAGAACTGTCCCCGGTTTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATTCCCC‑AGCTCATTCC‑TCCCCAGC‑AAACC‑AA‑‑‑TG‑TTTTCA‑TTCCTCTCTCCCTGATGTGTG‑TTACCGCAACAA‑GCT‑GAATAAGGAACGAG‑ACAAAACGCCTCAAACGGCCAAAGT‑G‑CCCAATCTCTA‑TTAAACGAA‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATcgcccgt                                                                                                                                                                                                                                                             <  1:503173/357‑7 (MQ=255)                 aGCCAA‑G‑CGCCGCCT‑CAGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCCAAGCTCATTCC‑T‑CCCAGC‑AAACC‑AAT‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCCAAAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AAGG‑‑Agccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgt                                                                                                                                                                                                        >  1:503181‑M1/1‑309 (MQ=255)                                    aGCCAGAA‑TGTCCCCGGTTTTTATCCCATTCCCCGCGACGCTGGCAACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTGTTTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑‑TG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTCAAACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCGGCCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACATTTTTTGG‑TTTCCGGAATGAGCCAG‑aagt                                                                                                                                                  <  1:503178/422‑3 (MQ=255)                                    aGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTA‑TTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAGTTGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑G‑‑Agccggatgtacagcacatccggcccg                                                                                                                                                                                                                                                                            >  1:503182‑M1/1‑289 (MQ=255)                                      ccAGAA‑TGTCCCCGGTTTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑‑TG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑ACAAAACGCCTC‑AACGGCCAAAGT‑G‑CCCAATCTCTA‑TT‑AACG‑a‑aa‑a‑‑a                                                                                                                                                                                                                                                                                                      <  1:503179/289‑1 (MQ=255)                                       cAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑a‑aa‑a‑‑aaa                                                                                                                                                                                                                                                                                                    <  1:1380396/288‑2 (MQ=255)                                                                   ccccGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAAT‑AGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑‑ACG‑A‑AAGG‑‑Agccggatgtacagcacatccggcccgtgaaatcagcgccgatatttctcaactctcgcctgccatcagtttgcgttcgatatgttccagcgtgaca                                                                                                                                                                                                      >  1:503188‑M1/1‑259 (MQ=255)                                                                                       ttctATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AG‑‑‑‑‑‑‑‑‑‑G‑AGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACa                                                                                                                                                                                 >  1:503191/1‑342 (MQ=255)                                                                                       ttctATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑‑CC‑AGCTCATTCC‑T‑CCCAGC‑AAACCAAA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AG‑‑‑‑‑‑‑‑‑‑G‑AGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGc                                                                                                                                                                                       >  1:503192/1‑336 (MQ=255)                                                                                          tATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Aggccggatgtacagcacatccggcccgtgaaatcagacgccgatattt                                                                                                                                                                                                                                                      >  1:1380407‑M1/1‑238 (MQ=255)                                                                                            tttCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑AGGAgccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgaca                                                                                                                                                                                                    >  1:503193‑M1/1‑238 (MQ=255)                                                                                              tCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑gg                                                                                                                                                                                                                                                                                  >  1:1380409/1‑242 (MQ=255)                                                                                                                          cTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAA‑GGTGGATTCCCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑a‑aa‑a‑‑a                                                                                                                                                                                                                                                                                                      <  1:1380410/206‑1 (MQ=255)                                                                                                                            tGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACG‑TAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TT‑CCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Agccggatgtacagcacatcggccccgtgaaatcagacgccgatattttctcaacttctcgcctgcctcagttgcgtttcgatatgttccagcgt                                                                                                                                                                                                        >  1:1380413‑M1/1‑202 (MQ=255)                                                                                                                                        aaGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCCAAAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑AGGAgccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacatttttggtttccggaatgagccaga                                                                                                                                                                           >  1:503196‑M1/1‑196 (MQ=255)                                                                                                                                                caAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACG‑TAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑AGGAgccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagttttgcgttcgatatgttc                                                                                                                                                                                                             >  1:503198‑M1/1‑186 (MQ=255)                                                                                                                                                 aaGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACCAAA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑AGGAgccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacatttttggtttccggaatgagccagaaagta                                                                                                                                                                      >  1:503199‑M1/1‑187 (MQ=255)                                                                                                                                                 aaGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑tt                                                                                                                                                                      >  1:1380416/1‑294 (MQ=255)                                                                                                                                                 aaGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑‑TTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Agccggatgtacagcacatcggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgtttcgatatgttccagcgtgacatttttggtt                                                                                                                                                                                           >  1:1380415‑M1/1‑183 (MQ=255)                                                                                                                                                        gttttaaatgccttCATTTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAGAAC‑AAACGCCTC‑AACGGCC‑AAGT‑GCCCCAATCTCTA‑TT‑AACG‑A‑AAGA‑‑Ggccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacattttttggtttccggaatgagccagaagtaatgcccacaacgcaatgttcagcgcagtgtagagccagaacgtaccggcagcgc                                                                                                                >  1:503201‑M1/7‑182 (MQ=255)                                                                                                                                                             tAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGtt                                                                                                                                                                                                     >  1:1380417/1‑253 (MQ=255)                                                                                                                                                                      cA‑TTTATCAAACG‑TAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTGTTTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAAT‑AGGAACGAG‑AC‑‑AACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AG‑G‑‑Agccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacatttttggtttccggaatg                                                                                                                                                                                  >  1:503202‑M1/1‑162 (MQ=255)                                                                                                                                                                       a‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGAc                                                                                                                                                                                  >  1:1380418/1‑262 (MQ=255)                                                                                                                                                                       a‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACa                                                                                                                                                                                 >  1:1380419/1‑263 (MQ=255)                                                                                                                                                                                aaCGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGCAAAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Aggccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtga                                                                                                                                                                                                     >  1:1380422‑M1/1‑156 (MQ=255)                                                                                                                                                                                aaCGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑‑TTGCGTTCGATATGTTCCAGCGTGa                                                                                                                                                                                   >  1:1380421/1‑252 (MQ=255)                                                                                                                                                                                                 gtggATT‑CCC‑AGCTCATTCCTT‑CCCAGC‑AAACC‑AAATTTGTTTTTCATTTCCTCTCT‑CCTGATGTGTGTTTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTATTT‑AACG‑A‑AA‑A‑‑AAAAAAAAAAAGGAGGCCGGG‑ATGTACAGCACATCCGGCCCGTCGAAATCAGACGCCGATATTTTCTCAACTTCTCGCCTGCCATCAGTTTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGGTTTTCCGGAATGAGCCAGAAAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTag                                                                                                            >  1:503203/1‑326 (MQ=255)                                                                                                                                                                                                                     cc‑t‑ccCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AG‑‑‑‑‑‑‑‑‑‑A‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑Caa                                                                                                                              >  1:503206/1‑267 (MQ=255)                                                                                                                                                                                                                     cc‑t‑ccCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACAt                                                                                                                                                                                                                                                                    >  1:1380424/1‑140 (MQ=255)                                                                                                                                                                                                                     cc‑t‑ccCAGC‑AAACC‑AA‑‑TTG‑‑TTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Aggcggatgtacagcactcgcccgtgaatcagacgccgatatttctcaacttctcgcctgccatcagttcgttcgatatgttccagcgtgacatttttggttccggaatgagccagaaagtaatgc                                                                                                                                                                         >  1:1380425‑M1/1‑119 (MQ=255)                                                                                                                                                                                                                                             g‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCa                                                                                          >  1:1380426/1‑285 (MQ=255)                                                                                                                                                                                                                                                   cA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑ACAAAACGCCTC‑AA‑GGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑GCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACATTTTTTGG‑TTTCCGGAATGAGCCAG‑AAAG‑AATGCCCACAAAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGAAAg                                                            <  1:503205/308‑1 (MQ=255)                                                                                                                                                                                                                                                    a‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACGAA‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTAcc                                                                                              <  1:1380423/271‑1 (MQ=255)                                                                                                                                                                                                                                                      ttCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑ACAAAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACAT‑CGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGa  <  1:503207/365‑1 (MQ=255)                                                                                                                                                                                                                                                                            ttACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TTAAACG‑A‑AA‑A‑‑AAAG‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCGGCCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTtctc                                                                                                                                                                                                                          <  1:503208/139‑1 (MQ=255)                                                                                                                                                                                                                                                                            ttACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Agccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagttgcgttcgatatgttccagcgtgacaattttttggtttccggaatgagccagaaagtaatgcccacaaacgcaatgttcagcgcagtgtagagccagaacgtaccggcagcgccaatgctatcaagcagtgtcaggaaggtcgcgccgata                                                                        >  1:1380428‑M1/1‑75 (MQ=255)                                                                                                                                                                                                                                                                                cGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑G‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GCCG‑GG‑ATGTACAGCACATCCGGCCCGTCGAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACGCCAATGTTCAAGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGAt                                                 >  1:503210/1‑297 (MQ=255)                                                                                                                                                                                                                                                                                    acaaGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GGTATGTACAGCACATCCGGCCCGT‑GAAATCacg                                                                                                                                                                                                                                                 >  1:1380429/1‑104 (MQ=255)                                                                                                                                                                                                                                                                                     caaGGCTAGAATAAGGAACGAG‑ACAAAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACGAA‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑CCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑‑TTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAgg                                                               <  1:1380427/274‑1 (MQ=255)                                                                                                                                                                                                                                                                                      aaGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Aggcgatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagttgcgttcgatatgttccagcgtgacatttttggtttccggaatgagccagaaagtaatgcccacaaacgcaatgttcagcgcagtgtagagccagaacgtaccggcagcgccaatgctatcaagcagtgtcaggaaggtcgcgccgataatcatattcgacacc                                                            >  1:1380431‑M1/1‑65 (MQ=255)                                                                                                                                                                                                                                                                                                tAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑Ggaccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagttttgcgttcgatatgttccagcgtgacatttttggtttccggaatgtgccagaaagtaatgcccacaaacgcaatgttcagcgcagtgtagagccagaacgtaccggcagcgccaat                                                                                                         >  1:1380438‑M1/1‑56 (MQ=255)                                                                                                                                                                                                                                                                                                tAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCgg                                                                                                                                                                 >  1:1380437/1‑171 (MQ=255)                                                                                                                                                                                                                                                                                                                aaCGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCACAAAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGAt                                                 <  1:1380434/262‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                 aCGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑‑‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGt                                                                                                                                                                                     >  1:1380441/1‑137 (MQ=255)                                                                                                                                                                                                                                                                                                                     cTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑AGGAgccggatgtacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacatttttggtttccggaatgagccagaaagtaatgcc                                                                                                                                                                 >  1:503212‑M1/1‑39 (MQ=255)                                                                                                                                                                                                                                                                                                                          aCGGCA‑AAGT‑G‑CCCAATCTCTA‑‑T‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑ttttttg                                                                                                                                                                         <  1:1380435/136‑3 (MQ=255)                                                                                                                                                                                                                                                                                                                           cGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑a                                                                                                                                                     <  1:1380436/154‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                            ggCC‑AAGTCG‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACAT‑CGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCgg                                                                                                                                                                 <  1:503211/146‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                            ggCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑AGGC‑G‑‑Aggctggtgacagcacatccggcccgtgaaatcagacgccgatatttctcaacttctcgcctgccatcagtttgcgttcgatatgttccagcgtgacattttttggtttccggaatgagccagaaagtaatgcccacaacgcaatgtt                                                                                                                                                   >  1:503213‑M1/1‑32 (MQ=255)                                                                                                                                                                                                                                                                                                                               c‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATC‑‑G‑‑CGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑‑AAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCgt                         <  1:1380440/270‑1 (MQ=255)                                                                                                                                                                                                                                                                                                                                                            a‑aa‑a‑‑aa‑‑‑‑‑‑‑‑‑‑G‑GG‑C‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAGTTTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCata                                          >  1:1380444/1‑235 (MQ=255)                                                                                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                     GCGCCCGCCCGCTGTAAGCCAA‑G‑CGCCGCCT‑CAGCCAGAA‑TGTCCCCGG‑TTTTATCCCATTCCCCGCGACGCTGGC‑ACTCTTCTATTTCATGAAAATCGACGCTATGTAGCAGCACTTGCGCAGAG‑TGAAGCCCACCAAGCCGCTG‑TTTAATGCCTTCA‑TTTATCAAACGATAGTAAGGAATGGTGGATT‑CCC‑AGCTCATTCC‑T‑CCCAGC‑AAACC‑AA‑‑TTG‑TTTTCA‑TTCCTCTCT‑CCTGATGTGTG‑TTACCGCAACAAGGCT‑GAATAAGGAACGAG‑AC‑AAACGCCTC‑AACGGCC‑AAGT‑G‑CCCAATCTCTA‑TT‑AACG‑A‑AA‑A‑‑AA‑‑‑‑‑‑‑‑‑‑G‑GGCC‑GG‑ATGTACAGCACATCCGGCCCGT‑GAAATCAGACGCCGATA‑TTTCTCAACTTCTCGCCTGCCATCAG‑TTTGCGTTCGATATGTTCCAGCGTGACA‑TTTTTGG‑TTTCCGGAATGAGCCAG‑AAAGTAATGCCCAC‑AAACG‑CAATGTTC‑AGCGCAGTGTAGAGCCAGAACGTACCGGCAGCGCCAATGCTATCAAGCAGTGTCAGGAAGGTCGCGCCGATAATCATATTCGACACCCAGTTCGTGGTGGTCGAACAGGTAATACCGA  >  NC_000913/2980409‑2980999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.